Genome sequence of Candidatus Arsenophonus lipopteni, the exclusive symbiont of a blood sucking fly Lipoptena cervi (Diptera: Hippoboscidae).

abstract：:Desulfurobacterium thermolithotrophum L'Haridon et al. 1998 is the type species of the genus Desulfurobacterium which belongs to the family Desulfurobacteriaceae. The species is of interest because it represents the first thermophilic bacterium that can act as a primary producer in the temperature range of 45-75 °C (o...

journal_title：Standards in genomic sciences

authors： Göker M,Daligault H,Mwirichia R,Lapidus A,Lucas S,Deshpande S,Pagani I,Tapia R,Cheng JF,Goodwin L,Pitluck S,Liolios K,Ivanova N,Mavromatis K,Mikhailova N,Pati A,Chen A,Palaniappan K,Han C,Land M,Hauser L,Pan C,

更新日期：2011-12-31 00:00:00

abstract：:The type strain of the prospective 10.1601/nm.30737 sp. nov. ERR11T, was isolated from a nodule of the leguminous tree Erythrina brucei native to Ethiopia. The type strain 10.1601/nm.1463 10.1601/strainfinder?urlappend=%3Fid%3DCCBAU+10071 T, was isolated from the nodules of Lespedeza cuneata in Beijing, China. The gen...

journal_title：Standards in genomic sciences

authors： Aserse AA,Woyke T,Kyrpides NC,Whitman WB,Lindström K

更新日期：2017-12-05 00:00:00

abstract：:Spirosoma linguale Migula 1894 is the type species of the genus. S. linguale is a free-living and non-pathogenic organism, known for its peculiar ringlike and horseshoe-shaped cell morphology. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is only the th...

journal_title：Standards in genomic sciences

authors： Lail K,Sikorski J,Saunders E,Lapidus A,Glavina Del Rio T,Copeland A,Tice H,Cheng JF,Lucas S,Nolan M,Bruce D,Goodwin L,Pitluck S,Ivanova N,Mavromatis K,Ovchinnikova G,Pati A,Chen A,Palaniappan K,Land M,Hauser L,C

更新日期：2010-03-30 00:00:00

abstract：:Lutibacter profundi LP1T within the family Flavobacteriaceae was isolated from a biofilm growing on the surface of a black smoker chimney at the Loki's Castle vent field, located on the Arctic Mid-Ocean Ridge. The complete genome of L. profundi LP1T is the first genome to be published within the genus Lutibacter. L. p...

journal_title：Standards in genomic sciences

authors： Wissuwa J,Bauer SL,Steen IH,Stokke R

更新日期：2017-01-07 00:00:00

abstract：:Kurthia senegalensis strain JC8E(T) sp. nov. is the type strain of K. senegalensis sp. nov., a new species within the genus Kurthia. This strain, whose genome is described here, was isolated from the fecal flora of a healthy patient. K. senegalensis is an aerobic rod. Here we describe the features of this organism, to...

journal_title：Standards in genomic sciences

authors： Roux V,Lagier JC,Gorlas A,Robert C,Raoult D

更新日期：2014-02-20 00:00:00

abstract：:Streptobacillus moniliformis Levaditi et al. 1925 is the type and sole species of the genus Streptobacillus, and is of phylogenetic interest because of its isolated location in the sparsely populated and neither taxonomically nor genomically much accessed family 'Leptotrichiaceae' within the phylum Fusobacteria. The '...

journal_title：Standards in genomic sciences

authors： Nolan M,Gronow S,Lapidus A,Ivanova N,Copeland A,Lucas S,Del Rio TG,Chen F,Tice H,Pitluck S,Cheng JF,Sims D,Meincke L,Bruce D,Goodwin L,Brettin T,Han C,Detter JC,Ovchinikova G,Pati A,Mavromatis K,Mikhailova N,C

更新日期：2009-12-30 00:00:00

abstract：:This report presents the permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, an obligate anaerobic hyperthermophilic crenarchaeon that was isolated from acidic hot springs in Hveravellir, Iceland. D. mobilis utilizes peptides as carbon and energy sources and reduces elemental sulfur to H2S...

journal_title：Standards in genomic sciences

authors： Susanti D,Johnson EF,Lapidus A,Han J,Reddy TB,Pilay M,Ivanova NN,Markowitz VM,Woyke T,Kyrpides NC,Mukhopadhyay B

更新日期：2016-01-13 00:00:00

abstract：:A strain of a hyperthermophilic filamentous archaeon was isolated from a sample of Kamchatka hot spring sediment. Isolate 1807-2 grew optimally at 85 °C, pH 6.0-6.5, the parameters being close to those at the sampling site. 16S rRNA gene sequence analysis placed the novel isolate in the crenarchaeal genus Thermofilum;...

journal_title：Standards in genomic sciences

authors： Toshchakov SV,Korzhenkov AA,Samarov NI,Mazunin IO,Mozhey OI,Shmyr IS,Derbikova KS,Taranov EA,Dominova IN,Bonch-Osmolovskaya EA,Patrushev MV,Podosokorskaya OA,Kublanov IV

更新日期：2015-12-09 00:00:00

abstract：:Strain HIMB11 is a planktonic marine bacterium isolated from coastal seawater in Kaneohe Bay, Oahu, Hawaii belonging to the ubiquitous and versatile Roseobacter clade of the alphaproteobacterial family Rhodobacteraceae. Here we describe the preliminary characteristics of strain HIMB11, including annotation of the draf...

journal_title：Standards in genomic sciences

authors： Durham BP,Grote J,Whittaker KA,Bender SJ,Luo H,Grim SL,Brown JM,Casey JR,Dron A,Florez-Leiva L,Krupke A,Luria CM,Mine AH,Nigro OD,Pather S,Talarmin A,Wear EK,Weber TS,Wilson JM,Church MJ,DeLong EF,Karl DM,Stew

更新日期：2014-03-15 00:00:00

abstract：:Halomonas zhanjiangensis Chen et al. 2009 is a member of the genus Halomonas, family Halomonadaceae, class Gammaproteobacteria. Representatives of the genus Halomonas are a group of halophilic bacteria often isolated from salty environments. The type strain H. zhanjiangensis JSM 078169(T) was isolated from a sea urchi...

journal_title：Standards in genomic sciences

authors： Zhou Y,Li R,Gao XY,Lapidus A,Han J,Haynes M,Lobos E,Huntemann M,Pati A,Ivanova NN,Rohde M,Mavromatis K,Tindall BJ,Markowitz V,Woyke T,Klenk HP,Kyrpides NC,Li WJ

更新日期：2014-04-11 00:00:00

abstract：:Litoreibacter arenae Kim et al. 2012 is a member of the genomically well-characterized Rhodobacteraceae clade within the Roseobacter clade. Representatives of this clade are known to be metabolically versatile and involved in marine carbon-producing and biogeochemical processes. They form a physiologically heterogeneo...

journal_title：Standards in genomic sciences

authors： Riedel T,Fiebig A,Petersen J,Gronow S,Kyrpides NC,Göker M,Klenk HP

更新日期：2013-10-01 00:00:00

abstract：:Methanoplanus petrolearius Ollivier et al. 1998 is the type strain of the genus Methanoplanus. The strain was originally isolated from an offshore oil field from the Gulf of Guinea. Members of the genus Methanoplanus are of interest because they play an important role in the carbon cycle and also because of their sign...

journal_title：Standards in genomic sciences

authors： Brambilla E,Djao OD,Daligault H,Lapidus A,Lucas S,Hammon N,Nolan M,Tice H,Cheng JF,Han C,Tapia R,Goodwin L,Pitluck S,Liolios K,Ivanova N,Mavromatis K,Mikhailova N,Pati A,Chen A,Palaniappan K,Land M,Hauser L,Ch

更新日期：2010-10-27 00:00:00

abstract：:Mesorhizobium loti strain NZP2037 was isolated in 1961 in Palmerston North, New Zealand from a Lotus divaricatus root nodule. Compared to most other M. loti strains, it has a broad host range and is one of very few M. loti strains able to form effective nodules on the agriculturally important legume Lotus pedunculatus...

journal_title：Standards in genomic sciences

authors： Kelly S,Sullivan J,Ronson C,Tian R,Bräu L,Davenport K,Daligault H,Erkkila T,Goodwin L,Gu W,Munk C,Teshima H,Xu Y,Chain P,Woyke T,Liolios K,Pati A,Mavromatis K,Markowitz V,Ivanova N,Kyrpides N,Reeve W

更新日期：2014-12-08 00:00:00

abstract：:Halorubrum lacusprofundi is an extreme halophile within the archaeal phylum Euryarchaeota. The type strain ACAM 34 was isolated from Deep Lake, Antarctica. H. lacusprofundi is of phylogenetic interest because it is distantly related to the haloarchaea that have previously been sequenced. It is also of interest because...

journal_title：Standards in genomic sciences

authors： Anderson IJ,DasSarma P,Lucas S,Copeland A,Lapidus A,Del Rio TG,Tice H,Dalin E,Bruce DC,Goodwin L,Pitluck S,Sims D,Brettin TS,Detter JC,Han CS,Larimer F,Hauser L,Land M,Ivanova N,Richardson P,Cavicchioli R,DasSar

更新日期：2016-09-10 00:00:00

abstract：:Hydrogenobacter thermophilus Kawasumi et al. 1984 is the type species of the genus Hydrogenobacter. H. thermophilus was the first obligate autotrophic organism reported among aerobic hydrogen-oxidizing bacteria. Strain TK-6(T) is of interest because of the unusually efficient hydrogen-oxidizing ability of this strain,...

journal_title：Standards in genomic sciences

authors： Zeytun A,Sikorski J,Nolan M,Lapidus A,Lucas S,Han J,Tice H,Cheng JF,Tapia R,Goodwin L,Pitluck S,Liolios K,Ivanova N,Mavromatis K,Mikhailova N,Ovchinnikova G,Pati A,Chen A,Palaniappan K,Ngatchou-Djao OD,Land M,Ha

更新日期：2011-04-29 00:00:00

abstract：:Bacteroides coprosuis Whitehead et al. 2005 belongs to the genus Bacteroides, which is a member of the family Bacteroidaceae. Members of the genus Bacteroides in general are known as beneficial protectors of animal guts against pathogenic microorganisms, and as contributors to the degradation of complex molecules such...

journal_title：Standards in genomic sciences

authors： Land M,Held B,Gronow S,Abt B,Lucas S,Del Rio TG,Nolan M,Tice H,Cheng JF,Pitluck S,Liolios K,Pagani I,Ivanova N,Mavromatis K,Mikhailova N,Pati A,Tapia R,Han C,Goodwin L,Chen A,Palaniappan K,Hauser L,Brambilla E

更新日期：2011-04-29 00:00:00

abstract：:Chryseobacterium bovis DSM 19482T (Hantsis-Zacharov et al., Int J Syst Evol Microbiol 58:1024-1028, 2008) is a Gram-negative, rod shaped, non-motile, facultative anaerobe, chemoorganotroph bacterium. C. bovis is a member of the Flavobacteriaceae, a family within the phylum Bacteroidetes. It was isolated when psychroto...

journal_title：Standards in genomic sciences

authors： Laviad-Shitrit S,Göker M,Huntemann M,Clum A,Pillay M,Palaniappan K,Varghese N,Mikhailova N,Stamatis D,Reddy TBK,Daum C,Shapiro N,Markowitz V,Ivanova N,Woyke T,Klenk HP,Kyrpides NC,Halpern M

更新日期：2017-05-08 00:00:00

abstract：:A lytic bacteriophage RG-2014 infecting a biofilm forming multidrug resistant bacterium Delftia tsuruhatensis strain ARB-1 as its host was isolated from a full-scale municipal wastewater treatment plant. Lytic phage RG-2014 was isolated for developing phage based therapeutic approaches against Delftia tsuruhatensis st...

journal_title：Standards in genomic sciences

authors： Bhattacharjee AS,Motlagh AM,Gilcrease EB,Islam MI,Casjens SR,Goel R

更新日期：2017-12-18 00:00:00

abstract：:Methylibium sp. strain T29 was isolated from a gasoline-contaminated aquifer and proved to have excellent capabilities in degrading some common fuel oxygenates like methyl tert-butyl ether, tert-amyl methyl ether and tert-butyl alcohol along with other organic compounds. Here, we report the draft genome sequence of M....

journal_title：Standards in genomic sciences

authors： Szabó Z,Gyula P,Robotka H,Bató E,Gálik B,Pach P,Pekker P,Papp I,Bihari Z

更新日期：2015-07-19 00:00:00

abstract：:Herein, we report the draft-genome sequences and annotation of two opportunistic pathogenic strains of Staphylococcus cohnii isolated from humans. One strain (SC-57) was isolated from blood from a male patient in May 2006 and the other (SC-532) from a catheter from a male patient in June 2006. Similar to other genomes...

journal_title：Standards in genomic sciences

authors： Mendoza-Olazarán S,Garcia-Mazcorro JF,Morfín-Otero R,Villarreal-Treviño L,Camacho-Ortiz A,Rodríguez-Noriega E,Bocanegra-Ibarias P,Maldonado-Garza HJ,Dowd SE,Garza-González E

更新日期：2017-08-31 00:00:00

abstract：:Burkholderia sp. strain WSM2230 is an aerobic, motile, Gram-negative, non-spore-forming acid-tolerant rod isolated from acidic soil collected in 2001 from Karijini National Park, Western Australia, using Kennedia coccinea (Coral Vine) as a host. WSM2230 was initially effective in nitrogen-fixation with K. coccinea, bu...

journal_title：Standards in genomic sciences

authors： Walker R,Watkin E,Tian R,Bräu L,O'Hara G,Goodwin L,Han J,Lobos E,Huntemann M,Pati A,Woyke T,Mavromatis K,Markowitz V,Ivanova N,Kyrpides N,Reeve W

更新日期：2013-12-31 00:00:00

abstract：:Polynucleobacter necessarius subsp. asymbioticus strain QLW-P1DMWA-1(T) is a planktonic freshwater bacterium affiliated with the family Burkholderiaceae (class Betaproteobacteria). This strain is of interest because it represents a subspecies with cosmopolitan and ubiquitous distribution in standing freshwater systems...

journal_title：Standards in genomic sciences

authors： Meincke L,Copeland A,Lapidus A,Lucas S,Berry KW,Del Rio TG,Hammon N,Dalin E,Tice H,Pitluck S,Richardson P,Bruce D,Goodwin L,Han C,Tapia R,Detter JC,Schmutz J,Brettin T,Larimer F,Land M,Hauser L,Kyrpides NC,Iva

更新日期：2012-03-19 00:00:00

abstract：:Escherichia coli is the most abundant facultative anaerobic bacteria in the gastro-intestinal tract of mammals but can be responsible for intestinal infection due to acquisition of virulence factors. Genomes of pathogenic E. coli strains are widely described whereas those of bovine commensal E. coli strains are very s...

journal_title：Standards in genomic sciences

authors： Segura A,Auffret P,Klopp C,Bertin Y,Forano E

更新日期：2017-10-10 00:00:00

abstract：:The family Hyphomonadaceae within the Alphaproteobacteria is largely comprised of bacteria isolated from marine environments with striking morphologies and an unusual mode of cell growth. Here, we report the complete genome sequence Hirschia baltica, which is only the second a member of the Hyphomonadaceae with a publ...

journal_title：Standards in genomic sciences

authors： Chertkov O,Brown PJ,Kysela DT,de Pedro MA,Lucas S,Copeland A,Lapidus A,Del Rio TG,Tice H,Bruce D,Goodwin L,Pitluck S,Detter JC,Han C,Larimer F,Chang YJ,Jeffries CD,Land M,Hauser L,Kyrpides NC,Ivanova N,Ovchinnik

更新日期：2011-12-31 00:00:00

abstract：:Ferroglobus placidus belongs to the order Archaeoglobales within the archaeal phylum Euryarchaeota. Strain AEDII12DO is the type strain of the species and was isolated from a shallow marine hydrothermal system at Vulcano, Italy. It is a hyperthermophilic, anaerobic chemolithoautotroph, but it can also use a variety of...

journal_title：Standards in genomic sciences

authors： Anderson I,Risso C,Holmes D,Lucas S,Copeland A,Lapidus A,Cheng JF,Bruce D,Goodwin L,Pitluck S,Saunders E,Brettin T,Detter JC,Han C,Tapia R,Larimer F,Land M,Hauser L,Woyke T,Lovley D,Kyrpides N,Ivanova N

更新日期：2011-10-15 00:00:00

abstract：:Strain 3.5.1 was isolated from soils of the Republic of Tatarstan, Russia, on the basis of presence of a high phytate-degrading activity. Strains with such activities attract special interest because of its potential use as feed additives and natural manures. Strain 3.5.1 harbors a 99 % 16S rRNA nucleotide sequence si...

journal_title：Standards in genomic sciences

authors： Suleimanova AD,Toymentseva AA,Boulygina EA,Kazakov SV,Mardanova AM,Balaban NP,Sharipova MR

更新日期：2015-11-11 00:00:00

abstract：:Rhizobium leguminosarum bv. trifolii SRDI943 (strain syn. V2-2) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Trifolium michelianum Savi cv. Paradana that had been grown in soil collected from a mixed pasture in Victoria, Australia. This isolate was found to have a...

journal_title：Standards in genomic sciences

authors： Reeve W,Drew E,Ballard R,Melino V,Tian R,De Meyer S,Brau L,Ninawi M,Daligault H,Davenport K,Erkkila T,Goodwin L,Gu W,Munk C,Teshima H,Xu Y,Chain P,Kyrpides N

更新日期：2013-12-15 00:00:00

abstract：:Weeksella virosa Holmes et al. 1987 is the sole member and type species of the genus Weeksella which belongs to the family Flavobacteriaceae of the phylum Bacteroidetes. Twenty-nine isolates, collected from clinical specimens provided the basis for the taxon description. While the species seems to be a saprophyte of t...

journal_title：Standards in genomic sciences

authors： Lang E,Teshima H,Lucas S,Lapidus A,Hammon N,Deshpande S,Nolan M,Cheng JF,Pitluck S,Liolios K,Pagani I,Mikhailova N,Ivanova N,Mavromatis K,Pati A,Tapia R,Han C,Goodwin L,Chen A,Palaniappan K,Land M,Hauser L,Cha

更新日期：2011-02-22 00:00:00

abstract：:We report the genome of a Staphylococcus aureus strain (ILRI_Eymole1/1) isolated from a nasal swab of a dromedary camel (Camelus dromedarius) in North Kenya. The complete genome sequence of this strain consists of a circular chromosome of 2,874,302 bp with a GC-content of 32.88 %. In silico annotation predicted 2755 p...

journal_title：Standards in genomic sciences

authors： Zubair S,Fischer A,Liljander A,Meens J,Hegerman J,Gourlé H,Bishop RP,Roebbelen I,Younan M,Mustafa MI,Mushtaq M,Bongcam-Rudloff E,Jores J

更新日期：2015-11-20 00:00:00

abstract：:Methanoculleus bourgensis strain MAB1 has been identified as the hydrogenotrophic partner of mesophilic acetate-oxidising bacteria, a syntrophic relationship operating close to the thermodynamic equilibrium and of considerable importance in ammonia-rich engineered biogas processes. Methanoculleus bourgensis strain MAB...

journal_title：Standards in genomic sciences

authors： Manzoor S,Schnürer A,Bongcam-Rudloff E,Müller B

更新日期：2016-10-12 00:00:00