Rapid Identification of Measles Virus Vaccine Genotype by Real-Time PCR.

Abstract:

:During measles outbreaks, it is important to be able to rapidly distinguish between measles cases and vaccine reactions to avoid unnecessary outbreak response measures such as case isolation and contact investigations. We have developed a real-time reverse transcription-PCR (RT-PCR) method specific for genotype A measles virus (MeV) (MeVA RT-quantitative PCR [RT-qPCR]) that can identify measles vaccine strains rapidly, with high throughput, and without the need for sequencing to determine the genotype. We have evaluated the method independently in three measles reference laboratories using two platforms, the Roche LightCycler 480 system and the Applied Biosystems (ABI) 7500 real-time PCR system. In comparison to the standard real-time RT-PCR method, the MeVA RT-qPCR showed 99.5% specificity for genotype A and 94% sensitivity for both platforms. The new assay was able to detect RNA from five currently used vaccine strains, AIK-C, CAM-70, Edmonston-Zagreb, Moraten, and Shanghai-191. The MeVA RT-qPCR assay has been used successfully for measles surveillance in reference laboratories, and it could be readily deployed to national and subnational laboratories on a wide scale.

journal_name

J Clin Microbiol

authors

Roy F,Mendoza L,Hiebert J,McNall RJ,Bankamp B,Connolly S,Lüdde A,Friedrich N,Mankertz A,Rota PA,Severini A

doi

10.1128/JCM.01879-16

subject

Has Abstract

pub_date

2017-03-01 00:00:00

pages

735-743

issue

3

eissn

0095-1137

issn

1098-660X

pii

JCM.01879-16

journal_volume

55

pub_type

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