The methylation of nuclear and mitochondrial DNA in ageing phenotypes and longevity.

Abstract:

:An increasing body of data is progressively indicating that the comprehension of the epigenetic landscape, actively integrated with the genetic elements, is crucial to delineate the molecular basis of the inter-individual complexity of ageing process. Indeed, it has emerged that DNA methylation changes occur during ageing, consisting mainly in a progressive process of genome demethylation, in a hypermethylation of gene-specific CpG dinucleotides, as well as in an inter-individual divergence of the epigenome due to stochastic events and environmental exposures throughout life, namely as epigenetic drift. Additionally, it has also come to light an implication of the mitochondrial genome in the regulation of the intracellular epigenetic landscape, as demonstrated by the being itself object of epigenetic modifications. An overview of DNA methylation changes occurring during ageing process at both nuclear and mitochondrial level will be described in this review, also taking into account the recent and promising data available on the 5-hydroxymethylcytosine.

journal_name

Mech Ageing Dev

authors

Bacalini MG,D'Aquila P,Marasco E,Nardini C,Montesanto A,Franceschi C,Passarino G,Garagnani P,Bellizzi D

doi

10.1016/j.mad.2017.01.006

subject

Has Abstract

pub_date

2017-07-01 00:00:00

pages

156-161

issue

Pt B

eissn

0047-6374

issn

1872-6216

pii

S0047-6374(16)30239-1

journal_volume

165

pub_type

杂志文章,评审
  • Resistance to silica-induced lung fibrosis in senescent rats: role of alveolar macrophages and tumor necrosis factor-alpha (TNF).

    abstract::The purpose of the present study was to investigate the effect of aging on silica-induced lung toxicity. In young animals silica induced a significant increase in bronchoalveolar lavage tumor necrosis factor-alpha (TNF), lactate dehydrogenase as well as in cell numbers, which correlate with increased collagen depositi...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2003.11.002

    authors: Corsini E,Giani A,Peano S,Marinovich M,Galli CL

    更新日期:2004-02-01 00:00:00

  • Endotoxin-induced liver injury in aged and subacutely hypervitaminotic A rats.

    abstract::The plasma disappearance of endotoxin and endotoxin-induced hepatic injury were studied in two rat models: the aging rat and the subacutely hypervitaminotic A rat. The choice of these models was based on their respective association with a decreased or increased Kupffer cell endocytic activity. The half-life of endoto...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(87)90044-3

    authors: Hendriks HF,Horan MA,Durham SK,Earnest DL,Brouwer A,Hollander CF,Knook DL

    更新日期:1987-12-01 00:00:00

  • Control of lifespan by food bacteria, nutrient limitation and pathogenicity of food in C. elegans.

    abstract::The increased lifespan caused by food limitation has been observed in a wide range of animals including the nematode Caenorhabditis elegans. We show here that the lifespans of eat-2 and eat-5 feeding-defective mutants and a mutant of dbl-1 encoding a TGFβ ligand significantly change between the cultures fed on Escheri...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2011.02.005

    authors: So S,Tokumaru T,Miyahara K,Ohshima Y

    更新日期:2011-04-01 00:00:00

  • Genetic differences in hepatic lipid peroxidation potential and iron levels in mice.

    abstract::Oxidative damage to macromolecules, including lipids, has been hypothesized as a mechanism of aging. One end product of lipid peroxidation, malondialdehyde (MDA), is often quantified as a measure of oxidative damage to lipids. We used a commercial colorimetric assay for MDA (Bioxytech LPO-586, Oxis International, Port...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/s0047-6374(01)00329-3

    authors: Gerhard GS,Kaufmann EJ,Wang X,Erikson KM,Abraham J,Grundy M,Beard JL,Chorney MJ

    更新日期:2002-01-01 00:00:00

  • The (un)balance between metabolic and oxidative abnormalities and cellular compensatory responses in Alzheimer disease.

    abstract::Compelling evidence supports the importance of metabolic abnormalities in Alzheimer disease pathogenesis. Indeed, that oxidative mechanisms are involved in the neuropathology associated with Alzheimer disease is evidenced by the large number of metabolic signs of oxidative stress as well as by specific markers of oxid...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/j.mad.2006.01.024

    authors: Moreira PI,Zhu X,Lee HG,Honda K,Smith MA,Perry G

    更新日期:2006-06-01 00:00:00

  • The social implications of an ageing population. Introduction.

    abstract::The growing proportion of older people, especially the very old, is often thought of in negative terms such as the need for more health care. But the implications are wider and affect the future of family care as well as issues of intergenerational relations, employment, living arrangements and attitudes. This paper l...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/s0047-6374(01)00418-3

    authors: Tinker A

    更新日期:2002-04-01 00:00:00

  • Age-related increases in mitogenic responses and natural immunity to a syngeneic fibrosarcoma in rats.

    abstract::An increase in natural (innate) immunity with age (through 65 weeks) of NBR rats to a syngeneic methylcholanthrene-induced fibrosarcoma (MCA) is described. This increase is characterized by the appearance of spontaneous tumor regressor animals and an increase in the incidence of tumor non-takes by rats 45 weeks of age...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(81)90129-9

    authors: Hollingsworth MA,Barrowclough J,Evans DL

    更新日期:1981-09-01 00:00:00

  • Structure of cristae in cardiac mitochondria of aged rat.

    abstract::Interfibrillar mitochondria (IFM) of the heart in aged Fischer 344 rats show a biochemical defect which might be reflected in their morphology. We examined by high resolution scanning electron microscopy over 5500 mitochondria to determine if a concomitant structural alteration existed. This methodology provides a mea...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2006.09.002

    authors: Riva A,Tandler B,Lesnefsky EJ,Conti G,Loffredo F,Vazquez E,Hoppel CL

    更新日期:2006-12-01 00:00:00

  • Using the Gompertz-Strehler model of aging and mortality to explain mortality trends in industrialized countries.

    abstract::Mortality trends in industrialized countries are characterized by declines in vascular disease (ischemic heart disease and stroke) and rises in cancers and degenerative diseases. These trends are typically analyzed by examining each disorder in isolation using the perspective of genetic and environmental influences. H...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(92)90037-e

    authors: Riggs JE,Millecchia RJ

    更新日期:1992-09-01 00:00:00

  • Effects of long-term, low-dose growth hormone therapy on immune function and life expectancy of mice.

    abstract::We have studied effects of long-term, low-dose growth hormone therapy on the immune function and life expectancy of Balb/c mice. Sixty male Balb/c mice were aged up to the time when they started showing signs of senescence and causal death (deaths started when they became 17 months old). The aged mice were divided int...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(91)90026-v

    authors: Khansari DN,Gustad T

    更新日期:1991-01-01 00:00:00

  • Aggrecan expression is substantially and abnormally upregulated in Hutchinson-Gilford Progeria Syndrome dermal fibroblasts.

    abstract::Hutchinson-Gilford Progeria syndrome (HGPS) is a rare genetic disorder that displays features of segmental aging. It is manifested predominantly in connective tissue, with most prominent histological changes occurring in the skin, cartilage, bone and cardiovascular tissues. Detailed quantitative real time reverse-tran...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2006.03.004

    authors: Lemire JM,Patis C,Gordon LB,Sandy JD,Toole BP,Weiss AS

    更新日期:2006-08-01 00:00:00

  • Related age changes in the elastase and lipid contents of normal and hemiplegic subjects of various ages.

    abstract::Elastase and lipid levels of the plasmas of subjects and of those who have suffered a stroke have been measured, and it has been shown that the normal age related fall in elastase content is mirrored more closely by the fall in high density lipoprotein cholesterol than by changes in total cholesterol. After a stroke a...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(80)90003-2

    authors: Hall DA,Elridi SS,Zajac A,Middleton RS

    更新日期:1980-11-01 00:00:00

  • Measurement of the molecular weight distributions in human muscular deoxyribonucleic acid.

    abstract::Highly purified DNA has been prepared from human muscle tissue and treated with three different single-strand specific desoxyribonucleases. The molecular weight of treated individual DNA molecules was determined by length measurements. Average DNA molecular weights and their standard deviations were correlated to the ...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(83)90089-1

    authors: Zahn RK

    更新日期:1983-07-01 00:00:00

  • Amplification of extrachromosomal small circular DNAs in a murine model of accelerated senescence. A brief note.

    abstract::Extrachromosomal circular DNA complexes from peripheral blood lymphocytes from inbred mice of accelerated senescence, were detected by mica-press-adsorption method. In senescence-resistant series (SAM-R), polydisperse circular DNAs were observed at 7 weeks of age and a restricted size class of small circular forms of ...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(85)90051-x

    authors: Yamagishi H,Kunisada T,Takeda T

    更新日期:1985-01-01 00:00:00

  • Effect of donor age on long-term culture of bone marrow in vitro.

    abstract::Previous reports suggest that 33 degrees C is the optimum temperature for the long-term culture of murine bone marrow in vitro. We found that horse serum was an important variable determining our ability to culture marrow from immature (less than 10 weeks) mice at 37 degrees C. While some batches supported growth othe...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(84)90179-9

    authors: Lipschitz DA,Udupa KB

    更新日期:1984-01-01 00:00:00

  • Mitochondria-targeted redox probes as tools in the study of oxidative damage and ageing.

    abstract::Mitochondrial reactive oxygen species (ROS) and oxidative damage are associated with a range of age-related human pathologies. It is also likely that mitochondrial ROS generation is a factor in stress response and signal transduction pathways. However, current methods for measuring and influencing mitochondrial ROS pr...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/j.mad.2005.03.026

    authors: James AM,Cochemé HM,Murphy MP

    更新日期:2005-09-01 00:00:00

  • The Caenorhabditis elegans nicotinamidase PNC-1 enhances survival.

    abstract::In yeast, increasing the copy number of the nicotinamide adenine dinucleotide (NAD)-dependent deacetylase Sir2 extends lifespan, which can be inhibited by nicotinamide (Nam), the end-product of Sir2-mediated NAD-breakdown. Furthermore, the yeast pyrazinamidase/nicotinamidase PNC-1 can extend yeast lifespan by converti...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2007.01.004

    authors: van der Horst A,Schavemaker JM,Pellis-van Berkel W,Burgering BM

    更新日期:2007-04-01 00:00:00

  • Calcium sensitivity of myocardial actomyosin ATPase in young and mature male Fischer rats. A brief note.

    abstract::Although myocardial actomyosin ATPase specific activity determined at Ca2+ levels of 1 x 10(-3) to 1 x 10(-2) M is consistently higher in two-month old male Fischer rats than in twelve-month old individuals, this difference can be eliminated if the enzyme is assayed at lower calcium concentrations. This suggests that ...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(78)90040-4

    authors: Rockstein M,Chesky JA,Lopez T

    更新日期:1978-12-01 00:00:00

  • Calorie restriction improves aging-induced impairment of cognitive function in relation to deregulation of corticosterone status and brain regional GABA system.

    abstract::Aging is known to affect adversely the corticosterone status and the brain function including cognition. Calorie restricted (CR) diet has been found to improve brain aging. The objective of the present investigation is to study the effect of short-term CR diet without any food deprivation on aging-induced impairment o...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2020.111248

    authors: Chakraborty A,Banerjee S,Mukherjee B,Poddar MK

    更新日期:2020-07-01 00:00:00

  • Amyloid precursor protein, heat-shock proteins, and Bcl-2 form a complex in mitochondria and modulate mitochondria function and apoptosis in N2a cells.

    abstract::Neurons that degenerate in the brains of persons with Alzheimer's disease accumulate mitochondrial amyloid precursor protein (APP), which is thought to negatively affect mitochondrial function and cellular homeostasis. Because proteins that enter mitochondria require assistance from chaperone proteins, we hypothesized...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2009.07.002

    authors: Yang TT,Hsu CT,Kuo YM

    更新日期:2009-09-01 00:00:00

  • Role of DNA methylation in human age prediction.

    abstract::DNA methylation (DNAm) is a fundamental biochemical modification which occurs over the lifespan of an individual and it is a significant component in the aging process. Methylation level of CpG sites plays an important role in finding the age of a person. Different approaches were used to extract age-related CpG (AR-C...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/j.mad.2017.08.012

    authors: Goel N,Karir P,Garg VK

    更新日期:2017-09-01 00:00:00

  • With mouse age comes wisdom: A review and suggestions of relevant mouse models for age-related conditions.

    abstract::Ageing is a complex multifactorial process that results in many changes in physiological changes processes that ultimately increase susceptibility to a wide range of diseases. As such an ageing population is resulting in a pressing need for more and improved treatments across an assortment of diseases. Such treatments...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/j.mad.2016.07.005

    authors: Drechsler S,Lynch MA,Novella S,González-Navarro H,Hecimovic S,Barini E,Tucci V,Castro RE,Vandenbroucke RE,Osuchowski M,Potter PK

    更新日期:2016-12-01 00:00:00

  • Studying the cerebellar DNA damage response in the tissue culture dish.

    abstract::The cerebellum is exquisitely sensitive to deficiencies in the cellular response to specific DNA lesions. Genetic disorders caused by such deficiencies involve relentless, progressive cerebellar atrophy with striking loss of Purkinje and granule neurons. The reason for the extreme sensitivity of these cells to defecti...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2013.04.001

    authors: Tzur-Gilat A,Ziv Y,Mittelman L,Barzilai A,Shiloh Y

    更新日期:2013-10-01 00:00:00

  • Effect of aging on human plasma growth hormone response to clonidine.

    abstract::The effect of the oral administration of 0.150 mg/m2 clonidine on the plasma level of human growth hormone (hGH) was studied in 53 adults (25 males and 28 females) aged from 28 to 68 years, of which 15 were healthy volunteers and 38 were hypertensive. Both the normal and hypertensive subjects of both sexes showed an a...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(84)90086-1

    authors: Gil-Ad I,Gurewitz R,Marcovici O,Rosenfeld J,Laron Z

    更新日期:1984-09-01 00:00:00

  • Cyclodextrin modulation of T lymphocyte signal transduction with aging.

    abstract::There is an alteration of the immune response in aging that leads to the increased incidence of infections, cancers and autoimmune disorders. The aim of the present study was to investigate whether there exists changes in signal transduction under the IL-2 receptor stimulation and the role of plasma membrane cholester...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/s0047-6374(01)00274-3

    authors: Fülöp T Jr,Douziech N,Goulet AC,Desgeorges S,Linteau A,Lacombe G,Dupuis G

    更新日期:2001-09-15 00:00:00

  • The capability for regulation of insulin secretion by somatostatin in purified pancreatic islet B cells during aging.

    abstract::Pancreatic islet B cells from Sprague-Dawley and Fisher 344 rats aged 3-27 months were separated from A and D cells by centrifugation over a linear percoll density gradient, and incubated in vitro with various concentrations of glucose and somatostatin. Elevation of glucose concentration in the incubation medium from ...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(86)90022-9

    authors: Magal E,Chaudhuri M,Adelman RC

    更新日期:1986-01-01 00:00:00

  • Altered T cell signalling in ageing.

    abstract::T cell responses are altered in the aged in a manner usually interpreted as detrimental to host defences against infectious agents and possibly also against cancer. T cell dysregulation may be caused by any or a combination of stem cell deficits, compromised T cell differentiation, inefficient antigen processing and p...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/s0047-6374(01)00290-1

    authors: Pawelec G,Hirokawa K,Fülöp T

    更新日期:2001-09-30 00:00:00

  • Replicative potential and the duration of the cell cycle in human fibroblasts: coordinate stimulation by epidermal growth factor.

    abstract::The in vitro replicative potential of human diploid fibroblasts can be increased by polypeptide growth factors such as epidermal growth factor (EGF). Also, the cycle time of EGF-stimulated cells is, on average, decreased and their mitotic cell volume is reduced. Therefore, the regulation of cell size by the duration o...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(92)90139-5

    authors: Angello JC

    更新日期:1992-01-01 00:00:00

  • Age associated increase of single-stranded regions in the DNA of mouse brain and liver cells.

    abstract::The touch smears of brain cells and hepatocytes of young and senescent mice were stained with antibody to cytidine nucleoside by an indirect immunofluorescence technique and subsequently combined with fluorescence cresyl violet staining of DNA. Nuclear binding of the antibody which reacts only with denatured or single...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(79)90041-1

    authors: Nakanishi K,Shima A,Fukuda M,Fujita S

    更新日期:1979-05-01 00:00:00

  • Effects of calorie restriction on the age-dependent accumulation of mutations in the small intestine of lacZ-transgenic mice.

    abstract::To understand the effect of calorie restriction on genome maintenance systems, the age-dependent accumulation of mutations in animals maintained on high and low calorie diets was examined using lacZ-transgenic mice. Mice were fed a diet of 95 kcal/w or 65 kcal/w from 2 to 17 months of age. The mutation frequencies in ...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2011.01.004

    authors: He D,Uehara Y,Furuya M,Ikehata H,Komura J,Yamauchi K,Kakinuma S,Shang Y,Shimada Y,Ootsuyama A,Norimura T,Ono T

    更新日期:2011-03-01 00:00:00