Complete genome of biodegradable plastics-decomposing Roseateles depolymerans KCTC 42856(T) (=61A(T)).

Abstract:

:Roseateles depolymerans is a Gram-negative, rod-shaped, flagellated, obligately aerobic, photosynthetic bacterium that was isolated from the Hanamuro River, Ibaraki Prefecture, Japan. Here, we report the complete genome of R. depolymerans KCTC 42856(T) (=61A(T)=DSM 11813(T)=CCUG 48747(T)=NCIMB 13588(T)), which consists of 5,681,722bp (G+C content of 66.57%) with a single chromosome, 4,773 protein-coding genes, 57 tRNAs and 4 rRNA operons. Several genes related to degradation of aliphatic and aromatic polymers were detected in the genome that help explain how the strain mediates decomposition of biodegradable plastics into fragments which are then assimilated and subsequently metabolized by microbial cells.

journal_name

J Biotechnol

journal_title

Journal of biotechnology

authors

Lee SH,Choe H,Kim SG,Park DS,Nasir A,Kim BK,Kim KM

doi

10.1016/j.jbiotec.2016.01.012

subject

Has Abstract

pub_date

2016-02-20 00:00:00

pages

47-8

eissn

0168-1656

issn

1873-4863

pii

S0168-1656(16)30014-1

journal_volume

220

pub_type

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