Comparative analysis of the gut microbiota in centenarians and young adults shows a common signature across genotypically non-related populations.

Abstract:

:Gut microbiota is among the factors that may be involved in healthy aging. Broader and geographically spread studies on gut microbiota of centenarians can help in identifying a common signature of longevity. We identified an endogamous Indian population with high centenarian prevalence. Here, we compared the gut microbiota composition and fecal metabolites of a centenarians group (˜100 years) with young people (25-45 years) of the region with the high centenarian prevalence and the nearby region of low centenarian prevalence to decipher microbial-related longevity signatures. Also, we compared our results with publicly available datasets of similar groups including 125 centenarians from three countries (Italy, Japan, China). Our comparative analysis resulted in higher biodiversity within Ruminococcaceae in centenarians, with respect to younger adults, irrespective of their nationality. We observed bacterial signatures that are common among extremely old people of different nationality. Comparative metabolites profiling identified the fecal metabolic signature of extreme aging in the Indian study population. Our analysis of the co-occurrence network and bimodal distribution of several taxa suggested the establishment of a pervasive change in the gut ecology during extreme aging. Our study might pave the way to develop gut microbiota based biomarkers for healthy aging.

journal_name

Mech Ageing Dev

authors

Tuikhar N,Keisam S,Labala RK,Imrat,Ramakrishnan P,Arunkumar MC,Ahmed G,Biagi E,Jeyaram K

doi

10.1016/j.mad.2019.02.001

subject

Has Abstract

pub_date

2019-04-01 00:00:00

pages

23-35

eissn

0047-6374

issn

1872-6216

pii

S0047-6374(18)30205-7

journal_volume

179

pub_type

杂志文章
  • Programmed aging or error catastrophe? An examination by two-dimensional polyacrylamide gel electrophoresis.

    abstract::We have examined newly synthesized proteins in the young adult and in older populations of the nematode Caenorhabditis elegans using two-dimensional polyacrylamide gel electrophoresis (2D PAGE). A temperature-sensitive mutant strain, DH26, with a mean life span of about 15 days, under our conditions, was used to block...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(85)90118-6

    authors: Johnson TE,McCaffrey G

    更新日期:1985-05-31 00:00:00

  • An in vitro analysis of murine hemopoietic fibroblastoid progenitors and fibroblastoid cell function during aging.

    abstract::We determined the number of fibroblastoid progenitors (fibroblastoid colony-forming units, CFU-F) in femurs and spleens derived from (CBA X C57BL)F1 mice of different ages. The femoral CFU-F population size increased from 350 at 1 week of age and plateaued at approximately 1900 CFU-F at 8 weeks of age. The mean incide...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(83)90003-9

    authors: Brockbank KG,Ploemacher RE,van Peer CM

    更新日期:1983-05-01 00:00:00

  • Network remodeling of intramural coronary resistance arteries in the aged rat: a statistical analysis of geometry.

    abstract:AIMS:To identify the geometrical alterations in the age-remodeled rat coronary artery network and to develop a useful technique to analyze network properties in the rat heart. METHODS AND RESULTS:We analyzed the networks of the left anterior descendent coronary arteries on in situ perfused hearts of young (3 months) a...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2013.03.002

    authors: Wappler EA,Antal P,Várbíró S,Székács B,Simon A,Nagy Z,Monos E,Nádasy GL

    更新日期:2013-07-01 00:00:00

  • Hypersensitivity of hypoxia grown Mycobacterium smegmatis to DNA damaging agents: implications of the DNA repair deficiencies in attenuation of mycobacteria.

    abstract::Mycobacteria are an important group of pathogenic bacteria. We generated a series of DNA repair deficient strains of Mycobacterium smegmatis, a model organism, to understand the importance of various DNA repair proteins (UvrB, Ung, UdgB, MutY and Fpg) in survival of the pathogenic strains. Here, we compared tolerance ...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2013.08.006

    authors: Rex K,Kurthkoti K,Varshney U

    更新日期:2013-10-01 00:00:00

  • Effect of vitamin E and selenium supplement on the aging peripheral neurons of the male Sprague-Dawley rat.

    abstract::The effect of life-long diets containing different concentrations of selenium and vitamin E on the age pigment accumulation in the rat superior cervical ganglion, vagal ganglion and dorsal root ganglion, was studied using microspectrofluorometry. All types of ganglia showed unchanged amounts of age pigments at low or ...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(90)90162-9

    authors: Koistinaho J,Alho H,Hervonen A

    更新日期:1990-01-01 00:00:00

  • Selective decline in differentiating capacity of immunohemopoietic stem cells with aging.

    abstract::Bone marrow (BM) from young (3 months) and old (24 months) C57BL/6J mice were tested for the total number of colony forming units, which remain unchanged with age. The BM from both groups was used to reconstitute syngeneic, lethally irradiated mice that were 3 months' old. The reconstituted mice were followed for a pe...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(82)90114-2

    authors: Gozes Y,Umiel T,Trainin N

    更新日期:1982-03-01 00:00:00

  • Modelling the actions of chaperones and their role in ageing.

    abstract::Many molecular chaperones are also known as heat shock proteins because they are synthesised in increased amounts after brief exposure of cells to elevated temperatures. They have many cellular functions and are involved in the folding of nascent proteins, the re-folding of denatured proteins, the prevention of protei...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2004.09.031

    authors: Proctor CJ,Soti C,Boys RJ,Gillespie CS,Shanley DP,Wilkinson DJ,Kirkwood TB

    更新日期:2005-01-01 00:00:00

  • Multihormonal control of enzyme clusters in rat liver ontogenesis. II. Role of glucocorticosteroid and thyroid hormone and of glucagon and insulin.

    abstract::The role of glucocorticosteroid and thyroid hormone and of glucagon and insulin in the pre- and postnatal developmental formation of carbamoyl-phosphate synthase, ornithine transcarbamoylase, arginase, glutamate dehydrogenase, tyrosine aminotransferase, glucose-6-phosphatase, hexokinase and glucokinase activities in r...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(81)90010-5

    authors: Lamers WH,Mooren PG

    更新日期:1981-01-01 00:00:00

  • beta-Amyloid precursor protein (APP)-like immunoreactivity in the human sympathetic ganglia.

    abstract::The localization of the beta/A4 amyloid precursor protein (APP) was studied in the human lumbar paravertebral sympathetic ganglia of subjects of different ages, free of neurologic disease, using combined immunohistochemistry and image analysis techniques (optic microdensitometry). To ascertain which cells displayed AP...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(94)91588-1

    authors: Calzada B,Cabal A,Naves FJ,del Valle ME,Represa JJ,Vega JA

    更新日期:1994-10-20 00:00:00

  • Acute neutral endopeptidase inhibition is natriuretic in old rats.

    abstract::Neutral endopeptidase 24.11 (NEP) inhibitors prevent breakdown of atrial natriuretic peptide (ANP), and may be useful therapeutically, in sodium overload states as often occurs in the aged. However, age-dependent changes in ANP/NEP may limit the activity of these agents in the elderly. To investigate this we conducted...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/s0047-6374(01)00264-0

    authors: Greenfeld Z,Engels K,Samsell L,Baylis C

    更新日期:2001-09-01 00:00:00

  • Stromal hemopoietic microenvironment in aging.

    abstract::The bone marrow content, proliferative potential and proliferative activity of precursor cells for stromal fibroblast colony forming cells (CFC-F) were investigated in young and old CBA mice. The relationship between CFC-F and the number of bone marrow nucleated cells and granulocytic-macrophagal precursors (GM-CFC) w...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(90)90061-j

    authors: Sidorenko AV,Andrianova LF,Macsyuk TV,Butenko GM

    更新日期:1990-05-30 00:00:00

  • Effect of ageing on the response of the rat isolated testicular capsule to norepinephrine, acetylcholine and prostaglandins.

    abstract::The response of the rat isolated testicular capsule to norepinephrine (NE), acetylcholine (ACh) and prostaglandins (PG) was found to be age-dependent. The testicular capsular contractions attributable to smooth muscle cells located within the tunica albuginea may be involved in the transport of non-motile spermatozoa ...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(79)90015-0

    authors: Horowitz AM,Davis JR

    更新日期:1979-12-01 00:00:00

  • Superoxide anion radical production in different animal species.

    abstract::The general objective of this study was to examine the relationship between oxygen free radicals and the aging process. The rate of superoxide anion radical (O2.-) generation was measured in liver sub-mitochondrial particles from mouse, rat, rabbit, pig and cow, and in flight muscle sub-mitochondrial particles from th...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/0047-6374(89)90096-1

    authors: Sohal RS,Svensson I,Sohal BH,Brunk UT

    更新日期:1989-08-01 00:00:00

  • Carbonylated proteins in aging and exercise: immunoblot approaches.

    abstract::Protein carbonyls were studied in aging and exercise by immunoblot followed by one- or two-dimensional polyacrylamide gel electrophoresis using antibodies against 2,4-dinitrophenylhydrazones. Proteins of rat kidneys exhibited significant age-related increase in the amount of carbonyl while those of the brain and liver...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/s0047-6374(98)00133-x

    authors: Goto S,Nakamura A,Radak Z,Nakamoto H,Takahashi R,Yasuda K,Sakurai Y,Ishii N

    更新日期:1999-03-15 00:00:00

  • The effects of ageing and chronic dietary restriction on in vivo hepatic protein synthesis in the rat.

    abstract::Hepatic growth and protein synthesis in vivo was studied with age in ad libitum-fed and dietary restricted rats in which the mean and maximum lifespan was significantly extended. Livers from underfed rats showed significantly lower DNA, RNA and protein contents, and total protein synthesis. The fractional rate of synt...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(87)90008-x

    authors: Merry BJ,Holehan AM,Lewis SE,Goldspink DF

    更新日期:1987-07-01 00:00:00

  • Peroxidation of linoleic acid and its relation to aging and age dependent diseases.

    abstract::Cell proliferation, cell injury and aging are connected with changes in the cell membrane structure. Apparently these changes activate, in mammalian as well as in plant cells, lipases which liberate polyunsaturated fatty acids (PUFAs). PUFAs are the substrates for lipoxygenases which convert them to corresponding hydr...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/s0047-6374(01)00220-2

    authors: Spiteller G

    更新日期:2001-05-31 00:00:00

  • Growth factor responsiveness declines during adulthood for human skin-derived cells.

    abstract::Keratinocytes and fibroblasts were obtained from upper arm biopsies of young (22-27 years) and old (60-82 years) adult donors. Keratinocytes were grown in serum-free medium containing variable quantities of either epidermal growth factor (EGF) or a bovine hypothalamic extract known to contain keratinocyte growth facto...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(86)90009-6

    authors: Stanulis-Praeger BM,Gilchrest BA

    更新日期:1986-07-01 00:00:00

  • T-cell cytotoxicity and aging: differing causes of reduced response in individual mice.

    abstract::Specific T-cell cytotoxic responses to allogeneic and hapten-modified syngeneic cells decrease with age. In order to determine the causes of these reduced T-cell cytotoxic responses, spleen cells from individual young and senescent C57BL/6J female mice were mixed in various proportions in culture with either X-irradia...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(84)90135-0

    authors: Zharhary D,Segev Y,Gershon HE

    更新日期:1984-04-01 00:00:00

  • HSP70 induction may explain the long-lasting resistance to heat of Drosophila melanogaster having lived in hypergravity.

    abstract::In this study, we showed that in flies kept for 2 weeks at 1 (terrestrial gravity), 3 or 5 x g (hypergravity, HG) before transfer to 1 x g, resistance to heat remained higher in HG flies for several weeks after the transfer. The measurement of heat shock protein 70 (hsp70) indicated no induction of the protein in HG, ...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/s0047-6374(99)00024-x

    authors: Minois N,Guinaudy MJ,Payre F,Le Bourg E

    更新日期:1999-06-01 00:00:00

  • Cyclodextrin modulation of T lymphocyte signal transduction with aging.

    abstract::There is an alteration of the immune response in aging that leads to the increased incidence of infections, cancers and autoimmune disorders. The aim of the present study was to investigate whether there exists changes in signal transduction under the IL-2 receptor stimulation and the role of plasma membrane cholester...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/s0047-6374(01)00274-3

    authors: Fülöp T Jr,Douziech N,Goulet AC,Desgeorges S,Linteau A,Lacombe G,Dupuis G

    更新日期:2001-09-15 00:00:00

  • Superoxide dismutase, catalase and lipid peroxidation in liver of young mice of different ages.

    abstract::The lipid peroxidation and activities of main enzymes involved in the peroxide metabolism were measured at resting conditions and after completion of a 2-month treatment with H2O2. At the start of the experiments 1- and 3-month-old female BALB/c mice received either a high dose of H2O2 (0.5% H2O2 in drinking water; in...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(84)90030-7

    authors: Imre S,Tóth F,Fachet J

    更新日期:1984-12-01 00:00:00

  • Extended longevity mechanisms in short-lived progeroid mice: identification of a preservative stress response associated with successful aging.

    abstract::Semantic distinctions between "normal" aging, "pathological" aging (or age-related disease) and "premature" aging (otherwise known as segmental progeria) potentially confound important insights into the nature of each of the complex processes. Here we review a recent, unexpected discovery: the presence of longevity-as...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/j.mad.2006.11.011

    authors: van de Ven M,Andressoo JO,Holcomb VB,Hasty P,Suh Y,van Steeg H,Garinis GA,Hoeijmakers JH,Mitchell JR

    更新日期:2007-01-01 00:00:00

  • D-serine content and D-[3H]serine binding in the brain regions of the senescence-accelerated mouse.

    abstract::An established senescence-accelerated model mouse strain, SAMP8, shows the deterioration of learning and memory compared with a normal control strain, SAMR1. D-Serine binds to strychnine-insensitive glycine binding sites of the N-methyl-D-aspartate (NMDA) receptor complex, and enhances glutamate binding to the recepto...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/s0047-6374(98)00059-1

    authors: Nagata Y,Uehara T,Kitamura Y,Nomura Y,Horiike K

    更新日期:1998-08-14 00:00:00

  • Structure and function of type I and II macrophage scavenger receptors.

    abstract::Type I and II macrophage scavenger receptors are implicated in the pathologic deposition of cholesterol during the atherogenesis. There is a charged collagen structure of type I and II receptors identified as a ligand binding domain, which can recognize a wide range of negatively charged macromolecules including oxidi...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/s0047-6374(99)00079-2

    authors: Shirai H,Murakami T,Yamada Y,Doi T,Hamakubo T,Kodama T

    更新日期:1999-11-01 00:00:00

  • Effects of maturation and aging on calmodulin and calmodulin-regulated enzymes in various regions of mouse brain.

    abstract::Components of the calmodulin system (i.e., calmodulin levels and activities of the following calmodulin-dependent enzymes: Ca2+ + Mg2+-ATPase, adenylate and guanylate cyclases, cyclic AMP and cyclic GMP phosphodiesterases, and Ca2+-dependent protein kinase were studied in the following brain regions from immature (25-...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(86)90018-7

    authors: Hoskins B,Ho IK

    更新日期:1986-10-01 00:00:00

  • On the ontogeny of cardiac gene transcripts.

    abstract::As a prerequisite to investigating the specification and differentiation of cardiac tissue in vitro, the ontogeny of a number of putative cardiac-specific, and striated muscle-specific gene transcripts has been studied. The probes used include cDNAs of alpha-actins, myosin heavy chains, myosin light chains, alpha-trop...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(94)90019-1

    authors: Murrell WG,Masters CJ,Willis RJ,Crane DI

    更新日期:1994-12-16 00:00:00

  • Telomere length, oxidative stress, and antioxidant status in elderly men in Zutphen and Crete.

    abstract::The incidence of chronic diseases such as cardiovascular diseases is lower in Mediterranean Southern Europe than Northern Europe. This may be due to a lower level of oxidative stress and a higher antioxidant status in people living around the Mediterranean Sea. Oxidative stress may influence the rate of shortening of ...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2012.04.003

    authors: de Vos-Houben JM,Ottenheim NR,Kafatos A,Buijsse B,Hageman GJ,Kromhout D,Giltay EJ

    更新日期:2012-06-01 00:00:00

  • Mitochondrial production of reactive oxygen species and incidence of age-associated lymphoma in OF1 mice: effect of alternate-day fasting.

    abstract::There is currently of a great interest investigating the role of nutrition in the prevention of age-associated disorders. The present study aimed to evaluate, on a particular strain of mice, the efficacy of alternate-day fasting on the mitochondrial production of free radical species and on the incidence of a specific...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/j.mad.2005.06.007

    authors: Descamps O,Riondel J,Ducros V,Roussel AM

    更新日期:2005-11-01 00:00:00

  • Replicative aging as a source of cell heterogeneity in budding yeast.

    abstract::While deviations from the optimal phenotype are deleterious, increased variation can prevent population extinction under severe stresses. Cell division asymmetry is an important source of microbial phenotypic heterogeneity. A consecutive set of asymmetric divisions can cause the gradual accumulation of deleterious fac...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章,评审

    doi:10.1016/j.mad.2018.09.001

    authors: Knorre DA,Azbarova AV,Galkina KV,Feniouk BA,Severin FF

    更新日期:2018-12-01 00:00:00

  • A return to time, cells, systems, and aging: IV. Further thoughts on Gompertzian survival dynamics--the neonatal years.

    abstract::In this paper, I attempt to address the problem of how to model the survival curve in the early lifespan years; the neonatal years. I present a general model for a two group population in which the first group represents early stage failure and the second group represents the classical Gompertzian failure. After calcu...

    journal_title:Mechanisms of ageing and development

    pub_type: 杂志文章

    doi:10.1016/0047-6374(86)90026-6

    authors: Witten M

    更新日期:1986-01-01 00:00:00