Constructing and Characterizing Bacteriophage Libraries for Phage Therapy of Human Infections.

abstract：:Anaerobic digestion (AD) treatment of cattle manure and slurry makes it possible to produce biogas, a renewable and storable biofuel, as well as digestate, a residual organic matter that can be used to replace chemical fertilizers. On the other hand, the intense use of antibiotics (e.g., sulfamethoxazole) in animal hu...

journal_title：Frontiers in microbiology

authors： Mazzurco Miritana V,Massini G,Visca A,Grenni P,Patrolecco L,Spataro F,Rauseo J,Garbini GL,Signorini A,Rosa S,Barra Caracciolo A

更新日期：2020-09-16 00:00:00

abstract：:This study investigated the organohalide-respiring bacteria (OHRB) and the supporting microbial populations operating in a pilot scale plant employing poly-3-hydroxybutyrate (PHB), a biodegradable polymer produced by bacteria from waste streams, for the in situ bioremediation of groundwater contaminated by chlorinated...

journal_title：Frontiers in microbiology

authors： Matturro B,Pierro L,Frascadore E,Petrangeli Papini M,Rossetti S

更新日期：2018-07-24 00:00:00

abstract：:The cucurbit vegetables, including cucumbers, melons and pumpkins, have been cultivated for thousands of years without fungicides. However, their seed germination stage is prone to be infected by soil-borne fungal and oomycete pathogens. Endophytes are symbionts that reside inside plant tissues including seeds. Seed e...

journal_title：Frontiers in microbiology

authors： Khalaf EM,Raizada MN

更新日期：2018-02-05 00:00:00

abstract：:Coastal zones are transitional areas between land and sea where large amounts of organic and inorganic carbon compounds are recycled by microbes. Especially shallow zones near land have been shown to be the main source for oceanic methane (CH4) emissions. Water depth has been predicted as the best explanatory variable...

journal_title：Frontiers in microbiology

authors： Broman E,Sun X,Stranne C,Salgado MG,Bonaglia S,Geibel M,Jakobsson M,Norkko A,Humborg C,Nascimento FJA

更新日期：2020-07-07 00:00:00

abstract：:Healthy soil microbiomes are crucial for achieving high productivity in combination with crop quality, but our understanding of microbial diversity is still limited. In a large-scale study including 116 composite samples from vineyards, orchards and other crops from all over Styria (south-east Austria), agricultural m...

journal_title：Frontiers in microbiology

authors： Köberl M,Wagner P,Müller H,Matzer R,Unterfrauner H,Cernava T,Berg G

更新日期：2020-05-25 00:00:00

abstract：:The thermophilic archaeon Sulfolobus acidocaldarius can use different carbon sources for growth, including the pentoses D-xylose and L-arabinose. In this study, we identified the activator XylR (saci_2116) responsible for the transcriptional regulation of the pentose transporter and pentose metabolizing genes in S. ac...

journal_title：Frontiers in microbiology

authors： van der Kolk N,Wagner A,Wagner M,Waßmer B,Siebers B,Albers SV

更新日期：2020-05-26 00:00:00

abstract：:Cefoperazone/sulbactam has been shown to be efficacious for the treatment of infections caused by Acinetobacter baumannii; however, the mechanism underlying resistance to this synergistic combination is not well understood. In the present study, two A. baumannii isolates, AB1845 and AB2092, were isolated from a patien...

journal_title：Frontiers in microbiology

authors： Liu X,Zheng H,Zhang W,Shen Z,Zhao M,Chen Y,Sun L,Shi J,Zhang J

更新日期：2016-08-19 00:00:00

abstract：:[This corrects the article DOI: 10.3389/fmicb.2019.02612.]. ...

journal_title：Frontiers in microbiology

authors： Treven P,Mahnič A,Rupnik M,Golob M,Pirš T,Matijašić BB,Lorbeg PM

更新日期：2020-01-29 00:00:00

abstract：:Campylobacter is one of the most commonly reported foodborne human bacterial gastrointestinal pathogens. Campylobacter is the etiological agent of campylobacteriosis, which is generally a self-limited illness and therefore does not require treatment. However, when patients are immunocompromised or have other co-morbid...

journal_title：Frontiers in microbiology

authors： Yang Y,Feye KM,Shi Z,Pavlidis HO,Kogut M,J Ashworth A,Ricke SC

更新日期：2019-07-26 00:00:00

abstract：:Streptococcus pneumoniae colonizes the upper airways of children and the elderly. Colonization progresses to persistent carriage when S. pneumoniae forms biofilms, a feature required for the development of pneumococcal disease. Nasopharyngeal biofilms are structured with a matrix that includes extracellular DNA (eDNA)...

journal_title：Frontiers in microbiology

authors： Angulo-Zamudio UA,Vidal JE,Nazmi K,Bolscher JGM,Leon-Sicairos C,Antezana BS,Canizalez-Roman A,León-Sicairos N

更新日期：2019-10-18 00:00:00

abstract：:Acetogens can fix carbon (CO or CO2) into acetyl-CoA via the Wood-Ljungdahl pathway (WLP) that also makes them attractive cell factories for the production of fuels and chemicals from waste feedstocks. Although most biochemical details of the WLP are well understood and systems-level characterization of acetogen metab...

journal_title：Frontiers in microbiology

authors： de Souza Pinto Lemgruber R,Valgepea K,Gonzalez Garcia RA,de Bakker C,Palfreyman RW,Tappel R,Köpke M,Simpson SD,Nielsen LK,Marcellin E

更新日期：2019-11-15 00:00:00

abstract：:This study aimed to investigate effects of intravenous infusion with sodium butyrate (SB) on colonic microbiota, intestinal mucosal immune and intestinal development in normal growing pigs. Twelve crossbred barrows (Duroc × Landrace × Large White) fitted with a medical polyethylene cannula via internal jugular vein we...

journal_title：Frontiers in microbiology

authors： Chen X,Xu J,Su Y,Zhu W

更新日期：2018-07-20 00:00:00

abstract：:The human gut microbiome harbors a diverse array of metabolic pathways contributing to its development and homeostasis via a complex web of diet-dependent metabolic interactions within the microbial community and host. Genomics-based reconstruction and predictive modeling of these interactions would provide a framewor...

journal_title：Frontiers in microbiology

authors： Rodionov DA,Arzamasov AA,Khoroshkin MS,Iablokov SN,Leyn SA,Peterson SN,Novichkov PS,Osterman AL

更新日期：2019-06-12 00:00:00

abstract：:The multi-resistant Staphylococcus capitis clone NRCS-A has recently been described as a major pathogen causing nosocomial, late-onset sepsis (LOS) in preterm neonates worldwide. NRCS-A representatives exhibit an atypical antibiotic resistance profile. Here, the complete closed genome (chromosomal and plasmid sequence...

journal_title：Frontiers in microbiology

authors： Simões PM,Lemriss H,Dumont Y,Lemriss S,Rasigade JP,Assant-Trouillet S,Ibrahimi A,El Kabbaj S,Butin M,Laurent F

更新日期：2016-12-15 00:00:00

abstract：:Losses in crop yields due to disease need to be reduced in order to meet increasing global food demands associated with growth in the human population. There is a well-recognized need to develop new environmentally friendly control strategies to combat bacterial crop disease. Current control measures involving the use...

journal_title：Frontiers in microbiology

authors： Buttimer C,McAuliffe O,Ross RP,Hill C,O'Mahony J,Coffey A

更新日期：2017-01-20 00:00:00

abstract：:Developments in industrial applications inevitably accelerate the discharge of enormous substances into the environment, whereas multi-component mixtures commonly cause joint toxicity which is distinct from the simple sum of independent effect. Thus, ecotoxicological assessment, by luminescent bioassays has recently b...

journal_title：Frontiers in microbiology

authors： Wang D,Wang S,Bai L,Nasir MS,Li S,Yan W

更新日期：2020-07-31 00:00:00

abstract：:Our understanding of how antibodies are generated and function could help develop effective vaccines and antibody-based therapeutics against viruses such as HIV-1, SARS coronavirus (SARS CoV), and Hendra and Nipah viruses (henipaviruses). Although broadly neutralizing antibodies (bnAbs) against the HIV-1 were observed...

journal_title：Frontiers in microbiology

authors： Prabakaran P,Zhu Z,Chen W,Gong R,Feng Y,Streaker E,Dimitrov DS

更新日期：2012-08-02 00:00:00

abstract：:This research uses inteins, a type of mobile genetic element, to infer patterns of gene transfer within the Halobacteria. We surveyed 118 genomes representing 26 genera of Halobacteria for intein sequences. We then used the presence-absence profile, sequence similarity and phylogenies from the inteins recovered to exp...

journal_title：Frontiers in microbiology

authors： Soucy SM,Fullmer MS,Papke RT,Gogarten JP

更新日期：2014-06-26 00:00:00

abstract：:In this study we report the effects of fungal metabolites isolated from cultures of the fungus Trichoderma citrinoviride ITEM 4484 on the feeding preference of the aphid Rhopalosiphum padi, a major pest of cereal crops. Different phagodeterrent metabolites were purified by a combination of direct and reverse phase col...

journal_title：Frontiers in microbiology

authors： Ganassi S,Grazioso P,De Cristofaro A,Fiorentini F,Sabatini MA,Evidente A,Altomare C

更新日期：2016-03-10 00:00:00

abstract：:Thawing of permafrost soils is expected to stimulate microbial decomposition and respiration of sequestered carbon. This could, in turn, increase atmospheric concentrations of greenhouse gasses, such as carbon dioxide and methane, and create a positive feedback to climate warming. Recent metagenomic studies suggest th...

journal_title：Frontiers in microbiology

authors： Coolen MJ,Orsi WD

更新日期：2015-03-16 00:00:00

abstract：:Probiotic bacteria have been associated with various health benefits and included in overwhelming number of foods. Today, probiotic supplements are consumed with increasing regularity and record a rapidly growing economic value. With billions of heterogeneous populations of probiotics per serving, probiotic supplement...

journal_title：Frontiers in microbiology

authors： Wang Y,Jiang Y,Deng Y,Yi C,Wang Y,Ding M,Liu J,Jin X,Shen L,He Y,Wu X,Chen X,Sun C,Zheng M,Zhang R,Ye H,An H,Wong A

更新日期：2020-02-28 00:00:00

abstract：:The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a new coronavirus that was recently discovered in 2019. While the world is working hard to overcome and control the coronavirus disease 2019 (COVID-19) pandemic, it is also crucial to be prepared for the great impacts of this outbreak on the developme...

journal_title：Frontiers in microbiology

authors： Rezasoltani S,Yadegar A,Hatami B,Asadzadeh Aghdaei H,Zali MR

更新日期：2020-12-15 00:00:00

abstract：:Toxin/antitoxin (TA) systems are present in most prokaryote genomes. Toxins are almost exclusively proteins that reduce metabolism (but do not cause cell death), and antitoxins are either RNA or proteins that counteract the toxin or the RNA that encodes it. Although TA systems clearly stabilize mobile genetic elements...

journal_title：Frontiers in microbiology

authors： Song S,Wood TK

更新日期：2020-08-13 00:00:00

abstract：:In Appalachian ecosystems, forest disturbance has long-term effects on microbially driven biogeochemical processes such as nitrogen (N) cycling. However, little is known regarding long-term responses of forest soil microbial communities to disturbance in the region. We used 16S and ITS sequencing to characterize soil ...

journal_title：Frontiers in microbiology

authors： Osburn ED,McBride SG,Aylward FO,Badgley BD,Strahm BD,Knoepp JD,Barrett JE

更新日期：2019-12-11 00:00:00

abstract：:Yersinia pestis, responsible for causing fulminant plague, has evolved clonally from the enteric pathogen, Y. pseudotuberculosis, which in contrast, causes a relatively benign enteric illness. An ~97% nucleotide identity over 75% of their shared protein coding genes is maintained between these two pathogens, leaving m...

journal_title：Frontiers in microbiology

authors： Martínez-Chavarría LC,Vadyvaloo V

更新日期：2015-09-17 00:00:00

abstract：:RNA silencing, an evolutionarily conserved and sequence-specific gene-inactivation system, has a pivotal role in antiviral defense in most eukaryotic organisms. In plants, a class of exogenous small RNAs (sRNAs) originating from the infecting virus called virus-derived small interfering RNAs (vsiRNAs) are predominantl...

journal_title：Frontiers in microbiology

authors： Zhang C,Wu Z,Li Y,Wu J

更新日期：2015-11-09 00:00:00

abstract：:Clostridium difficile is a common cause of health-care acquired diarrhea, resulting in a spectrum of disease from mild diarrhea to life-threatening illness. Sixty Lactobacillus strains were screened for anti-C. difficile activity using a co-culture method. Based on their ability to inhibit C. difficile, L. gasseri APC...

journal_title：Frontiers in microbiology

authors： Quigley L,Coakley M,Alemayehu D,Rea MC,Casey PG,O'Sullivan Ó,Murphy E,Kiely B,Cotter PD,Hill C,Ross RP

更新日期：2019-02-20 00:00:00

abstract：:Enterotoxigenic Escherichia coli (ETEC) are opportunistic pathogens that colonize the small intestine, produce enterotoxins and induce diarrhea. Some aquaporins (AQPs), such as AQP3 and AQP8, have been reported to participate in diarrhea by decreasing cellular influx in the gastrointestinal (GI) tract. AQP4 is another...

journal_title：Frontiers in microbiology

authors： Zhang D,Yang L,Su W,Zhao Y,Ma X,Zhou H,Xu B,Zhang K,Ma H

更新日期：2018-01-09 00:00:00

abstract：:The microbial processes of denitrification and dissimilatory nitrate reduction to ammonium (DNRA) are two important nitrate reducing mechanisms in soil, which are responsible for the loss of nitrate ([Formula: see text]) and production of the potent greenhouse gas, nitrous oxide (N(2)O). A number of factors are known ...

journal_title：Frontiers in microbiology

authors： Giles M,Morley N,Baggs EM,Daniell TJ

更新日期：2012-12-18 00:00:00

abstract：:Whole-genome sequencing (WGS) of methicillin-resistant Staphylococcus aureus (MRSA) has been sparse in low- and middle-income countries, therefore, its population structure is unknown for many regions. We conducted a pilot surveillance of MRSA in the maternity ward of a teaching hospital in Armenia, to characterize th...

journal_title：Frontiers in microbiology

authors： Jamrozy D,Misra R,Xu Z,Ter-Stepanyan MM,Kocharyan KS,Cave R,Hambardzumyan AD,Mkrtchyan HV

更新日期：2019-07-10 00:00:00