Estimating functional connectivity using 2D tangential components in MEG sensor space.

Abstract:

BACKGROUND:Connectivity analysis in magnetoencephalography (MEG) sensor space is commonly used for the preliminary estimation of the functional relationship between cortical areas, but the results are difficult to interpret due to the field spread effect. To improve the interpretability of sensor-level connectivity analysis, we introduce and test a new connectivity measure based on imaginary coherence in this study. NEW METHOD:MEG signals from axial gradiometers are subjected to a wavelet transform at a frequency of interest, and are used to reconstruct 2D tangential magnetometer signals. The Euclidean norm of imaginary coherence values obtained from four available pairs between 2D tangential components at two locations is then used to estimate functional connectivity between sensor locations. The use of this new connectivity measure can be extended to 2D planar gradiometer signals or 3D source signals, where the functional relationship between multi-dimensional signals at different locations needs to be quantified as scalar variables. RESULTS:The proposed method was applied to measured and simulated auditory evoked MEG data. The Euclidean norm of imaginary coherence reliably eliminated the field spread effect and showed increased inter-hemispheric coherence between sensors above the left and the right auditory cortex. The significance of the results was tested by introducing variability in spontaneous brain activities in multi-trial evoked data simulations. COMPARISON WITH EXISTING METHOD:The distribution of imaginary coherence among axial gradiometer signals shows peaks not at the sensors directly above the neuronal current sources, but at sensors with field extreme.

journal_name

J Neurosci Methods

authors

Kim MY,Kwon H,Lim S,Lee YH,Kim JW,Kim K

doi

10.1016/j.jneumeth.2015.09.012

subject

Has Abstract

pub_date

2016-01-15 00:00:00

pages

64-75

eissn

0165-0270

issn

1872-678X

pii

S0165-0270(15)00345-3

journal_volume

257

pub_type

杂志文章
  • A two-channel action-potential generator for testing neurophysiologic data acquisition/analysis systems.

    abstract::A 2-channel action-potential generator system was designed for use in testing neurophysiologic data acquisition/analysis systems. The system consists of a personal computer controlling an external hardware unit. This system is capable of generating 2 channels of simulated action potential (AP) waveshapes. The AP wavef...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(94)00002-x

    authors: Lisiecki RS,Voigt HF

    更新日期:1995-08-01 00:00:00

  • An improved HRP method for tracing axons in whole-mount preparations during early stages of regeneration in peripheral nerves of adult animals.

    abstract::An improved method using HRP for visualizing axons in whole-mount preparations is described. Application of this method to preparations of regenerating frog peripheral nerves maintained in organ culture was used to show that regeneration following nerve crush begins after about 3 days. ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(92)90110-y

    authors: Tonge D,Edbladh M,Edström A,Kanje M

    更新日期:1992-08-01 00:00:00

  • Specificity and efficacy of noradrenaline, serotonin depletion in discrete brain areas of Swiss mice by neurotoxins.

    abstract::The aim of this work is to define neurotoxins doses to have efficient and specific depletion of noradrenaline (NA), serotonin (5-HT) neurotransmission in cortex, striatum, hippocampus and hypothalamus of Swiss mice after intraperitoneal administration of, respectively, N-(2-chloroethyl)-N-ethyl-2-bromobenzylamine hydr...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2005.06.008

    authors: Dailly E,Chenu F,Petit-Demoulière B,Bourin M

    更新日期:2006-01-15 00:00:00

  • Drawing inferences from Fano factor calculations.

    abstract::An important characterization of neural spiking is the ratio of the variance to the mean of the spike counts in a set of intervals--the Fano factor. For a Poisson process, the theoretical Fano factor is exactly one. For simulated or experimental neural data, the sample Fano factor is never exactly one, but often appea...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2010.04.012

    authors: Eden UT,Kramer MA

    更新日期:2010-06-30 00:00:00

  • Monosodium urate test: a new analgesic test by crystal-induced monoarthritis in rats.

    abstract::The analgesic effects of various agents were evaluated in knee joint monoarthritic rats where arthritis was induced by monosodium urate (MSU) crystals injected into the knee joint cavities. The weight supported by each hind limb was measured quantitatively using pressure transducers, which revealed dose-dependent reco...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(90)90026-c

    authors: Otsuki T,Agatsuma Y,Jokura H,Sakurada S,Kisara K,Yoshimoto T

    更新日期:1990-08-01 00:00:00

  • Patch-clamp studies in the CNS illustrate a simple new method for obtaining viable neurons in rat brain slices: glycerol replacement of NaCl protects CNS neurons.

    abstract::Viable neurons in brain slices are crucial for electrophysiological studies. The present study describes a new method for obtaining viable cells in several regions of the central nervous system including the ventral tegmental area, the hypothalamus, the periaqueductal grey matter and the spinal cord. The essence of th...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2006.06.006

    authors: Ye JH,Zhang J,Xiao C,Kong JQ

    更新日期:2006-12-15 00:00:00

  • Modeling of evoked field potentials in hippocampal CA1 area describes their dependence on NMDA and GABA receptors.

    abstract::A computer model of the hippocampal CA1 area, which receives synaptic inputs from CA3 neurons via the Schaffer collaterals, was constructed. Pyramidal cells (PC) and two types of interneurons were represented by compartmental models, and mechanisms of feed-forward inhibition (FFI) and recurrent inhibition were incorpo...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(00)00334-4

    authors: Sargsyan AR,Papatheodoropoulos C,Kostopoulos GK

    更新日期:2001-01-15 00:00:00

  • Lateral rectus whole muscle and motor unit contractile measures with the extraocular muscles intact.

    abstract::Both extracellular and intracellular stimulation of single motoneurons were shown to be similarly effective and consistent in eliciting contractile responses in single lateral rectus muscle motor units. The whole muscle was activated by stimulating the sixth nerve in the brain stem. Both whole muscle and motor unit co...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(97)00141-6

    authors: Goldberg SJ,Shall MS

    更新日期:1997-12-30 00:00:00

  • Rabies virus-mediated connectivity tracing from single neurons.

    abstract::An understanding of how the brain processes information requires knowledge of its underlying wiring diagrams, as well as insights into the relationship between circuit architecture and physiological function. Notably, rabies virus based single-cell genetic manipulations that can facilitate an experimental link between...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章,评审

    doi:10.1016/j.jneumeth.2019.108365

    authors: Schwarz MK,Remy S

    更新日期:2019-09-01 00:00:00

  • Fast scanning and efficient photodetection in a simple two-photon microscope.

    abstract::Two-photon laser scan microscopy carries many advantages for work on brain slices and bulk tissue. However, it has very low signal levels compared to conventional fluorescence microscopy. This is disadvantageous in fast imaging applications when photon shot noise is limiting. Working on brain slices with excitation po...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(99)00103-x

    authors: Tan YP,Llano I,Hopt A,Würriehausen F,Neher E

    更新日期:1999-10-15 00:00:00

  • A reliable strategy for single-cell RNA sequencing analysis using cryoconserved primary cortical cells.

    abstract:BACKGROUND:The application of single-cell RNA sequencing (scRNASeq) represents a unique approach to identify hundreds to millions of cells in mammalian cortical multilayers at different stages of embryogenesis. ScRNASeq technology applied to neurological studies requires the use of fresh starting materials because stan...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2020.108960

    authors: Verrillo L,Mangano E,Drongitis D,Merelli I,Pischedda F,Piccoli G,Consolandi C,Bordoni R,Miano MG

    更新日期:2021-01-01 00:00:00

  • Increased throughput assays of locomotor dysfunction in Drosophila larvae.

    abstract::Larval locomotion is a sensitive readout of a range of nervous system deficits in Drosophila, and has been utilised to quantify modulation of the disease phenotype in models of human disease. Single larvae are typically analysed in series using manual quantification of parameters such as contraction rate, or grouped t...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2011.08.037

    authors: Sinadinos C,Cowan CM,Wyttenbach A,Mudher A

    更新日期:2012-01-30 00:00:00

  • Electrokinetic infusions into hydrogels and brain tissue: Control of direction and magnitude of solute delivery.

    abstract:BACKGROUND:Delivering solutes to a particular region of the brain is currently achieved by iontophoresis for very small volumes and by diffusion from a microdialysis probe for larger volumes. There is a need to deliver solutes to particular areas with more control than is possible with existing methods. NEW METHOD:Ele...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2018.10.005

    authors: Faraji AH,Jaquins-Gerstl AS,Valenta AC,Weber SG

    更新日期:2019-01-01 00:00:00

  • A picoliter 'fountain-pen' using co-axial dual pipettes.

    abstract::A double pipette system for local, controlled drug infusion is presented. Two concentric pipettes can be manipulated separately and pressurized independently by a designated double holder. The inner pipette is loaded with the desirable solution (drug), and functions as a source, while the outer one is a sink. This giv...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(03)00099-2

    authors: Feinerman O,Moses E

    更新日期:2003-07-15 00:00:00

  • Detecting brain structural changes as biomarker from magnetic resonance images using a local feature based SVM approach.

    abstract::Detecting brain structural changes from magnetic resonance (MR) images can facilitate early diagnosis and treatment of neurological and psychiatric diseases. Many existing methods require an accurate deformation registration, which is difficult to achieve and therefore prevents them from obtaining high accuracy. We de...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2013.09.001

    authors: Chen Y,Storrs J,Tan L,Mazlack LJ,Lee JH,Lu LJ

    更新日期:2014-01-15 00:00:00

  • Preprocessing effects of 22 linear univariate features on the performance of seizure prediction methods.

    abstract::Combining multiple linear univariate features in one feature space and classifying the feature space using machine learning methods could predict epileptic seizures in patients suffering from refractory epilepsy. For each patient, a set of twenty-two linear univariate features were extracted from 6 electroencephalogra...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2013.03.019

    authors: Rasekhi J,Mollaei MR,Bandarabadi M,Teixeira CA,Dourado A

    更新日期:2013-07-15 00:00:00

  • Viscoelastic characterization of injured brain tissue after controlled cortical impact (CCI) using a mouse model.

    abstract:BACKGROUND:Mechanical properties of the brain tissue are crucial to understand the mechanisms of traumatic brain injury (TBI). Injured brain tissue could induce changes of mechanical properties and anatomical structures. However, limited data is available for the injured tissue. NEW METHOD:We developed a custom-built ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2019.108463

    authors: Qiu S,Jiang W,Alam MS,Chen S,Lai C,Wang T,Li X,Liu J,Gao M,Tang Y,Li X,Zeng J,Feng Y

    更新日期:2020-01-15 00:00:00

  • Three dimensional rendering of auditory neuronal responses: A novel illustration of receptive field across frequency, intensity & time domains.

    abstract:BACKGROUND:Neural coding of sound information is often studied through frequency tuning curve (FTC), spectro-temporal receptive field (STRF), post-stimulus time histogram (PSTH), and other methods such as rate functions. These methods, despite providing a robust characterization of auditory responses in their specific ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2020.108682

    authors: Qureshi F,Yan J

    更新日期:2020-05-15 00:00:00

  • An optimized method to process mouse CNS to simultaneously analyze neural cells and leukocytes by flow cytometry.

    abstract:BACKGROUND:Flow cytometry is an efficient and powerful technique to characterize and quantify numerous cells. However, the strengths of this technique have not been widely harnessed in neurosciences due to the critical step of CNS tissue preparation into a single cell suspension. Previous reports assessed either neural...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2015.03.021

    authors: Legroux L,Pittet CL,Beauseigle D,Deblois G,Prat A,Arbour N

    更新日期:2015-05-30 00:00:00

  • Vibrating glass stylets: tools for precise microsurgery on cuticular structures.

    abstract::Precisely localized lesions in cuticular structures of insects can be produced by fine glass rods, vibrating transversally at frequencies above 100 kHz. The oscillating edge of the glass rod scrapes off the chitinous material at minimal elastic deformation during treatment. The achieved roughness height is in the 0.1 ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(89)90111-8

    authors: Gödde J

    更新日期:1989-07-01 00:00:00

  • A modified and highly sensitive Golgi-Cox method to enable complete and stable impregnation of embryonic neurons.

    abstract::The FD Rapid GolgiStain Kit (FD NeuroTechnologies, Inc., Ellicott City, MD) was developed using an improved Golgi-Cox impregnation method to provide stable, sensitive, and convenient staining of mature neurons. However, embryonic neurons cannot be clearly visualized using this method. We have further improved the Golg...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2012.06.007

    authors: Koyama Y,Tohyama M

    更新日期:2012-07-30 00:00:00

  • Dextran backfill tracers combined with Lucifer yellow injections for neuroanatomic studies of the leech head ganglion.

    abstract::Several neuronal tracing substances were applied to the cut ends of leech cephalic nerves and the resulting backfills into the subesophageal ganglion (sbEG) were mapped. A 12 h incubation in 3 kDa dextrans conjugated either to a fluorochrome or to biotin (subsequently tagged with peroxidase) was satisfactory. In separ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:

    authors: Daberkow DP,Vaughan DK

    更新日期:1996-08-01 00:00:00

  • Micropatterned surface electrode for massive selective stimulation of intraepidermal nociceptive fibres.

    abstract:BACKGROUND:No satisfactory neurophysiological test for nociceptive afferents is available to date. Laser stimuli present risks of skin damage, whilst electrical stimulation through specially designed electrodes is not selective enough. NEW METHOD:We present a new electrode designed according to critical issues identif...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2017.08.032

    authors: Leandri M,Marinelli L,Siri A,Pellegrino L

    更新日期:2018-01-01 00:00:00

  • Use of a capillary alginate gel (Capgel™) to study the three-dimensional development of sensory nerves reveals the formation of a rudimentary perineurium.

    abstract:BACKGROUND:Peripheral neuropathies affect approximately 20 million people in the United States and often stem from other chronic conditions, such as diabetes. In vitro methodologies to facilitate the understanding and treatment of these disorders often lack the cellular and functional complexity required to accurately ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2018.05.003

    authors: Anderson WA,Willenberg AR,Bosak AJ,Willenberg BJ,Lambert S

    更新日期:2018-07-15 00:00:00

  • An integrated system for synchronous detection of neuron spikes and dopamine activities in the striatum of Parkinson monkey brain.

    abstract:BACKGROUND:Synchronous detecting neuron spikes and dopamine (DA) activities in the non-human primate brain play an important role in understanding of Parkinson's disease (PD). At present, most experiments are carried out by combing of electrodes and commercial instruments, which are inconvenient, time-consuming and ine...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2018.04.015

    authors: Xu S,Zhang Y,Zhang S,Xiao G,Wang M,Song Y,Gao F,Li Z,Zhuang P,Chan P,Tao G,Yue F,Cai X

    更新日期:2018-07-01 00:00:00

  • Tools for physiology labs: an inexpensive high-performance amplifier and electrode for extracellular recording.

    abstract::The cost of electronic equipment can be a critical barrier to including neurophysiology exercises in biology teaching programs. We describe the construction of a simple and inexpensive AC preamplifier with performance comparable to that of commercial products. The amplifier consists of two integrated circuits in five ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(01)00328-4

    authors: Land BR,Wyttenbach RA,Johnson BR

    更新日期:2001-03-30 00:00:00

  • ADHD-like hyperactivity, with no attention deficit, in adult rats after repeated hypoxia during the equivalent of extreme prematurity.

    abstract::The most common behavioural disorder seen in children and adolescents born extremely prematurely is attention deficit hyperactivity disorder (ADHD). The hyperactive/impulsive sub-type of ADHD or the inattentive sub-type or the hyperactive/impulsive/inattentive sub-type can be evident. These sub-types of ADHD can persi...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2007.01.010

    authors: Oorschot DE,Voss L,Covey MV,Bilkey DK,Saunders SE

    更新日期:2007-11-30 00:00:00

  • Dependence of the paired motor unit analysis on motor unit discharge characteristics in the human tibialis anterior muscle.

    abstract::The paired motor unit analysis provides in vivo estimates of the magnitude of persistent inward currents (PIC) in human motoneurons by quantifying changes in the firing rate (ΔF) of an earlier recruited (reference) motor unit at the time of recruitment and derecruitment of a later recruited (test) motor unit. This stu...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2011.03.018

    authors: Stephenson JL,Maluf KS

    更新日期:2011-05-15 00:00:00

  • Application of scanning electron microscopy in an analysis of the retina of lower vertebrates.

    abstract::The scanning electron microscope (SEM) is a useful tool in the study of the retina of lower vertebrates. SEM analysis (preparation over the critical point) offers a useful addition to the existing histological preparations. It is suitable for a comparative analysis, in which the arrangement of different cellular eleme...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(84)90049-9

    authors: Breidbach O

    更新日期:1984-11-01 00:00:00

  • An immunocytochemical method for marking microelectrode tracks following single-unit recordings in long surviving, awake monkeys.

    abstract::We describe an immunocytochemical method for marking microelectrode tracks made during single-unit recordings in long surviving, awake monkeys. This procedure detects the increase in glial fibrillary acidic protein in the glial cells along a microelectrode track using commercially available antibodies. We have success...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(92)90085-r

    authors: Benevento LA,McCleary LB

    更新日期:1992-03-01 00:00:00