An Edge-Based Model of SEIR Epidemics on Static Random Networks.

Abstract:

:Studies have been done using networks to represent the spread of infectious diseases in populations. For diseases with exposed individuals corresponding to a latent period, an SEIR model is formulated using an edge-based approach described by a probability generating function. The basic reproduction number is computed using the next generation matrix method and the final size of the epidemic is derived analytically. The SEIR model in this study is used to investigate the stochasticity of the SEIR dynamics. The stochastic simulations are performed applying continuous-time Gillespie's algorithm given Poisson and power law with exponential cut-off degree distributions. The resulting predictions of the SEIR model given the initial conditions match well with the stochastic simulations, validating the accuracy of the SEIR model. We varied the contribution of the disease parameters and the average degree of the network in order to investigate their effects on the spread of disease. We verified that the infection and the recovery rates show significant effects on the dynamics of the disease transmission. While the exposed rate delays the spread of the disease, increasing it towards infinity would lead to almost the same dynamics as that of an SIR case. A network with high average degree results to an early and higher peak of the epidemic compared to a network with low average degree. The results in this paper can be used as an alternative way of explaining the spread of disease and it provides implications on the control strategies applied to mitigate the disease transmission.

journal_name

Bull Math Biol

authors

Alota CP,Pilar-Arceo CPC,de Los Reyes V AA

doi

10.1007/s11538-020-00769-0

subject

Has Abstract

pub_date

2020-07-16 00:00:00

pages

96

issue

7

eissn

0092-8240

issn

1522-9602

pii

10.1007/s11538-020-00769-0

journal_volume

82

pub_type

杂志文章
  • Multiple limit cycles in a Gause type predator-prey model with Holling type III functional response and Allee effect on prey.

    abstract::This work aims to examine the global behavior of a Gause type predator-prey model considering two aspects: (i) the functional response is Holling type III and, (ii) the prey growth is affected by the Allee effect. We prove the origin of the system is an attractor equilibrium point for all parameter values. It has also...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-010-9577-5

    authors: González-Olivares E,Rojas-Palma A

    更新日期:2011-06-01 00:00:00

  • Discussion: the Kermack-McKendrick epidemic threshold theorem.

    abstract::The paper reviews the work of Kermack and McKendrick on the development of simple mathematical models of the transmission dynamics of viral and bacterial infectious agents within population of hosts. The focus of attention is centred on the notion of a threshold density of susceptible hosts to trigger an epidemic and ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章,评审

    doi:10.1016/s0092-8240(05)80039-4

    authors: Anderson RM

    更新日期:1991-01-01 00:00:00

  • The mystery of two straight lines in bacterial genome statistics.

    abstract::In special coordinates (codon position-specific nucleotide frequencies), bacterial genomes form two straight lines in 9-dimensional space: one line for eubacterial genomes, another for archaeal genomes. All the 348 distinct bacterial genomes available in Genbank in April 2007, belong to these lines with high accuracy....

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-007-9229-6

    authors: Gorban AN,Zinovyev AY

    更新日期:2007-10-01 00:00:00

  • Optimal tuberculosis prevention and control strategy from a mathematical model based on real data.

    abstract::A mathematical control model for the transmission dynamics of tuberculosis (TB) in South Korea is developed on the basis of the reported active-TB and relapse-TB incidence data. In this work, optimal control theory is used to propose optimal TB prevention and control strategy and rearrange the government TB budget for...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-014-9962-6

    authors: Choi S,Jung E

    更新日期:2014-07-01 00:00:00

  • Effects of Intrinsic and Extrinsic Host Mortality on Disease Spread.

    abstract::The virulent effects of a pathogen on host fecundity and mortality (both intrinsic and extrinsic mortality due to predation) often increase with the age of infection. Age of infection often is also correlated with parasite fitness, in terms of the number of both infective propagules produced and the between-host trans...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-016-0141-9

    authors: Rapti Z,Cáceres CE

    更新日期:2016-02-01 00:00:00

  • The role of space in the exploitation of resources.

    abstract::In order to understand the role of space in ecological communities where each species produces a certain type of resource and has varying abilities to exploit the resources produced by its own species and by the other species, we carry out a comparative study of an interacting particle system and its mean-field approx...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-011-9649-1

    authors: Kang Y,Lanchier N

    更新日期:2012-01-01 00:00:00

  • An algebraic approach to signaling cascades with N layers.

    abstract::Posttranslational modification of proteins is key in transmission of signals in cells. Many signaling pathways contain several layers of modification cycles that mediate and change the signal through the pathway. Here, we study a simple signaling cascade consisting of n layers of modification cycles such that the modi...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-011-9658-0

    authors: Feliu E,Knudsen M,Andersen LN,Wiuf C

    更新日期:2012-01-01 00:00:00

  • Invasibility of nectarless flowers in plant-pollinator systems.

    abstract::This paper considers plant-pollinator systems in which plants are divided into two categories: The plants that secret a substantial volume of nectar in their flowers are called secretors, while those without secreting nectar are called nonsecretors (cheaters). The interaction between pollinators and secretors is mutua...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-013-9846-1

    authors: Wang Y,Wu H

    更新日期:2013-07-01 00:00:00

  • Conflicting objectives in chemotherapy with drug resistance.

    abstract::A system of differential equations for the control of tumor cells growth in a cycle nonspecific chemotherapy is presented. Spontaneously acquired drug resistance is accounted for, as well as the evolution in time of normal cells. In addition, optimization of conflicting objectives forms the aim of the chemotherapeutic...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/BF02458426

    authors: Costa MI,Boldrini JL

    更新日期:1997-07-01 00:00:00

  • Wavelet-based analysis of human blood-flow dynamics.

    abstract::To analyze signals measured from human blood flow in the time-frequency domain, we used the wavelet transform which gives good time resolution for high-frequency components and good frequency resolution for low-frequency components. Five characteristic frequency peaks, corresponding to five almost periodic rhythmic ac...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1006/bulm.1998.0047

    authors: Bracic M,Stefanovska A

    更新日期:1998-09-01 00:00:00

  • Pattern Formation in the Longevity-Related Expression of Heat Shock Protein-16.2 in Caenorhabditis elegans.

    abstract::Aging in Caenorhabditis elegans is controlled, in part, by the insulin-like signaling and heat shock response pathways. Following thermal stress, expression levels of small heat shock protein-16.2 show a spatial patterning across the 20 intestinal cells that reside along the length of the worm. Here, we present a hypo...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-018-0482-7

    authors: Wentz JM,Mendenhall AR,Bortz DM

    更新日期:2018-10-01 00:00:00

  • A stochastic version of the Eigen model.

    abstract::We exhibit a stochastic discrete time model that produces the Eigen model (Naturwissenschaften 58:465-523, 1971) in the deterministic and continuous time limits. The model is based on the competition among individuals differing in terms of fecundity but with the same viability. We explicitly write down the Markov matr...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-010-9525-4

    authors: Musso F

    更新日期:2011-01-01 00:00:00

  • Global stability for a class of virus models with cytotoxic T lymphocyte immune response and antigenic variation.

    abstract::We study the global stability of a class of models for in-vivo virus dynamics that take into account the Cytotoxic T Lymphocyte immune response and display antigenic variation. This class includes a number of models that have been extensively used to model HIV dynamics. We show that models in this class are globally a...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-010-9543-2

    authors: Souza MO,Zubelli JP

    更新日期:2011-03-01 00:00:00

  • The Evolutionary Dynamics of Stochastic Epidemic Model with Nonlinear Incidence Rate.

    abstract::A stochastic SIRS epidemic model with nonlinear incidence rate and varying population size is formulated to investigate the effect of stochastic environmental variability on inter-pandemic transmission dynamics of influenza A. Sufficient conditions for extinction and persistence of the disease are established. In the ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-015-0101-9

    authors: Li D,Cui J,Liu M,Liu S

    更新日期:2015-09-01 00:00:00

  • A Mixed-Culture Biofilm Model with Cross-Diffusion.

    abstract::We propose a deterministic continuum model for mixed-culture biofilms. A crucial aspect is that movement of one species is affected by the presence of the other. This leads to a degenerate cross-diffusion system that generalizes an earlier single-species biofilm model. Two derivations of this new model are given. One,...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-015-0117-1

    authors: Rahman KA,Sudarsan R,Eberl HJ

    更新日期:2015-11-01 00:00:00

  • Impact of Harvesting on a Bioeconomic Predator-Prey Fishery Model Subject to Environmental Toxicant.

    abstract::The present paper studies a predator-prey fishery model which incorporates the independent harvesting strategies and nonlinear impact of an anthropogenic toxicant. Both fish populations are harvested with different harvesting efforts, and the cases for the presence and non-presence of harvesting effort are discussed. ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-019-00627-8

    authors: Ang TK,Safuan HM,Sidhu HS,Jovanoski Z,Towers IN

    更新日期:2019-07-01 00:00:00

  • Analyzing the fitch method for reconstructing ancestral states on ultrametric phylogenetic trees.

    abstract::The accuracy of the Fitch method for reconstructing ancestral states on ultrametric phylogenetic trees is studied. Two recurrence relations for computing the accuracy are given here. Using these relations, we analyze the convergence of the accuracy of the Fitch method for reconstructing the root state on a complete bi...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-010-9505-8

    authors: Zhang L,Shen J,Yang J,Li G

    更新日期:2010-10-01 00:00:00

  • Representation of Multiple Cellular Phenotypes Within Tissue-Level Simulations of Cardiac Electrophysiology.

    abstract::Distinct electrophysiological phenotypes are exhibited by biological cells that have differentiated into particular cell types. The usual approach when simulating the cardiac electrophysiology of tissue that includes different cell types is to model the different cell types as occupying spatially distinct yet coupled ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-018-0516-1

    authors: Bowler LA,Gavaghan DJ,Mirams GR,Whiteley JP

    更新日期:2019-01-01 00:00:00

  • Intermittent Preventive Treatment (IPT): Its Role in Averting Disease-Induced Mortality in Children and in Promoting the Spread of Antimalarial Drug Resistance.

    abstract::We develop an age-structured ODE model to investigate the role of intermittent preventive treatment (IPT) in averting malaria-induced mortality in children, and its related cost in promoting the spread of antimalarial drug resistance. IPT, a malaria control strategy in which a full curative dose of an antimalarial med...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-018-0524-1

    authors: Manore CA,Teboh-Ewungkem MI,Prosper O,Peace A,Gurski K,Feng Z

    更新日期:2019-01-01 00:00:00

  • Computational experiments support a competitive function in the CA3 region of the hippocampus.

    abstract::The comprehension of activities and functions of complex brain structures requires, among other things, information on simultaneous activities in several regions. Results reported in the literature using multi(micro/macro)electrode recordings or imaging techniques provide incomplete information due either to the small...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1006/bulm.1997.0032

    authors: Ventriglia F

    更新日期:1998-03-01 00:00:00

  • Oscillations and waves of cyclic AMP in Dictyostelium: a prototype for spatio-temporal organization and pulsatile intercellular communication.

    abstract::The amoebae Dictyostelium discoideum aggregate after starvation in a wavelike manner in response to periodic pulses of cyclic AMP (cAMP) secreted by cells which behave as aggregation centers. In addition to autonomous oscillations, the cAMP signaling system that controls aggregation is also capable of excitable behavi...

    journal_title:Bulletin of mathematical biology

    pub_type: 历史文章,杂志文章

    doi:10.1007/s11538-006-9090-z

    authors: Goldbeter A

    更新日期:2006-07-01 00:00:00

  • Are Tumor Cell Lineages Solely Shaped by Mechanical Forces?

    abstract::This paper investigates cell proliferation dynamics in small tumor cell aggregates using an individual-based model (IBM). The simulation model is designed to study the morphology of the cell population and of the cell lineages as well as the impact of the orientation of the division plane on this morphology. Our IBM m...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-017-0333-y

    authors: Leroy-Lerêtre M,Dimarco G,Cazales M,Boizeau ML,Ducommun B,Lobjois V,Degond P

    更新日期:2017-10-01 00:00:00

  • Deterministic versus stochastic cell polarisation through wave-pinning.

    abstract::Cell polarization is an important part of the response of eukaryotic cells to stimuli, and forms a primary step in cell motility, differentiation, and many cellular functions. Among the important biochemical players implicated in the onset of intracellular asymmetries that constitute the early phases of polarization a...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-012-9766-5

    authors: Walther GR,Marée AF,Edelstein-Keshet L,Grieneisen VA

    更新日期:2012-11-01 00:00:00

  • Computational fluid dynamics of fish gill rakers during crossflow filtration.

    abstract::We study crossflow filtration mechanisms in suspension-feeding fishes using computational fluid dynamics to model fluid flow and food particle movement in the vicinity of the gill rakers. During industrial and biological crossflow filtration, particles are retained when they remain suspended in the mainstream flow tra...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-011-9709-6

    authors: Cheer A,Cheung S,Hung TC,Piedrahita RH,Sanderson SL

    更新日期:2012-04-01 00:00:00

  • Tubuloglomerular feedback signal transduction in a short loop of henle.

    abstract::In previous studies, we used a mathematical model of the thick ascending limb (TAL) to investigate nonlinearities in the tubuloglomerular feedback (TGF) loop. That model does not represent other segments of the nephron, the water, and NaCl transport along which may impact fluid flow rate and NaCl transport along the T...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-009-9436-4

    authors: Layton AT,Edwards A

    更新日期:2010-01-01 00:00:00

  • Speed of pattern appearance in reaction-diffusion models: implications in the pattern formation of limb bud mesenchyme cells.

    abstract::It has been postulated that fibroblast growth factor (FGF) treatment of cultured limb bud mesenchyme cells reinforces the lateral inhibitory effect, but the cells also show accelerated pattern appearance. In the present study, we analyze how a small change in a specific parameter affects the speed of pattern appearanc...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1016/j.bulm.2003.09.009

    authors: Miura T,Maini PK

    更新日期:2004-07-01 00:00:00

  • Disease Extinction Versus Persistence in Discrete-Time Epidemic Models.

    abstract::We focus on discrete-time infectious disease models in populations that are governed by constant, geometric, Beverton-Holt or Ricker demographic equations, and give a method for computing the basic reproduction number, [Formula: see text]. When [Formula: see text] and the demographic population dynamics are asymptotic...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-018-0426-2

    authors: van den Driessche P,Yakubu AA

    更新日期:2019-11-01 00:00:00

  • Continuous probabilistic analysis to evolutionary game dynamics in finite populations.

    abstract::Evolutionary game dynamics of two strategies in finite population is studied by continuous probabilistic approach. Besides frequency dependent selection, mutation was also included in this study. The equilibrium probability density functions of abundance, expected time to extinction or fixation were derived and their ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-009-9397-7

    authors: Gao M

    更新日期:2009-07-01 00:00:00

  • Mutation and Selection in Bacteria: Modelling and Calibration.

    abstract::Temporal evolution of a clonal bacterial population is modelled taking into account reversible mutation and selection mechanisms. For the mutation model, an efficient algorithm is proposed to verify whether experimental data can be explained by this model. The selection-mutation model has unobservable fitness paramete...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-018-0529-9

    authors: Bayliss CD,Fallaize C,Howitt R,Tretyakov MV

    更新日期:2019-03-01 00:00:00

  • Strategic treatment interruptions during imatinib treatment of chronic myelogenous leukemia.

    abstract::Although imatinib is an effective treatment for chronic myelogenous leukemia (CML), and nearly all patients treated with imatinib attain some form of remission, imatinib does not completely eliminate leukemia. Moreover, if the imatinib treatment is stopped, most patients eventually relapse (Cortes et al. in Clin. Canc...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-010-9553-0

    authors: Paquin D,Kim PS,Lee PP,Levy D

    更新日期:2011-05-01 00:00:00