Mathematical Modeling Approaches for Assessing the Joint Toxicity of Chemical Mixtures Based on Luminescent Bacteria: A Systematic Review.

abstract：:Metagenomic sequencing with the Oxford Nanopore MinION sequencer offers potential for point-of-care testing of infectious diseases in clinical settings. To improve cost-effectiveness, multiplexing of several, barcoded samples upon a single flow cell will be required during sequencing. We generated a unique sequencing ...

journal_title：Frontiers in microbiology

authors： Xu Y,Lewandowski K,Lumley S,Pullan S,Vipond R,Carroll M,Foster D,Matthews PC,Peto T,Crook D

更新日期：2018-09-19 00:00:00

abstract：:Sulfate-reducing prokaryotes (SRP) are ubiquitous and quantitatively important members in many ecosystems, especially in marine sediments. However their abundance and diversity in subsurface marine sediments is poorly understood. In this study, the abundance and diversity of the functional genes for the enzymes adenos...

journal_title：Frontiers in microbiology

authors： Blazejak A,Schippers A

更新日期：2011-12-22 00:00:00

abstract：:The use of antibiotics in farm management (growing crops and raising animals) has become a major area of concern. Its implications is the consequent emergence of antibiotic resistant bacteria (ARB) and accordingly their access into the human food chain with passage of antibiotic resistance genes (ARG) to the normal hu...

journal_title：Frontiers in microbiology

authors： Osman K,Badr J,Al-Maary KS,Moussa IM,Hessain AM,Girah ZM,Abo-Shama UH,Orabi A,Saad A

更新日期：2016-11-22 00:00:00

abstract：:Singapore grouper iridovirus (SGIV) causes high mortality rates in mariculture, and effective treatments against SGIV infection are urgently required. Illicium verum Hook. f. (I. verum) is a well-known medicinal plant with a variety of biological activities. The natural ingredient quercetin isolated from I. verum coul...

journal_title：Frontiers in microbiology

authors： Liu M,Yu Q,Xiao H,Li M,Huang Y,Zhang Q,Li P

更新日期：2020-10-16 00:00:00

abstract：:The existence of an antisense Open Reading Frame (ORF) that encodes a putative AntiSense Protein (ASP) on the proviral genome of Human Immunodeficiency Virus type 1 (HIV-1) was a source of debate for 30 years. During the last years, some progresses have been made to characterize the cellular immune response against AS...

journal_title：Frontiers in microbiology

authors： Savoret J,Chazal N,Moles JP,Tuaillon E,Boufassa F,Meyer L,Lecuroux C,Lambotte O,Van De Perre P,Mesnard JM,Gross A

更新日期：2020-01-24 00:00:00

abstract：:The mechanism of DNA replication is one of the driving forces of genome evolution. Bacterial DNA polymerase III, the primary complex of DNA replication, consists of PolC and DnaE. PolC is conserved in Gram-positive bacteria, especially in the Firmicutes with low GC content, whereas DnaE is widely conserved in most Gra...

journal_title：Frontiers in microbiology

authors： Akashi M,Yoshikawa H

更新日期：2013-09-17 00:00:00

abstract：:A major issue for present HIV-1 research is to establish model systems that reflect or mimic viral replication and pathogenesis actually observed in infected humans. To this end, various strategies using macaques as infection targets have long been pursued. In particular, experimental infections of rhesus macaques by ...

journal_title：Frontiers in microbiology

authors： Doi N,Miura T,Mori H,Sakawaki H,Koma T,Adachi A,Nomaguchi M

更新日期：2018-10-18 00:00:00

abstract：:The activation of CD4(+) T helper cells is strictly dependent on the presentation of antigenic peptides by MHC class II (MHC-II) molecules. MHC-II expression is primarily regulated at the transcriptional level by the AIR-1 gene product CIITA (class II transactivator). Thus, CIITA plays a pivotal role in the triggering...

journal_title：Frontiers in microbiology

authors： Forlani G,Abdallah R,Accolla RS,Tosi G

更新日期：2013-08-22 00:00:00

abstract：:Fusarium Head Blight (FHB) is one of the most devastating diseases of cereals worldwide, threatening both crop production by affecting cereal grain development, and human and animal health by contaminating grains with mycotoxins. Despite that maize residues constitute the primary source of inoculum for Fusarium pathog...

journal_title：Frontiers in microbiology

authors： Cobo-Díaz JF,Baroncelli R,Le Floch G,Picot A

更新日期：2019-02-18 00:00:00

abstract：:Until 2007, Staphylococcus aureus from clonal complex 398 (CC398) was exclusively associated with livestock species and companion animals. Recently, several studies described the emergence of S. aureus CC398 as etiologies of severe infections in humans living in an animal-free environment. Recent sequencing efforts sh...

journal_title：Frontiers in microbiology

authors： Laumay F,Corvaglia AR,Diene SM,Girard M,Oechslin F,van der Mee-Marquet N,Entenza JM,François P

更新日期：2019-04-24 00:00:00

abstract：:Due to the high incidence of nosocomial Candida albicans infection, the first-line drugs for C. albicans infection have been heavily used, and the emergence of drug-resistant strains has gradually increased. Thus, a new antifungal drug or therapeutic method is needed. Chitosan, a product of chitin deacetylation, is co...

journal_title：Frontiers in microbiology

authors： Shih PY,Liao YT,Tseng YK,Deng FS,Lin CH

更新日期：2019-03-26 00:00:00

abstract：:Microbial symbionts account for survival, development, fitness and evolution of eukaryotic hosts. These microorganisms together with their host form a biological unit known as holobiont. Recent studies have revealed that the holobiont of agaves and cacti comprises a diverse and structured microbiome, which might be im...

journal_title：Frontiers in microbiology

authors： Flores-Núñez VM,Fonseca-García C,Desgarennes D,Eloe-Fadrosh E,Woyke T,Partida-Martínez LP

更新日期：2020-01-17 00:00:00

abstract：:Extremely cold environments are a challenge for all organisms. They are mostly inhabited by psychrophilic and psychrotolerant bacteria, which employ various strategies to cope with the cold. Such harsh environments are often highly vulnerable to the influence of external factors and may undergo frequent dynamic change...

journal_title：Frontiers in microbiology

authors： Dziewit L,Bartosik D

更新日期：2014-11-06 00:00:00

abstract：:Background/objectives: Whole genome sequencing (WGS) has proven to be a powerful subtyping tool for foodborne pathogenic bacteria like L. monocytogenes. The interests of genome-scale analysis for national surveillance, outbreak detection or source tracking has been largely documented. The genomic data however can be e...

journal_title：Frontiers in microbiology

authors： Henri C,Leekitcharoenphon P,Carleton HA,Radomski N,Kaas RS,Mariet JF,Felten A,Aarestrup FM,Gerner Smidt P,Roussel S,Guillier L,Mistou MY,Hendriksen RS

更新日期：2017-11-29 00:00:00

abstract：:Antimycotic chemosensitization and its mode of action are of growing interest. Currently, use of antifungal agents in agriculture and medicine has a number of obstacles. Foremost of these is development of resistance or cross-resistance to one or more antifungal agents. The generally high expense and negative impact, ...

journal_title：Frontiers in microbiology

authors： Campbell BC,Chan KL,Kim JH

更新日期：2012-02-29 00:00:00

abstract：:Simultaneous use of both heterotrophic and autotrophic metabolism ("mixotrophy") is common among protists. Strombidium rassoulzadegani is a planktonic mixotrophic marine ciliate that saves chloroplasts from its algal food and obtains a nutritional subsidy via photosynthesis. Cultures from the northeast, northwest, and...

journal_title：Frontiers in microbiology

authors： McManus GB,Schoener DM,Haberlandt K

更新日期：2012-09-04 00:00:00

abstract：:Nisin, an important bacteriocin from Lactococcus lactis subsp., is primarily active against various Gram-positive bacteria. Leucocin C, produced by Leuconostoc carnosum 4010, is a class IIa bacteriocin used to inhibit the growth of Listeria monocytogenes. Because two bacteriocins have different modes of action, the co...

journal_title：Frontiers in microbiology

authors： Fu Y,Mu D,Qiao W,Zhu D,Wang X,Liu F,Xu H,Saris P,Kuipers OP,Qiao M

更新日期：2018-03-23 00:00:00

abstract：:Cross-talk between the gut microbiota and neurochemicals affects health and well-being of animals. However, little is known about this interaction in chickens despite their importance in food production. Probiotics and live Salmonella vaccines are microbial products commonly given orally to layer pullets to improve he...

journal_title：Frontiers in microbiology

authors： Redweik GAJ,Daniels K,Severin AJ,Lyte M,Mellata M

更新日期：2020-01-15 00:00:00

abstract：:Mycobacterium tuberculosis (MTB) and non-tuberculous mycobacteria (NTM) are formidable causes of lung diseases throughout the world. While MTB is considered to be more virulent than NTM, host factors also play a key role in disease development. To elucidate whether there are differential immune responses to various my...

journal_title：Frontiers in microbiology

authors： Feng Z,Bai X,Wang T,Garcia C,Bai A,Li L,Honda JR,Nie X,Chan ED

更新日期：2020-02-07 00:00:00

abstract：:[This corrects the article DOI: 10.3389/fmicb.2019.03123.]. ...

journal_title：Frontiers in microbiology

authors： Armistead B,Whidbey C,Iyer LM,Herrero-Foncubierta P,Quach P,Haidour A,Aravind L,Cuerva JM,Jaspan HB,Rajagopal L

更新日期：2020-02-25 00:00:00

abstract：:The claudin family protein Fig1 is a unique fungal protein that is involved in pheromone-induced calcium influx and membrane fusion during the mating of Saccharomyces cerevisiae and Candida albicans. Whether and how Fig1 regulates Ca2+ homeostasis in response to extracellular stimuli is poorly understood. Previously, ...

journal_title：Frontiers in microbiology

authors： Qian H,Chen Q,Zhang S,Lu L

更新日期：2018-05-15 00:00:00

abstract：:The sulbactam resistance rate in Acinetobacter baumannii has increased worldwide. Previous reports have shown that the β-lactamase bla TEM-1 confers resistance to sulbactam in A. baumannii. The purpose of this study was to examine whether other β-lactamases, including the Acinetobacter-derived cephalosporinase (ADC), ...

journal_title：Frontiers in microbiology

authors： Kuo SC,Lee YT,Yang Lauderdale TL,Huang WC,Chuang MF,Chen CP,Su SC,Lee KR,Chen TL

更新日期：2015-03-25 00:00:00

abstract：:The contribution of ammonia-oxidizing bacteria and archaea (AOB and AOA, respectively) to the net oxidation of ammonia varies greatly between terrestrial environments. To better understand, predict and possibly manage terrestrial nitrogen turnover, we need to develop a conceptual understanding of ammonia oxidation as ...

journal_title：Frontiers in microbiology

authors： Daebeler A,Abell GC,Bodelier PL,Bodrossy L,Frampton DM,Hefting MM,Laanbroek HJ

更新日期：2012-10-04 00:00:00

abstract：:Five sublacustrine thermal spring locations from 1 to 109 m water depth in Yellowstone Lake were surveyed by 16S ribosomal RNA gene sequencing in relation to their chemical composition and dark CO(2) fixation rates. They harbor distinct chemosynthetic bacterial communities, depending on temperature (16-110°C) and elec...

journal_title：Frontiers in microbiology

authors： Yang T,Lyons S,Aguilar C,Cuhel R,Teske A

更新日期：2011-06-13 00:00:00

abstract：:Historically, disease progression in animal models of Q fever has been carried out using PCR to monitor the presence of Coxiella burnetii DNA in the host. However, the colonization and dissemination of other bacterial infections in animal models are tracked using viable counts, enabling an accurate assessment of viabl...

journal_title：Frontiers in microbiology

authors： Hartley MG,Ralph E,Norville IH,Prior JL,Atkins TP

更新日期：2019-07-16 00:00:00

abstract：:The Gram-negative opportunistic bacterium Acinetobacter baumannii is a significant cause of hospital-borne infections worldwide. Alarmingly, the rapid development of antimicrobial resistance coupled with the remarkable ability of isolates to persist on surfaces for extended periods of time has led to infiltration of A...

journal_title：Frontiers in microbiology

authors： Singh JK,Adams FG,Brown MH

更新日期：2019-01-09 00:00:00

abstract：:Certain acetic and lactic acid bacteria are major causes of quality defects in musts and wines, giving rise to defects such as a "vinegary," "sharp, like nail polish-remover" taste or preventing alcoholic and/or malolactic fermentation. Sulfur dioxide is the major tool currently used in the control of these bacteria i...

journal_title：Frontiers in microbiology

authors： Cordero-Bueso G,Moraga J,Ríos-Carrasco M,Ruiz-Muñoz M,Cantoral JM

更新日期：2020-01-23 00:00:00

abstract：:Previous studies have revealed inconsistent correlations between fungal diversity and plant/soil properties from local to global scales. Here, we investigated the internal relationships between soil fungal diversity and plant/soil properties on the Loess Plateau following vegetation restoration, using Illumina sequenc...

journal_title：Frontiers in microbiology

authors： Yang Y,Dou Y,Huang Y,An S

更新日期：2017-11-07 00:00:00

abstract：:While combinations of probiotics with antibiotics have exhibited beneficial and adverse effects in the treatment of Clostridium difficile infection (CDI), no substantive explanation has been provided for these effects. In this study, C. difficile ATCC 9689 (CD) was treated with Bifidobacterium breve (YH68) in combinat...

journal_title：Frontiers in microbiology

authors： Yang J,Yang H

更新日期：2018-12-04 00:00:00

abstract：:Currently, sulfate-reducing bacteria (SRB) is regarded as the main culprit of microbiologically influenced corrosion (MIC), mainly due to the low reported corrosion rates of other microorganisms. For example, the highest reported corrosion rate for methanogens is 0.065 mm/yr. However, by investigating methanogen-induc...

journal_title：Frontiers in microbiology

authors： An BA,Kleinbub S,Ozcan O,Koerdt A

更新日期：2020-03-31 00:00:00