Versatile phenotype-activated cell sorting.

Abstract:

:Unraveling the genetic and epigenetic determinants of phenotypes is critical for understanding and re-engineering biology and would benefit from improved methods to separate cells based on phenotypes. Here, we report SPOTlight, a versatile high-throughput technique to isolate individual yeast or human cells with unique spatiotemporal profiles from heterogeneous populations. SPOTlight relies on imaging visual phenotypes by microscopy, precise optical tagging of single target cells, and retrieval of tagged cells by fluorescence-activated cell sorting. To illustrate SPOTlight's ability to screen cells based on temporal properties, we chose to develop a photostable yellow fluorescent protein for extended imaging experiments. We screened 3 million cells expressing mutagenesis libraries and identified a bright new variant, mGold, that is the most photostable yellow fluorescent protein reported to date. We anticipate that the versatility of SPOTlight will facilitate its deployment to decipher the rules of life, understand diseases, and engineer new molecules and cells.

journal_name

Sci Adv

journal_title

Science advances

authors

Lee J,Liu Z,Suzuki PH,Ahrens JF,Lai S,Lu X,Guan S,St-Pierre F

doi

10.1126/sciadv.abb7438

subject

Has Abstract

pub_date

2020-10-23 00:00:00

issue

43

issn

2375-2548

pii

6/43/eabb7438

journal_volume

6

pub_type

杂志文章
  • Permafrost thawing puts the frozen carbon at risk over the Tibetan Plateau.

    abstract::Soil organic carbon (SOC) stored in permafrost across the high-latitude/altitude Northern Hemisphere represents an important potential carbon source under future warming. Here, we provide a comprehensive investigation on the spatiotemporal dynamics of SOC over the high-altitude Tibetan Plateau (TP), which has received...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aaz3513

    authors: Wang T,Yang D,Yang Y,Piao S,Li X,Cheng G,Fu B

    更新日期:2020-05-06 00:00:00

  • Persistent optical gating of a topological insulator.

    abstract::The spin-polarized surface states of topological insulators (TIs) are attractive for applications in spintronics and quantum computing. A central challenge with these materials is to reliably tune the chemical potential of their electrons with respect to the Dirac point and the bulk bands. We demonstrate persistent, b...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1500640

    authors: Yeats AL,Pan Y,Richardella A,Mintun PJ,Samarth N,Awschalom DD

    更新日期:2015-10-09 00:00:00

  • Ultimate suppression of thermal transport in amorphous silicon nitride by phononic nanostructure.

    abstract::Engineering the thermal conductivity of amorphous materials is highly essential for the thermal management of future electronic devices. Here, we demonstrate the impact of ultrafine nanostructuring on the thermal conductivity reduction of amorphous silicon nitride (a-Si3N4) thin films, in which the thermal transport i...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.abc0075

    authors: Tambo N,Liao Y,Zhou C,Ashley EM,Takahashi K,Nealey PF,Naito Y,Shiomi J

    更新日期:2020-09-25 00:00:00

  • SQR mediates therapeutic effects of H2S by targeting mitochondrial electron transport to induce mitochondrial uncoupling.

    abstract::Hydrogen sulfide (H2S) is a gasotransmitter and a potential therapeutic agent. However, molecular targets relevant to its therapeutic actions remain enigmatic. Sulfide-quinone oxidoreductase (SQR) irreversibly oxidizes H2S. Therefore, SQR is assumed to inhibit H2S signaling. We now report that SQR-mediated oxidation o...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aaz5752

    authors: Jia J,Wang Z,Zhang M,Huang C,Song Y,Xu F,Zhang J,Li J,He M,Li Y,Ao G,Hong C,Cao Y,Chin YE,Hua ZC,Cheng J

    更新日期:2020-08-26 00:00:00

  • Blue whales (Balaenoptera musculus) optimize foraging efficiency by balancing oxygen use and energy gain as a function of prey density.

    abstract::Terrestrial predators can modulate the energy used for prey capture to maximize efficiency, but diving animals face the conflicting metabolic demands of energy intake and the minimization of oxygen depletion during a breath hold. It is thought that diving predators optimize their foraging success when oxygen use and e...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1500469

    authors: Hazen EL,Friedlaender AS,Goldbogen JA

    更新日期:2015-10-02 00:00:00

  • Dual pH-sensitive nanodrug blocks PD-1 immune checkpoint and uses T cells to deliver NF-κB inhibitor for antitumor immunotherapy.

    abstract::The response to programmed cell death protein-1 (PD-1)/programmed death ligand-1 (PD-L1) blockade in cancer immunotherapy is limited because of multiple immune evasion mechanisms. Here, a previously unknown strategy is proposed to synergize the nuclear factor κB (NF-κB) inhibition and PD-1 blockade for antitumor immun...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aay7785

    authors: Xiao Z,Su Z,Han S,Huang J,Lin L,Shuai X

    更新日期:2020-02-05 00:00:00

  • Three-dimensional graphene/Pt nanoparticle composites as freestanding anode for enhancing performance of microbial fuel cells.

    abstract::Microbial fuel cells (MFCs) are able to directly convert about 50 to 90% of energy from oxidation of organic matters in waste to electricity and have great potential application in broad fields such as wastewater treatment. Unfortunately, the power density of the MFCs at present is significantly lower than the theoret...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1500372

    authors: Zhao S,Li Y,Yin H,Liu Z,Luan E,Zhao F,Tang Z,Liu S

    更新日期:2015-11-13 00:00:00

  • Mini-ISES identifies promising carbafructopyranose-based salens for asymmetric catalysis: Tuning ligand shape via the anomeric effect.

    abstract::This study introduces new methods of screening for and tuning chiral space and in so doing identifies a promising set of chiral ligands for asymmetric synthesis. The carbafructopyranosyl-1,2-diamine(s) and salens constructed therefrom are particularly compelling. It is shown that by removing the native anomeric effect...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1500066

    authors: Karukurichi KR,Fei X,Swyka RA,Broussy S,Shen W,Dey S,Roy SK,Berkowitz DB

    更新日期:2015-07-01 00:00:00

  • Nonequilibrium evolution of volatility in origination and extinction explains fat-tailed fluctuations in Phanerozoic biodiversity.

    abstract::Fluctuations in biodiversity, large and small, pervade the fossil record, yet we do not understand the processes generating them. Here, we extend theory from nonequilibrium statistical physics to describe the fat-tailed form of fluctuations in Phanerozoic marine invertebrate richness. Using this theory, known as super...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aat0122

    authors: Rominger AJ,Fuentes MA,Marquet PA

    更新日期:2019-06-26 00:00:00

  • Self-luminescent photodynamic therapy using breast cancer targeted proteins.

    abstract::Despite the potential of photodynamic therapy (PDT), its comprehensive use in cancer treatment has not been achieved because of the nondegradable risks of photosensitizing drugs and limits of light penetration and instrumentation. Here, we present bioluminescence (BL)-induced proteinaceous PDT (BLiP-PDT), through the ...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aba3009

    authors: Kim EH,Park S,Kim YK,Moon M,Park J,Lee KJ,Lee S,Kim YP

    更新日期:2020-09-11 00:00:00

  • A specialized flavone biosynthetic pathway has evolved in the medicinal plant, Scutellaria baicalensis.

    abstract::Wogonin and baicalein are bioactive flavones in the popular Chinese herbal remedy Huang-Qin (Scutellaria baicalensis Georgi). These specialized flavones lack a 4'-hydroxyl group on the B ring (4'-deoxyflavones) and induce apoptosis in a wide spectrum of human tumor cells in vitro and inhibit tumor growth in vivo in di...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1501780

    authors: Zhao Q,Zhang Y,Wang G,Hill L,Weng JK,Chen XY,Xue H,Martin C

    更新日期:2016-04-08 00:00:00

  • Cooperative deformation in high-entropy alloys at ultralow temperatures.

    abstract::High-entropy alloys exhibit exceptional mechanical properties at cryogenic temperatures, due to the activation of twinning in addition to dislocation slip. The coexistence of multiple deformation pathways raises an important question regarding how individual deformation mechanisms compete or synergize during plastic d...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aax4002

    authors: Naeem M,He H,Zhang F,Huang H,Harjo S,Kawasaki T,Wang B,Lan S,Wu Z,Wang F,Wu Y,Lu Z,Zhang Z,Liu CT,Wang XL

    更新日期:2020-03-27 00:00:00

  • Iron is neurotoxic in retinal detachment and transferrin confers neuroprotection.

    abstract::In retinal detachment (RD), photoreceptor death and permanent vision loss are caused by neurosensory retina separating from the retinal pigment epithelium because of subretinal fluid (SRF), and successful surgical reattachment is not predictive of total visual recovery. As retinal iron overload exacerbates cell death ...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aau9940

    authors: Daruich A,Le Rouzic Q,Jonet L,Naud MC,Kowalczuk L,Pournaras JA,Boatright JH,Thomas A,Turck N,Moulin A,Behar-Cohen F,Picard E

    更新日期:2019-01-09 00:00:00

  • SAVI: Synthetic apertures for long-range, subdiffraction-limited visible imaging using Fourier ptychography.

    abstract::Synthetic aperture radar is a well-known technique for improving resolution in radio imaging. Extending these synthetic aperture techniques to the visible light domain is not straightforward because optical receivers cannot measure phase information. We propose to use macroscopic Fourier ptychography (FP) as a practic...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1602564

    authors: Holloway J,Wu Y,Sharma MK,Cossairt O,Veeraraghavan A

    更新日期:2017-04-14 00:00:00

  • Touch-induced seedling morphological changes are determined by ethylene-regulated pectin degradation.

    abstract::How mechanical forces regulate plant growth is a fascinating and long-standing question. After germination underground, buried seedlings have to dynamically adjust their growth to respond to mechanical stimulation from soil barriers. Here, we designed a lid touch assay and used atomic force microscopy to investigate t...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.abc9294

    authors: Wu Q,Li Y,Lyu M,Luo Y,Shi H,Zhong S

    更新日期:2020-11-27 00:00:00

  • Synchronous crop failures and climate-forced production variability.

    abstract::Large-scale modes of climate variability can force widespread crop yield anomalies and are therefore often presented as a risk to food security. We quantify how modes of climate variability contribute to crop production variance. We find that the El Niño Southern Oscillation (ENSO), the Indian Ocean Dipole (IOD), trop...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aaw1976

    authors: Anderson WB,Seager R,Baethgen W,Cane M,You L

    更新日期:2019-07-03 00:00:00

  • Integrated textile sensor patch for real-time and multiplex sweat analysis.

    abstract::Wearable sweat analysis devices for monitoring of multiple health-related biomarkers with high sensitivity are highly desired for noninvasive and real-time monitoring of human health. Here, we report a flexible sweat analysis patch based on a silk fabric-derived carbon textile for simultaneous detection of six health-...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aax0649

    authors: He W,Wang C,Wang H,Jian M,Lu W,Liang X,Zhang X,Yang F,Zhang Y

    更新日期:2019-11-08 00:00:00

  • Extensive tissue-specific expression variation and novel regulators underlying circadian behavior.

    abstract::Natural genetic variation affects circadian rhythms across the evolutionary tree, but the underlying molecular mechanisms are poorly understood. We investigated population-level, molecular circadian clock variation by generating >700 tissue-specific transcriptomes of Drosophila melanogaster (w1118 ) and 141 Drosophila...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.abc3781

    authors: Litovchenko M,Meireles-Filho ACA,Frochaux MV,Bevers RPJ,Prunotto A,Anduaga AM,Hollis B,Gardeux V,Braman VS,Russeil JMC,Kadener S,Dal Peraro M,Deplancke B

    更新日期:2021-01-29 00:00:00

  • Translatable mitochondria-targeted protection against programmed cardiovascular dysfunction.

    abstract::The prenatal origins of heart disease in offspring have been established. However, research in species with developmental milestones comparable to humans is lacking, preventing translation of this knowledge to clinical contexts. Using sheep and chickens, two species with similar cardiovascular developmental milestones...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.abb1929

    authors: Botting KJ,Skeffington KL,Niu Y,Allison BJ,Brain KL,Itani N,Beck C,Logan A,Murray AJ,Murphy MP,Giussani DA

    更新日期:2020-08-19 00:00:00

  • Macrophage centripetal migration drives spontaneous healing process after spinal cord injury.

    abstract::Traumatic spinal cord injury (SCI) brings numerous inflammatory cells, including macrophages, from the circulating blood to lesions, but pathophysiological impact resulting from spatiotemporal dynamics of macrophages is unknown. Here, we show that macrophages centripetally migrate toward the lesion epicenter after inf...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aav5086

    authors: Kobayakawa K,Ohkawa Y,Yoshizaki S,Tamaru T,Saito T,Kijima K,Yokota K,Hara M,Kubota K,Matsumoto Y,Harimaya K,Ozato K,Masuda T,Tsuda M,Tamura T,Inoue K,Edgerton VR,Iwamoto Y,Nakashima Y,Okada S

    更新日期:2019-05-15 00:00:00

  • Polarization recovery through scattering media.

    abstract::The control and use of light polarization in optical sciences and engineering are widespread. Despite remarkable developments in polarization-resolved imaging for life sciences, their transposition to strongly scattering media is currently not possible, because of the inherent depolarization effects arising from multi...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1600743

    authors: de Aguiar HB,Gigan S,Brasselet S

    更新日期:2017-09-01 00:00:00

  • Early formation of planetary building blocks inferred from Pb isotopic ages of chondrules.

    abstract::The most abundant components of primitive meteorites (chondrites) are millimeter-sized glassy spherical chondrules formed by transient melting events in the solar protoplanetary disk. Using Pb-Pb dates of 22 individual chondrules, we show that primary production of chondrules in the early solar system was restricted t...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1700407

    authors: Bollard J,Connelly JN,Whitehouse MJ,Pringle EA,Bonal L,Jørgensen JK,Nordlund Å,Moynier F,Bizzarro M

    更新日期:2017-08-09 00:00:00

  • Charge-switchable polymeric complex for glucose-responsive insulin delivery in mice and pigs.

    abstract::Glucose-responsive insulin delivery systems with robust responsiveness that has been validated in animal models, especially in large animal models, remain elusive. Here, we exploit a new strategy to form a micro-sized complex between a charge-switchable polymer with a glucose-sensing moiety and insulin driven by elect...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aaw4357

    authors: Wang J,Yu J,Zhang Y,Zhang X,Kahkoska AR,Chen G,Wang Z,Sun W,Cai L,Chen Z,Qian C,Shen Q,Khademhosseini A,Buse JB,Gu Z

    更新日期:2019-07-10 00:00:00

  • Label-free surface-sensitive photonic microscopy with high spatial resolution using azimuthal rotation illumination.

    abstract::Surface plasmon resonance microscopy (SPRM) with single-direction illumination is a powerful platform for biomedical imaging because of its wide-field, label-free, and high-surface-sensitivity imaging capabilities. However, two disadvantages prevent wider use of SPRM. The first is its poor spatial resolution that can ...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aav5335

    authors: Kuai Y,Chen J,Tang X,Xiang Y,Lu F,Kuang C,Xu L,Shen W,Cheng J,Gui H,Zou G,Wang P,Ming H,Liu J,Liu X,Lakowicz JR,Zhang D

    更新日期:2019-03-29 00:00:00

  • Response thresholds in bacterial chemotaxis.

    abstract::Stimulation of Escherichia coli by exponential ramps of chemoattractants generates step changes in the concentration of the response regulator, CheY-P. Because flagellar motors are ultrasensitive, this should change the fraction of time that motors spin clockwise, the CWbias. However, early work failed to show changes...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1500299

    authors: Lele PP,Shrivastava A,Roland T,Berg HC

    更新日期:2015-10-16 00:00:00

  • The polar regions in a 2°C warmer world.

    abstract::Over the past decade, the Arctic has warmed by 0.75°C, far outpacing the global average, while Antarctic temperatures have remained comparatively stable. As Earth approaches 2°C warming, the Arctic and Antarctic may reach 4°C and 2°C mean annual warming, and 7°C and 3°C winter warming, respectively. Expected consequen...

    journal_title:Science advances

    pub_type: 杂志文章,评审

    doi:10.1126/sciadv.aaw9883

    authors: Post E,Alley RB,Christensen TR,Macias-Fauria M,Forbes BC,Gooseff MN,Iler A,Kerby JT,Laidre KL,Mann ME,Olofsson J,Stroeve JC,Ulmer F,Virginia RA,Wang M

    更新日期:2019-12-04 00:00:00

  • Designing durable icephobic surfaces.

    abstract::Ice accretion has a negative impact on critical infrastructure, as well as a range of commercial and residential activities. Icephobic surfaces are defined by an ice adhesion strength τice < 100 kPa. However, the passive removal of ice requires much lower values of τice, such as on airplane wings or power lines (τice ...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1501496

    authors: Golovin K,Kobaku SP,Lee DH,DiLoreto ET,Mabry JM,Tuteja A

    更新日期:2016-03-11 00:00:00

  • Ketones and aldehydes as alkyl radical equivalents for C─H functionalization of heteroarenes.

    abstract::The polar nature of the C═O bond commonly allows it to undergo direct attack by nucleophiles at the electrophilic carbon atom in which ketones and aldehydes act as alkyl carbocation equivalents. In contrast, transformations in which ketones and aldehydes act as alkyl radical equivalents (generated in carbonyl carbon) ...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aax9955

    authors: Dong J,Wang Z,Wang X,Song H,Liu Y,Wang Q

    更新日期:2019-10-11 00:00:00

  • Iron isotope evidence for very rapid accretion and differentiation of the proto-Earth.

    abstract::Nucleosynthetic isotope variability among solar system objects provides insights into the accretion history of terrestrial planets. We report on the nucleosynthetic Fe isotope composition (μ54Fe) of various meteorites and show that the only material matching the terrestrial composition is CI (Ivuna-type) carbonaceous ...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.aay7604

    authors: Schiller M,Bizzarro M,Siebert J

    更新日期:2020-02-12 00:00:00

  • Mesocrystalline calcium silicate hydrate: A bioinspired route toward elastic concrete materials.

    abstract::Calcium silicate hydrate (C-S-H) is the binder in concrete, the most used synthetic material in the world. The main weakness of concrete is the lack of elasticity and poor flexural strength considerably limiting its potential, making reinforcing steel constructions necessary. Although the properties of C-S-H could be ...

    journal_title:Science advances

    pub_type: 杂志文章

    doi:10.1126/sciadv.1701216

    authors: Picker A,Nicoleau L,Burghard Z,Bill J,Zlotnikov I,Labbez C,Nonat A,Cölfen H

    更新日期:2017-11-29 00:00:00