Distinct composition signatures of archaeal and bacterial phylotypes in the Wanda Glacier forefield, Antarctic Peninsula.

abstract：:Qualitative and quantitative changes of microbial communities in soil microcosms during bioremediation were determined throughout one year. The soil was contaminated with 0%, 2.5%, 5%, 10% (wt/wt) of petrochemical sludge containing polynuclear aromatic hydrocarbons. We analyzed the hydrocarbon concentration in the mic...

journal_title：FEMS microbiology ecology

authors： Del Panno MT,Morelli IS,Engelen B,Berthe-Corti L

更新日期：2005-07-01 00:00:00

abstract：:Methanogenic cultures were enriched from an air-dried rice field soil and incubated under anaerobic conditions at 30 degrees C with cellulose as substrate (ET1). The culture was then transferred and further incubated at either 15 degrees C (E15) or 30 degrees C (E30), to establish stable cultures that methanogenically...

journal_title：FEMS microbiology ecology

authors： Chin K,Lukow T,Stubner S,Conrad R

更新日期：1999-12-01 00:00:00

abstract：:Occurrence of entomopathogenic fungi on phylloplanes in Tilia × europaea crowns between 1 and 13 m was assessed in urban parks. Prevalence of fungal infections in ladybirds (Coleoptera: Coccinellidae) collected from Tilia × europaea was assessed to determine whether fungi found on phylloplanes also occurred as infecti...

journal_title：FEMS microbiology ecology

authors： Howe AG,Ravn HP,Jensen AB,Meyling NV

更新日期：2016-09-01 00:00:00

abstract：:Anaerobic digestion of olive mill wastewaters is generally performed in anaerobic contact bioreactors where the removal of toxic phenols is often unsatisfactory. In the present work we show that a granular activated carbon packed-bed biofilm reactor can be successfully used to achieve effective and reproducible wastew...

journal_title：FEMS microbiology ecology

authors： Bertin L,Colao MC,Ruzzi M,Fava F

更新日期：2004-06-01 00:00:00

abstract：:A major obstacle in the molecular investigation of natural, especially oceanic, microbial cells is their adequate preservation for further land-based molecular analyses. Here, we examined the use of microwaves for cell fixation before high-speed flow cytometric sorting to define the metaproteomes and metagenomes of ke...

journal_title：FEMS microbiology ecology

authors： Mary I,Oliver A,Skipp P,Holland R,Topping J,Tarran G,Scanlan DJ,O'Connor CD,Whiteley AS,Burkill PH,Zubkov MV

更新日期：2010-10-01 00:00:00

abstract：:In disease-suppressive soil, plants rely upon mutualistic associations between roots and specific microbes for nutrient acquisition and disease suppression. Notably, the transmission of suppressiveness by the cysts of sugar beet cyst nematode from suppressive to conducive soils has been previously observed in greenhou...

journal_title：FEMS microbiology ecology

authors： Hussain M,Hamid MI,Tian J,Hu J,Zhang X,Chen J,Xiang M,Liu X

更新日期：2018-10-01 00:00:00

abstract：:Riverine biofilms remain one of the least-studied habitats despite the significant increase in the examination of aquatic microbial communities in recent years. In this study, the dynamics of epilithic biofilm communities native on rocks from a low-order upland stream were examined over a period of 3 years. Spatial an...

journal_title：FEMS microbiology ecology

authors： Anderson-Glenna MJ,Bakkestuen V,Clipson NJ

更新日期：2008-06-01 00:00:00

abstract：:The planktonic microbial communities of Lakes Hoare and Bonney were investigated during transition into winter. We hypothesized that the onset of darkness induces changes in the functional role of autotrophic and heterotrophic microplankton. Bacteria decreased in Lake Hoare during March-April, while in Lake Bonney bac...

journal_title：FEMS microbiology ecology

authors： Thurman J,Parry J,Hill PJ,Priscu JC,Vick TJ,Chiuchiolo A,Laybourn-Parry J

更新日期：2012-11-01 00:00:00

abstract：:Green turtles (Chelonia mydas) are endangered marine herbivores that break down food particles, primarily sea grasses, through microbial fermentation. However, the microbial community and its role in health and disease is still largely unexplored. In this study, we investigated and compared the fecal bacterial communi...

journal_title：FEMS microbiology ecology

authors： Ahasan MS,Waltzek TB,Huerlimann R,Ariel E

更新日期：2017-12-01 00:00:00

abstract：:Phase-separation and -segregation (boiling/distillation of subseafloor hydrothermal fluids) represent the primary mechanisms causing intra-field variations in vent fluid compositions. To determine whether this geochemical process affects the formation of microbial communities, we examined the microbial communities at ...

journal_title：FEMS microbiology ecology

authors： Nakagawa S,Takai K,Inagaki F,Chiba H,Ishibashi J,Kataoka S,Hirayama H,Nunoura T,Horikoshi K,Sako Y

更新日期：2005-09-01 00:00:00

abstract：:The spatial distribution of marine protistan communities in the presence of organic macroaggregates, formed from natural seawater, was studied in several microcosm experiments. The presence of macroaggregates had two main effects. First, the size of the communities of bacteria, flagellates and ciliates increased, as t...

journal_title：FEMS microbiology ecology

authors： Artolozaga I I,Ayo B,Latatu A,Azúa I I,Unanue M,Iriberri J

更新日期：2000-09-01 00:00:00

abstract：:The bias of widely used degenerate nifH-specific primer sets was first tested using denaturing gradient gel electrophoresis (DGGE), and their application for profiling of complex communities assessed for roots of Oryza longistaminata. When primers (P) with mismatches at nondegenerate positions were used on genomic DNA...

journal_title：FEMS microbiology ecology

authors： Demba Diallo M,Reinhold-Hurek B,Hurek T

更新日期：2008-08-01 00:00:00

abstract：:Many studies demonstrate the importance of the commensal microbiomes to animal health and development. However, the initial community assembly process is poorly understood. It is unclear to what extent the hosts select for their commensal microbiota, whether stochastic processes contribute, and how environmental condi...

journal_title：FEMS microbiology ecology

authors： Vestrum RI,Attramadal KJK,Vadstein O,Gundersen MS,Bakke I

更新日期：2020-09-01 00:00:00

abstract：:This study analysed the nitrifier community in the biofilter of a zero discharge, recirculating aquaculture system (RAS) for the production of marine shrimp in a low density (low ammonium production) system. The ammonia-oxidizing populations were examined by targeting 16S rRNA and amoA genes of ammonia-oxidizing bacte...

journal_title：FEMS microbiology ecology

authors： Brown MN,Briones A,Diana J,Raskin L

更新日期：2013-01-01 00:00:00

abstract：:Land plants directly contact soil through their roots. An enormous diversity of microbes dwelling in root-associated zones, including endosphere (inside root), rhizoplane (root surface) and rhizosphere (soil surrounding the root surface), play essential roles in ecosystem functioning and plant health. Rice is a staple...

journal_title：FEMS microbiology ecology

authors： Ding LJ,Cui HL,Nie SA,Long XE,Duan GL,Zhu YG

更新日期：2019-05-01 00:00:00

abstract：:Phototrophic iron(II) [Fe(II)]-oxidizing bacteria are present in modern environments and evidence suggests that this metabolism was present already on early earth. We determined Fe(II) oxidation rates depending on pH, temperature, light intensity, and Fe(II) concentration for three phylogenetically different phototrop...

journal_title：FEMS microbiology ecology

authors： Hegler F,Posth NR,Jiang J,Kappler A

更新日期：2008-11-01 00:00:00

abstract：:Microbial communities of ancient Mediterranean sapropels, buried sediment layers of high organic matter, were analyzed by most probable number (MPN) approaches. Mineral media containing different carbon sources in sub-millimolar concentrations were used. MPN numbers were elevated in sapropels and at the sediment surfa...

journal_title：FEMS microbiology ecology

authors： Süss J,Engelen B,Cypionka H,Sass H

更新日期：2004-12-27 00:00:00

abstract：:Managed agricultural ecosystems are unique systems where crops and microbes are intrinsically linked. This study focuses on discerning microbiome successional patterns across all plant organs and tests for evidence of niche differentiation along temporal and spatial axes. Soybean plants were grown in an environmental ...

journal_title：FEMS microbiology ecology

authors： Moroenyane I,Tremblay J,Yergeau É

更新日期：2021-01-08 00:00:00

abstract：:The terms 'brûlé' and 'burnt' are used to describe vegetation-devoid areas of the ground around a range of woody plants interacting with certain truffle species. Increasing interest is currently focused on a systematic search for and study of volatile organic compounds (VOCs) emitted by truffles in the course of their...

journal_title：FEMS microbiology ecology

authors： Streiblová E,Gryndlerová H,Gryndler M

更新日期：2012-04-01 00:00:00

abstract：:The Pseudomonas genus, which includes environmental and pathogenic species, is known to present antibiotic resistances, and can receive resistance genes from multi-resistant enteric bacteria released into the environment via faecal rejects. This study was aimed to investigate the resistome of Pseudomonas populations t...

journal_title：FEMS microbiology ecology

authors： Camiade M,Bodilis J,Chaftar N,Riah-Anglet W,Gardères J,Buquet S,Ribeiro AF,Pawlak B

更新日期：2020-02-01 00:00:00

abstract：:In tomato soilless culture, plant-disease optimal control and growth promotion are achieved when the rhizosphere is heavily colonized by the biocontrol agent Pythium oligandrum. Discrepancies in performance are generally attributed to the poor persistence of P. oligandrum on roots. In this study, three selected strain...

journal_title：FEMS microbiology ecology

authors： Le Floch G,Tambong J,Vallance J,Tirilly Y,Lévesque A,Rey P

更新日期：2007-08-01 00:00:00

abstract：:Filamentous Chloroflexi species are often present in activated sludge wastewater treatment plants in relatively low numbers, although bulking incidences caused by Chloroflexi filaments have been observed. A new species-specific gene probe for FISH was designed and using phylum-, subdivision-, morphotype 1851- and spec...

journal_title：FEMS microbiology ecology

authors： Kragelund C,Levantesi C,Borger A,Thelen K,Eikelboom D,Tandoi V,Kong Y,van der Waarde J,Krooneman J,Rossetti S,Thomsen TR,Nielsen PH

更新日期：2007-03-01 00:00:00

abstract：:The polychlorinated biphenyl (PCB)-degrading Pseudomonas sp. B4 was tested for its motility and ability to sense and respond to biphenyl, its chloroderivatives and chlorobenzoates in chemotaxis assays. Pseudomonas sp. B4 was attracted to biphenyl, PCBs and benzoate in swarm plate and capillary assays. Chemotaxis towar...

journal_title：FEMS microbiology ecology

authors： Gordillo F,Chávez FP,Jerez CA

更新日期：2007-05-01 00:00:00

abstract：:Microbial communities of extreme environments have often been assumed to have low species richness. We analysed 18S rRNA gene signatures in a sample collected below the chemocline of the anoxic Mariager Fjord in Denmark, and from these data we computed novel parametric and standard nonparametric estimates of protistan...

journal_title：FEMS microbiology ecology

authors： Zuendorf A,Bunge J,Behnke A,Barger KJ,Stoeck T

更新日期：2006-12-01 00:00:00

abstract：:Mountains have a long history in the study of diversity. Like macroscopic taxa, soil microbes are hypothesized to be strongly structured by montane gradients, and recently there has been important progress in understanding how microbes are shaped by these conditions. Here, we summarize this literature and synthesize p...

journal_title：FEMS microbiology ecology

authors： Looby CI,Martin PH

更新日期：2020-09-01 00:00:00

abstract：:The microbial communities of in situ reactor columns degrading benzene with sulfate as an electron acceptor were analyzed based on clone libraries and terminal restriction fragment length polymorphism fingerprinting of PCR-amplified 16S rRNA genes. The columns were filled with either lava granules or sand particles an...

journal_title：FEMS microbiology ecology

authors： Kleinsteuber S,Schleinitz KM,Breitfeld J,Harms H,Richnow HH,Vogt C

更新日期：2008-10-01 00:00:00

abstract：:The relative genetic diversity of microcystin-producing Microcystis in the water and sediment of the Daechung Reservoir, Korea, was investigated over an entire year, including the cyanobacterial bloom season. The cells of potentially toxic Microcystis strains containing mcyJ genotypes and cells containing the genus-sp...

journal_title：FEMS microbiology ecology

authors： Kim SG,Joung SH,Ahn CY,Ko SR,Boo SM,Oh HM

更新日期：2010-10-01 00:00:00

abstract：:While Hymenoscyphus fraxineus causes dieback of the European ash (Fraxinus excelsior), flowering ash (F. ornus) appears resistant to the pathogen. To date, contributions of endophytic fungi to host resistance are unknown. The following hypotheses were tested: (i) endophytic fungi enhance the resistance of F. excelsior...

journal_title：FEMS microbiology ecology

authors： Schlegel M,Dubach V,von Buol L,Sieber TN

更新日期：2016-09-01 00:00:00

abstract：:Kinetoplastid flagellates, microscopically often detected from various aquatic environments and considered ubiquitous are seldom reported in molecular diversity studies with universal eukaryote DNA primers. To investigate this inconsistency, we examined nanoflagellate diversity in Lake Biwa, Japan by 18S rRNA gene clo...

journal_title：FEMS microbiology ecology

authors： Mukherjee I,Hodoki Y,Nakano S

更新日期：2015-08-01 00:00:00

abstract：:We combined denaturing gradient gel electrophoresis (DGGE), catalysed reporter deposition-FISH (CARD-FISH) and clone libraries to investigate the seasonality of the bacterial assemblage composition in north-west Mediterranean coastal waters. DGGE analysis indicated that bacterial diversity changed gradually throughout...

journal_title：FEMS microbiology ecology

authors： Alonso-Sáez L,Balagué V,Sà EL,Sánchez O,González JM,Pinhassi J,Massana R,Pernthaler J,Pedrós-Alió C,Gasol JM

更新日期：2007-04-01 00:00:00