Real-time brightfield, darkfield, and phase contrast imaging in a light-emitting diode array microscope.

Abstract:

:We demonstrate a single-camera imaging system that can simultaneously acquire brightfield, darkfield, and phase contrast images in real time. Our method uses computational illumination via a programmable light-emitting diode (LED) array at the source plane, providing flexible patterning of illumination angles. Brightfield, darkfield, and differential phase contrast images are obtained by changing the LED patterns, without any moving parts. Previous work with LED array illumination was only valid for static samples because the hardware speed was not fast enough to meet real-time acquisition and processing requirements. Here, we time multiplex patterns for each of the three contrast modes in order to image dynamic biological processes in all three contrast modes simultaneously. We demonstrate multicontrast operation at the maximum frame rate of our camera (50 Hz with 2160 × 2560 pixels).

journal_name

J Biomed Opt

authors

Liu Z,Tian L,Liu S,Waller L

doi

10.1117/1.JBO.19.10.106002

subject

Has Abstract

pub_date

2014-01-01 00:00:00

pages

106002

issue

10

eissn

1083-3668

issn

1560-2281

pii

1913607

journal_volume

19

pub_type

杂志文章
  • Using thermographic cameras to investigate eye temperature and clinical severity in depression.

    abstract::Previous studies suggest that altered corneal temperature may be a feature of schizophrenia, but the association between major depressive disorder (MDD) and corneal temperature has yet to be assessed. The aim of this study is to investigate whether eye temperature is different among MDD patients than among healthy ind...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.21.2.026001

    authors: Maller JJ,George SS,Viswanathan RP,Fitzgerald PB,Junor P

    更新日期:2016-02-01 00:00:00

  • Time-dependent blood flow and oxygenation in human skeletal muscles measured with noninvasive near-infrared diffuse optical spectroscopies.

    abstract::We have employed near-infrared optical methods to measure noninvasively the dynamics of muscle blood flow and oxygen saturation (StO2) during cuff occlusion and plantar flexion exercise. Relative muscle oxygen consumption (rVO2) was also computed from these data. Diffuse correlation spectroscopy provides information a...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.1884603

    authors: Yu G,Durduran T,Lech G,Zhou C,Chance B,Mohler ER 3rd,Yodh AG

    更新日期:2005-03-01 00:00:00

  • Blood oxygen flux estimation with a combined photoacoustic and high-frequency ultrasound microscopy system: a phantom study.

    abstract::The metabolic rate of oxygen consumption, an important indicator of tissue metabolism, can be expressed as the change of net blood oxygen flux into and out of a tissue region per 100 g of tissue. In this work, we propose a photoacoustic and Doppler ultrasound method for imaging local blood oxygen flux of a single vess...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.17.3.036012

    authors: Jiang Y,Forbrich A,Harrison T,Zemp RJ

    更新日期:2012-03-01 00:00:00

  • Re-evaluation of model-based light-scattering spectroscopy for tissue spectroscopy.

    abstract::Model-based light scattering spectroscopy (LSS) seemed a promising technique for in-vivo diagnosis of dysplasia in multiple organs. In the studies, the residual spectrum, the difference between the observed and modeled diffuse reflectance spectra, was attributed to single elastic light scattering from epithelial nucle...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.3116708

    authors: Lau C,Sćepanović O,Mirkovic J,McGee S,Yu CC,Fulghum S,Wallace M,Tunnell J,Bechtel K,Feld M

    更新日期:2009-03-01 00:00:00

  • Nanophotothermolysis of multiple scattered cancer cells with carbon nanotubes guided by time-resolved infrared thermal imaging.

    abstract::Nanophotothermolysis with long laser pulses for treatment of scattered cancer cells and their clusters is introduced with the main focus on real-time monitoring of temperature dynamics inside and around individual cancer cells labeled with carbon nanotubes. This technique utilizes advanced time- and spatially-resolved...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.3119135

    authors: Biris AS,Boldor D,Palmer J,Monroe WT,Mahmood M,Dervishi E,Xu Y,Li Z,Galanzha EI,Zharov VP

    更新日期:2009-03-01 00:00:00

  • Monitoring hemodynamic and morphologic responses to closed head injury in a mouse model using orthogonal diffuse near-infrared light reflectance spectroscopy.

    abstract::The authors' aim is to assess and quantitatively measure brain hemodynamic and morphological variations during closed-head injury (CHI) in mice using orthogonal diffuse near-infrared reflectance spectroscopy (o-DRS). CHI is a type of injury to the head that does not penetrate the skull. Usually, it is caused by mechan...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.18.4.045003

    authors: Abookasis D,Shochat A,Mathews MS

    更新日期:2013-04-01 00:00:00

  • Potential of optical microangiography to monitor cerebral blood perfusion and vascular plasticity following traumatic brain injury in mice in vivo.

    abstract::Optical microanglography (OMAG) is a recently developed imaging modality capable of volumetric imaging of dynamic blood perfusion, down to capillary level resolution, with an imaging depth up to 2.00 mm beneath the tissue surface. We report the use of OMAG to monitor the cerebral blood flow (CBF) over the cortex of mo...

    journal_title:Journal of biomedical optics

    pub_type: 信件

    doi:10.1117/1.3207121

    authors: Jia Y,Alkayed N,Wang RK

    更新日期:2009-07-01 00:00:00

  • Dynamics of retinal photocoagulation and rupture.

    abstract::In laser retinal photocoagulation, short (<20 ms) pulses have been found to reduce thermal damage to the inner retina, decrease treatment time, and minimize pain. However, the safe therapeutic window (defined as the ratio of power for producing a rupture to that of mild coagulation) decreases with shorter exposures. T...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.3130282

    authors: Sramek C,Paulus Y,Nomoto H,Huie P,Brown J,Palanker D

    更新日期:2009-05-01 00:00:00

  • Generalized Beer-Lambert model for near-infrared light propagation in thick biological tissues.

    abstract::The attenuation of near-infrared (NIR) light intensity as it propagates in a turbid medium like biological tissue is described by modified the Beer–Lambert law (MBLL). The MBLL is generally used to quantify the changes in tissue chromophore concentrations for NIR spectroscopic data analysis. Even though MBLL is effect...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.21.7.076012

    authors: Bhatt M,Ayyalasomayajula KR,Yalavarthy PK

    更新日期:2016-07-01 00:00:00

  • Molecular interactions of exogenous chemical agents with collagen--implications for tissue optical clearing.

    abstract::Reduction of optical scattering in turbid biological tissues using nonreactive chemical agents has potential applications for light-based diagnostics and therapeutics. Optical clearing effects by exogenous chemical agents, in particular sugars and sugar alcohols, have been found to be temporary with tissue rehydration...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章,评审

    doi:10.1117/1.2166381

    authors: Yeh AT,Hirshburg J

    更新日期:2006-01-01 00:00:00

  • Water wavenumber calibration for visible light optical coherence tomography.

    abstract:SIGNIFICANCE:Visible light optical coherence tomography (OCT) is emerging for spectroscopic and ultrahigh resolution imaging, but challenges remain. Depth-dependent dispersion limits retinal image quality and current correction approaches are cumbersome. Inconsistent group refractive indices during image reconstruction...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.25.9.090501

    authors: Zhang T,Kho AM,Srinivasan VJ

    更新日期:2020-09-01 00:00:00

  • Modeling optical behavior of birefringent biological tissues for evaluation of quantitative polarized light microscopy.

    abstract::Quantitative polarized light microscopy (qPLM) is a popular tool for the investigation of birefringent architectures in biological tissues. Collagen, the most abundant protein in mammals, is such a birefringent material. Interpretation of results of qPLM in terms of collagen network architecture and anisotropy is chal...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.3241986

    authors: van Turnhout MC,Kranenbarg S,van Leeuwen JL

    更新日期:2009-09-01 00:00:00

  • Quantitative assessment of radiation-induced changes of bladder and rectum collagen structure using optical methods.

    abstract::The objective of the study is the quantitative analysis of the dose-time dependences of changes occurring in collagen of bladder and rectum after gamma-irradiation using optical methods [nonlinear microscopy in a second harmonic generation (SHG) detection regime and cross-polarization optical coherence tomography (CP ...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.23.9.091417

    authors: Kochueva M,Dudenkova V,Kuznetsov S,Varlamova A,Sergeeva E,Kiseleva E,Maslennikova A

    更新日期:2018-08-01 00:00:00

  • Photon pathlength determination based on spatially resolved diffuse reflectance.

    abstract::A method for the prediction of the average photon pathlength in turbid media has been developed. The method is based on spatially resolved diffuse reflectance with discrete source detector distances up to 2 mm. Light reflectance was simulated using a Monte Carlo technique with a one-layer model utilizing a wide range ...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.1482378

    authors: Nilsson H,Larsson M,Nilsson GE,Strömberg T

    更新日期:2002-07-01 00:00:00

  • Modulated electron-multiplied fluorescence lifetime imaging microscope: all-solid-state camera for fluorescence lifetime imaging.

    abstract::We have built an all-solid-state camera that is directly modulated at the pixel level for frequency-domain fluorescence lifetime imaging microscopy (FLIM) measurements. This novel camera eliminates the need for an image intensifier through the use of an application-specific charge coupled device design in a frequency-...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.jbo.17.12.126020

    authors: Zhao Q,Schelen B,Schouten R,van den Oever R,Leenen R,van Kuijk H,Peters I,Polderdijk F,Bosiers J,Raspe M,Jalink K,Geert Sander de Jong J,van Geest B,Stoop K,Young IT

    更新日期:2012-12-01 00:00:00

  • Cortical spreading depression produces long-term disruption of activity-related changes in cerebral blood volume and neurovascular coupling.

    abstract::Cortical spreading depression (CSD) is a pronounced depolarization of neurons and glia that spreads slowly across the cortex followed by a period of depressed electrophysiological activity. The vascular changes associated with CSD are a large transient increase in blood flow followed by a prolonged decrease lasting gr...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.1852556

    authors: Guiou M,Sheth S,Nemoto M,Walker M,Pouratian N,Ba A,Toga AW

    更新日期:2005-01-01 00:00:00

  • Correlation between asymmetry of spontaneous oscillation of hemodynamic changes in the prefrontal cortex and anxiety levels: a near-infrared spectroscopy study.

    abstract::According to the valence asymmetry hypothesis, the left/right asymmetry of prefrontal cortex (PFC) activity is correlated with specific emotional responses to mental stress and personality traits. Here, we evaluated the relation between emotional state and asymmetry in PFC activity at rest by using near-infrared spect...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.19.2.027005

    authors: Ishikawa W,Sato M,Fukuda Y,Matsumoto T,Takemura N,Sakatani K

    更新日期:2014-02-01 00:00:00

  • Detection of breast surgical margins with optical coherence tomography imaging: a concept evaluation study.

    abstract::This study aimed to evaluate the concept of using high-resolution optical coherence tomography (OCT) imaging to rapidly assess surgical specimens and determine if cancer positive margins were left behind in the surgical bed. A mouse model of breast cancer was used in this study. Surgical specimens from 30 animals were...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.19.5.056001

    authors: Savastru D,Chang EW,Miclos S,Pitman MB,Patel A,Iftimia N

    更新日期:2014-05-01 00:00:00

  • Motion-compensated noncontact imaging photoplethysmography to monitor cardiorespiratory status during exercise.

    abstract::With the advance of computer and photonics technology, imaging photoplethysmography [(PPG), iPPG] can provide comfortable and comprehensive assessment over a wide range of anatomical locations. However, motion artifact is a major drawback in current iPPG systems, particularly in the context of clinical assessment. To ...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.3602852

    authors: Sun Y,Hu S,Azorin-Peris V,Greenwald S,Chambers J,Zhu Y

    更新日期:2011-07-01 00:00:00

  • Effect of noise on modulation amplitude and phase in frequency-domain diffusive imaging.

    abstract::We theoretically investigate the effect of noise on frequency-domain heterodyne and/or homodyne measurements of intensity-modulated beams propagating through diffusive media, such as a photon density wave. We assumed that the attenuated amplitude and delayed phase are estimated by taking the Fourier transform of the n...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.17.1.016010

    authors: Kang D,Kupinski MA

    更新日期:2012-01-01 00:00:00

  • Real-time oncological guidance using diffuse reflectance spectroscopy in electrosurgery: the effect of coagulation on tissue discrimination.

    abstract::In breast surgery, a lack of knowledge about what is below the tissue surface may lead to positive tumor margins and iatrogenic damage. Diffuse reflectance spectroscopy (DRS) is a spectroscopic technique that can distinguish between healthy and tumor tissue making it a suitable technology for intraoperative guidance. ...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.23.11.115004

    authors: Adank MW,Fleischer JC,Dankelman J,Hendriks BHW

    更新日期:2018-11-01 00:00:00

  • Effect of probe pressure on cervical fluorescence spectroscopy measurements.

    abstract::Fluorescence spectroscopy is a promising technology for detection of epithelial precancers and cancers. While age and menopausal status influence measurements in the cervix, other variables do not significantly affect the diagnosis. In this study we examine probe pressure as a variable. A fiber optic probe to measure ...

    journal_title:Journal of biomedical optics

    pub_type: 临床试验,杂志文章

    doi:10.1117/1.1695562

    authors: Nath A,Rivoire K,Chang S,Cox D,Atkinson EN,Follen M,Richards-Kortum R

    更新日期:2004-05-01 00:00:00

  • Design of synchrotron light source and its beamline dedicated to dual-energy x-ray computed tomography.

    abstract::A synchrotron light source dedicated to medical applications has been designed at National Institute of Radiological Sciences. The storage ring, with circumference of 80 m, is designed for acceleration of 2.3 GeV and a stored current of 420 mA. It is equipped with two multipole wigglers to produce sufficient photon fl...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.1383062

    authors: Torikoshi M,Tsunoo T,Endo M,Noda K,Kumada M,Yamada S,Soga F,Hyodo K

    更新日期:2001-07-01 00:00:00

  • Identification of abnormal motor cortex activation patterns in children with cerebral palsy by functional near-infrared spectroscopy.

    abstract::We demonstrate the utility of functional near-infrared spectroscopy (fNIRS) as a tool for physicians to study cortical plasticity in children with cerebral palsy (CP). Motor cortex activation patterns were studied in five healthy children and five children with CP (8.4+/-2.3 years old in both groups) performing a fing...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.3432746

    authors: Khan B,Tian F,Behbehani K,Romero MI,Delgado MR,Clegg NJ,Smith L,Reid D,Liu H,Alexandrakis G

    更新日期:2010-05-01 00:00:00

  • Ex vivo optical metabolic measurements from cultured tissue reflect in vivo tissue status.

    abstract::Optical measurements of metabolism are ideally acquired in vivo; however, intravital measurements are often impractical. Accurate ex vivo assessments would greatly broaden the applicability of optical measurements of metabolism. We investigate the use of live tissue culture experiments to serve as a surrogate for in v...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.17.11.116015

    authors: Walsh AJ,Poole KM,Duvall CL,Skala MC

    更新日期:2012-11-01 00:00:00

  • Simulating the scanning of a focused beam through scattering media using a numerical solution of Maxwell's equations.

    abstract::A highly efficient method based on Maxwell's theory was developed, which enables the calculation of the scanning of a focused beam through scattering media. Maxwell's equations were numerically solved in two dimensions using finite difference time domain simulations. The modeling of the focused beam was achieved by ap...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.19.7.071404

    authors: Elmaklizi A,Schäfer J,Kienle A

    更新日期:2014-07-01 00:00:00

  • Proposed method for internal electron therapy based on high-intensity laser acceleration.

    abstract::Radiotherapy is one of the main methods to treat cancer. However, due to the propagation pattern of high-energy photons in tissue and their inability to discriminate between healthy and malignant tissues, healthy tissues may also be damaged, causing undesired side effects. A possible method for internal electron thera...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.20.5.051041

    authors: Tepper M,Barkai U,Gannot I

    更新日期:2015-05-01 00:00:00

  • Quantitative phase microscopy of articular chondrocyte dynamics by wide-field digital interferometry.

    abstract::We experimentally implement label-free phase microscopy using wide-field digital interferometry (WFDI) techniques to retrieve quantitative volumetric data of articular chondrocyte dynamics. Using the scanless interferometric system, we visualize chondrocyte swelling and bursting induced by hypo-osmotic pressure. Recon...

    journal_title:Journal of biomedical optics

    pub_type: 信件

    doi:10.1117/1.3290242

    authors: Shaked NT,Finan JD,Guilak F,Wax A

    更新日期:2010-01-01 00:00:00

  • In vivo near-infrared dual-axis confocal microendoscopy in the human lower gastrointestinal tract.

    abstract::Near-infrared confocal microendoscopy is a promising technique for deep in vivo imaging of tissues and can generate high-resolution cross-sectional images at the micron-scale. We demonstrate the use of a dual-axis confocal (DAC) near-infrared fluorescence microendoscope with a 5.5-mm outer diameter for obtaining clini...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.17.2.021102

    authors: Piyawattanametha W,Ra H,Qiu Z,Friedland S,Liu JT,Loewke K,Kino GS,Solgaard O,Wang TD,Mandella MJ,Contag CH

    更新日期:2012-02-01 00:00:00

  • Quantitative performance characterization of three-dimensional noncontact fluorescence molecular tomography.

    abstract::Fluorescent proteins and dyes are routine tools for biological research to describe the behavior of genes, proteins, and cells, as well as more complex physiological dynamics such as vessel permeability and pharmacokinetics. The use of these probes in whole body in vivo imaging would allow extending the range and scop...

    journal_title:Journal of biomedical optics

    pub_type: 杂志文章

    doi:10.1117/1.JBO.21.2.026009

    authors: Favicchio R,Psycharakis S,Schönig K,Bartsch D,Mamalaki C,Papamatheakis J,Ripoll J,Zacharakis G

    更新日期:2016-02-01 00:00:00