Abstract:
:As the speed and accuracy of genome sequencing improves, there are ever-increasing resources available for the design and construction of synthetic DNA parts. These can be used to engineer plant genomes to produce new functions or to elucidate the function of endogenous sequences. Until recently the assembly of amplified or cloned sequences into large and complex designs was a limiting step in plant synthetic biology and biotechnology. A number of new methods for assembling DNA molecules have been developed in the last few years, several of which have been applied to the production of molecules used to modify plant genomes.
journal_name
Curr Opin Plant Bioljournal_title
Current opinion in plant biologyauthors
Patron NJdoi
10.1016/j.pbi.2014.02.004subject
Has Abstractpub_date
2014-06-01 00:00:00pages
14-9eissn
1369-5266issn
1879-0356pii
S1369-5266(14)00020-Xjournal_volume
19pub_type
杂志文章,评审abstract::During the past decade, molecular genetic studies on the reference plant Arabidopsis have established a largely linear signal transduction pathway for the response to ethylene gas. The biochemical modes of action of many of the signaling components are still unresolved. During the past year, however, progress in sever...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2003.11.011
更新日期:2004-02-01 00:00:00
abstract::During development, the behavior of cells in tissues is coordinated along specific orientations or directions by coordinating the polar localization of components in those cells. The coordination of such cell polarity is perhaps nowhere more spectacular than in developing leaves, where the polarity of hundreds of cell...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2017.09.009
更新日期:2018-02-01 00:00:00
abstract::Messenger RNA (mRNA) can move through the vascular system in plants. Until recently the transport of mRNA had been demonstrated only for a few well-documented cases, leading to the suggestion that transport was selective and specific. The extent of this long-distance transport has now been shown to be on the genomic s...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2017.11.001
更新日期:2018-06-01 00:00:00
abstract::Polyploidy plays a significant role in the evolution of flowering plants. Understanding the effects of polyploidy on the epigenetic regulation of adaptive traits may resolve questions about the success of polyploids. One such trait, flowering time, has been the subject of several gene expression studies because it has...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2011.03.008
更新日期:2011-04-01 00:00:00
abstract::Significant advances in the genetic dissection of brassinosteroid biosynthesis and signaling have been made during the past few years. Genetic and biochemical data have helped to elucidate the pathways of biosynthesis of brassinolide, the most active brassinosteroid. In addition, several models have been put forward f...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(99)00038-2
更新日期:2000-02-01 00:00:00
abstract::To control the abundance of plasma membrane receptors and transporters is crucial for proper perception and response to extracellular signals from surrounding cells and the environment. Posttranslational modification of plasma membrane proteins, especially ubiquitin conjugation or ubiquitylation, is key for the determ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2017.07.003
更新日期:2017-12-01 00:00:00
abstract::Transcription factors (TFs) are a group of proteins that control cellular processes by regulating the expression of downstream target genes. Recent progress has been made in the cloning and characterization of Arabidopsis TFs on the genome scale, especially on the cloning of open reading frames (ORFs), sequence analys...
journal_title:Current opinion in plant biology
pub_type: 杂志文章
doi:10.1016/j.pbi.2006.07.005
更新日期:2006-10-01 00:00:00
abstract::Directional cell-to-cell transport of functional molecules, called polar transport, enables plants to sense and respond to developmental and environmental signals. Transporters that localize to plasma membranes (PMs) in a polar manner are key components of these systems. PIN-FORMED (PIN) auxin efflux carriers, which a...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2017.06.012
更新日期:2017-12-01 00:00:00
abstract::Amino acids represent the major transport form of reduced nitrogen in plants. Long-distance transport of amino acids occurs in the xylem and the phloem. However, the phloem is the main transport route for bulk flow of the organic nitrogen from source leaves to sink tissues. Phloem loading in leaves of most annual plan...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2017.12.002
更新日期:2018-06-01 00:00:00
abstract::Although next-generation sequencing (NGS) technology has enabled the decoding of many crop species genomes, most of the underlying genetic components for economically important crop traits remain to be determined. Network approaches have proven useful for the study of the reference plant, Arabidopsis thaliana, and the...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2015.02.001
更新日期:2015-04-01 00:00:00
abstract::Quantification of genotype-to-phenotype associations is central to many scientific investigations, yet the ability to obtain consistent results may be thwarted without appropriate statistical analyses. Models for association can consider confounding effects in the materials and complex genetic interactions. Selecting ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2015.02.010
更新日期:2015-04-01 00:00:00
abstract::Platforms for the development of synthetic chromosomes in plants have been produced in several species using telomere mediated chromosomal truncation with the simultaneous inclusion of sites that facilitate further additions to the newly generated minichromosome. By utilizing truncated supernumerary or B chromosomes, ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2014.05.009
更新日期:2014-06-01 00:00:00
abstract::Recent studies on the differential expression of genes associated with leaf senescence support the long-standing interpretation of plant senescence as an organized, genetically controlled process. Sequence identities of genes that are differentially expressed in senescing leaves indicate roles in the salvage of nutrie...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(98)80131-3
更新日期:1998-02-01 00:00:00
abstract::Endogenous peptide ligand-receptor systems regulate cell-cell communications in various developmental processes in plants. Recent studies have revealed that the peptide-receptor combinations are not simply one-on-one with single roles. One peptide activates multiple downstream signaling through different receptors, wh...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2014.07.011
更新日期:2014-10-01 00:00:00
abstract::Variation in grass architecture profoundly affects light capture, competition, and reproductive success, and is responsive to environmental factors such as crowding and nutrient limitation. Recent work in both model and crop systems has uncovered many aspects of the genetic control of branching, including conservation...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.11.015
更新日期:2007-02-01 00:00:00
abstract::Plant cells sense, weigh and integrate various endogenous and exogenous cues in order to optimize acclimation and resource allocation. The thiol/disulfide redox network appears to be in the core of this versatile integration process. In plant cells its complexity exceeds by far that of other organisms. Recent research...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2011.12.002
更新日期:2012-06-01 00:00:00
abstract::Agriculture faces enormous challenges including the need to substantially increase productivity, reduce environmental footprint, and deliver renewable alternatives that are being addressed by developing new oil crops for the future. The efforts include domestication of Lepidium spp. using genomics-aided breeding as a ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2019.12.003
更新日期:2020-08-01 00:00:00
abstract::All the above-ground organs of a plant are derived from stem cells that reside in shoot apical meristems (SAM). Over the past 25 years, the genetic pathways that control the proliferation of stem cells within the SAM, and the differentiation of their progenitors into lateral organs, have been described in great detail...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2020.08.008
更新日期:2020-12-01 00:00:00
abstract::Plants require calcium, magnesium, nitrogen, phosphorous, potassium and sulfur in relatively large amounts (>0.1% of dry mass) and each of these so-called macronutrients is essential for a plant to complete its life cycle. Normally, these minerals are taken up by plant roots from the soil solution in ionic form with t...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2009.04.003
更新日期:2009-06-01 00:00:00
abstract::Climbing plants have voluble organs, for example, tendrils and modified stems, which twine up neighboring plants to reach the canopy. These organs perform exaggerated circumnutation, during which they grow towards the shaded areas of the forest (skototropism) to find a host. In response to mechanical stimulus, they gr...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2020.101982
更新日期:2021-01-01 00:00:00
abstract::Correct positioning and active movement of organelles within cells are essential for cellular homeostasis and adaptation to external stresses. Unlike animal and fungal systems, plant organelle positioning has not yet been revealed at the molecular level. The recent development of organelle-targeting green fluorescent ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2004.09.005
更新日期:2004-12-01 00:00:00
abstract::RNA-seq, the measurement of steady-state RNA levels by next generation sequencing, has enabled quantitative transcriptome analyses of complex traits in many species without requiring the parallel sequencing of their genomes. The complex trait of C4 photosynthesis, which increases photosynthetic efficiency via a bioche...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2016.03.007
更新日期:2016-06-01 00:00:00
abstract::In contrast to animals, gametes in plants form a separate haploid generation, the gametophyte. The female gametophyte of flowering plants consists of just four different cell types that play distinct roles in the reproductive process. Differentiation of the distinct cell fates is tightly controlled and appears to foll...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2007.07.011
更新日期:2007-12-01 00:00:00
abstract::The pathway of starch synthesis in the cereal endosperm is unique, and requires enzyme isoforms that are not present in other cereal tissues or non-cereal plants. Recent information on the functions of individual enzyme isoforms has provided insight into how the linear chains and branch linkages in cereal starch are s...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(03)00042-6
更新日期:2003-06-01 00:00:00
abstract::Medicago truncatula will be among the first plant species to benefit from the completion of a whole-genome sequencing project. For each of these species, Arabidopsis, rice and now poplar and Medicago, annotation, the process of identifying gene structures and defining their functions, is essential for the research com...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.01.004
更新日期:2006-04-01 00:00:00
abstract::Virulence factors are molecules that enable plant pathogens to infect and colonize host tissues successfully. These molecules co-evolve with host genes to ensure functionality and to avoid recognition by the host immune system. Some pathogens also produce the plant growth hormone cytokinin (CK) and other plant hormone...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2018.03.002
更新日期:2018-08-01 00:00:00
abstract::Growth of fungal hyphae is guided by a variety of chemical gradients, including nutrients, mating pheromones or host compounds. Over 100 years after chemotropism was first reported in fungus-plant interactions, our knowledge on the host signals, fungal receptors and cellular pathways is still rudimentary. Genetic anal...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2015.07.004
更新日期:2015-08-01 00:00:00
abstract::The plant hormones salicylic acid (SA), jasmonic acid (JA), and ethylene (ET) are major players in the regulation of signaling networks that are involved in induced defense responses against pathogens and insects. During the past two years, significant progress has been made in understanding the function of NON-EXPRES...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2004.05.006
更新日期:2004-08-01 00:00:00
abstract::Small RNA (sRNA) induces RNA interference (RNAi) in almost all eukaryotes. While sRNAs can move within an organism, they can also move between interacting organisms to induce gene silencing, a phenomenon called 'cross-kingdom RNAi'. Some sRNAs from pathogens or pests move into host cells and suppress host immunity in...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2017.05.003
更新日期:2017-08-01 00:00:00
abstract::S-nitrosylation, the covalent attachment of a nitric oxide (NO) moiety to a protein cysteine thiol to form an S-nitrosothiol (SNO) is rapidly emerging as a prototypic, redox-based post-translational modification during plant immune function. Here we review recently identified targets for S-nitrosylation and the conseq...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2012.03.005
更新日期:2012-08-01 00:00:00