Proteomic changes in the roots of germinating Phaseolus vulgaris seeds in response to chilling stress and post-stress recovery.

Abstract:

:Plants respond to different environmental cues in a complex way, entailing changes at the cellular and physiological levels. An important step to understand the molecular foundation of stress response in plants is the analysis of stress-responsive proteins. In this work we attempted to investigate and compare changes in the abundance of proteins in the roots of bean (Phaseolus vulgaris L.) germinating under long continuous chilling conditions (10°C, 16 days), exposed to short rapid chilling during germination (10°C, 24h), as well as subjected to recovery from stress (25°C, 24h). The results we obtained indicate that germination under continuous chilling causes alterations in the accumulation of the proteins involved in stress response, energy production, translation, vesicle transport, secondary metabolism and protein degradation. The subsequent recovery influences the accumulation of the proteins implicated in calcium-dependent signal transduction pathways, secondary metabolism and those promoting cell division and expansion. Subjecting the germinating bean seeds to short rapid chilling stress resulted in a transient changes in the relative content of the proteins taking part in energy production, DNA repair, RNA processing and translation. Short stress triggers also the mechanisms of protection against oxidative stress and promotes expression of anti-stress proteins. Subjecting bean seeds to the subsequent recovery influences the abundance of the proteins involved in energy metabolism, protection against stress and production of phytohormones. The exposure to long and short chilling did not result in the alterations of any proteins common to both treatments. The same situation was observed with respect to the recovery after stresses. Bean response to chilling is therefore strongly correlated with the manner and length of exposure to low temperature, which causes divergent proteomic alterations in the roots.

journal_name

J Plant Physiol

authors

Badowiec A,Weidner S

doi

10.1016/j.jplph.2013.10.020

subject

Has Abstract

pub_date

2014-03-15 00:00:00

pages

389-98

issue

6

eissn

0176-1617

issn

1618-1328

pii

S0176-1617(13)00456-2

journal_volume

171

pub_type

杂志文章
  • Reduction of geomagnetic field (GMF) to near null magnetic field (NNMF) affects some Arabidopsis thaliana clock genes amplitude in a light independent manner.

    abstract::Plant endogenous clock consists of self-sustained interlocked transcriptional/translational feedback loops whose oscillation regulates many circadian processes, including gene expression. Its free running rhythm can be entrained by external cues, which can influence all clock parameters. Among external cues, the geoma...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2018.11.008

    authors: Agliassa C,Maffei ME

    更新日期:2019-01-01 00:00:00

  • Magnesium and manganese interactively modulate parthenolide accumulation and the antioxidant defense system in the leaves of Tanacetum parthenium.

    abstract::A balanced nutrient supply is a critical factor affecting accumulation of terpenoids in plants, yet data related to the interactive effects of two essential nutrients for the biosynthesis of sesquiterpenes are scarce. Here, the interactional effects between magnesium (Mg) and manganese (Mn) on plant growth, oxidative ...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2016.06.017

    authors: Farzadfar S,Zarinkamar F,Behmanesh M,Hojati M

    更新日期:2016-09-01 00:00:00

  • PDH45 transgenic rice maintain cell viability through lower accumulation of Na(+), ROS and calcium homeostasis in roots under salinity stress.

    abstract::Salinity severely affects the growth/productivity of rice, which is utilized as major staple food crop worldwide. PDH45 (pea DNA helicase 45), a member of the DEAD-box helicase family, actively provides salinity stress tolerance, but the mechanism behind this is not well known. Therefore, in order to understand the me...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2015.11.008

    authors: Nath M,Yadav S,Kumar Sahoo R,Passricha N,Tuteja R,Tuteja N

    更新日期:2016-02-01 00:00:00

  • Application of a genome walking method for the study of the spinach Lhcb1 multigene family.

    abstract::We describe the application of a novel genome walking (GW) strategy for the one-shot identification of members of multigene families. The method was used to study the spinach Lhcb1 family (encoding the light harvesting complex protein Lhcb1), for which three cDNAs were known. Two additional genes and regulatory region...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2009.06.020

    authors: Leoni C,Volpicella M,Placido A,Gallerani R,Ceci LR

    更新日期:2010-01-15 00:00:00

  • Mitochondria from leaf mesophyll cells of C(4) plants are deficient in the H protein of glycine decarboxylase complex.

    abstract::Mesophyll mitochondria from green leaves of the C(4) plants Zea mays (NADP-ME-type), Panicum miliaceum (NAD-ME-type) and Panicum maximum (PEP-CK-type) oxidized NADH, malate and succinate at relatively high rates with respiratory control, but glycine was not oxidized. Among the mitochondrial proteins involved in glycin...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2007.07.015

    authors: Parys E,Jastrzebski H

    更新日期:2008-07-07 00:00:00

  • Nicotiana benthamiana Matrix Metalloprotease 1 (NMMP1) gene confers disease resistance to Phytophthora infestans in tobacco and potato plants.

    abstract::We previously isolated Nicotiana benthamiana matrix metalloprotease 1 (NMMP1) from tobacco leaves. The NMMP1 gene encodes a highly conserved, Zn-containing catalytic protease domain that functions as a factor in the plant's defense against bacterial pathogens. Expression of NMMP1 was strongly induced during interactio...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2017.08.010

    authors: Ha JH,Jang HA,Moon KB,Baek KH,Choi GJ,Choi D,Cho HS,Kwon SY,Jeon JH,Oh SK,Kim HS

    更新日期:2017-11-01 00:00:00

  • The fluid-mosaic membrane theory in the context of photosynthetic membranes: Is the thylakoid membrane more like a mixed crystal or like a fluid?

    abstract::Since the publication of the fluid-mosaic membrane theory by Singer and Nicolson in 1972 generations of scientists have adopted this fascinating concept for all biological membranes. Assuming the membrane as a fluid implies that the components embedded in the lipid bilayer can freely diffuse like swimmers in a water b...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.jplph.2020.153246

    authors: Wilhelm C,Goss R,Garab G

    更新日期:2020-09-01 00:00:00

  • Glycolate oxidase isoforms are distributed between the bundle sheath and mesophyll tissues of maize leaves.

    abstract::Glycolate oxidase (EC 1.1.3.15) activity was detected both in the bundle sheath (79%) and mesophyll (21%) tissues of maize leaves. Three peaks of glycolate oxidase activity were separated from maize leaves by the linear KCl gradient elution from the DEAE-Toyopearl column. The first peak corresponded to the glycolate o...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1078/0176-1617-01105

    authors: Popov VN,Dmitrieva EA,Eprintsev AT,Igamberdiev AU

    更新日期:2003-08-01 00:00:00

  • Light is a positive regulator of strigolactone levels in tomato roots.

    abstract::Strigolactones (SLs) or closely related molecules were recently identified as phytohormones, acting as long-distance branching factors that suppress growth of pre-formed axillary buds in the shoot. The SL signaling pathways and light appear to be connected, as SLs were shown to induce light-regulated pathways and to m...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2011.05.022

    authors: Koltai H,Cohen M,Chesin O,Mayzlish-Gati E,Bécard G,Puech V,Ben Dor B,Resnick N,Wininger S,Kapulnik Y

    更新日期:2011-11-01 00:00:00

  • A homolog of the defender against apoptotic death gene (DAD1) in senescing gladiolus petals is down-regulated prior to the onset of programmed cell death.

    abstract::We isolated a homolog of the potential anti-apoptotic gene, defender against apoptotic death (DAD1) from gladiolus petals as full-length cDNA (GlDAD1), and investigated the relationship between its expression and the execution processes of programmed cell death (PCD) in senescing petals. RNA gel blotting showed that G...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2004.06.005

    authors: Yamada T,Takatsu Y,Kasumi M,Marubashi W,Ichimura K

    更新日期:2004-11-01 00:00:00

  • Chlororespiration and tolerance to drought, heat and high illumination.

    abstract::Sun (Chrysanthemum morifolium) and shade (Spathiphyllum wallisii) plants were used to study the effects of drought, heat and high illumination. The stress conditions caused a greater accumulation of hydrogen peroxide in Chrysanthemum morifolium than in Spathiphyllum wallisii leaves. They also resulted in down-regulati...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2009.12.013

    authors: Ibáñez H,Ballester A,Muñoz R,Quiles MJ

    更新日期:2010-06-15 00:00:00

  • Amelioration of salinity stress by exogenously applied spermidine or spermine in three varieties of indica rice differing in their level of salt tolerance.

    abstract::We present here the comparative protective potentiality of exogenously applied polyamines (PAs), namely spermidine (Spd) and spermine (Spm), in mitigating NaCl toxicity and inducing short-term salinity tolerance in three indica rice varieties, namely M-1-48 (salt-sensitive), Nonabokra (salt-tolerant) and Gobindobhog (...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2010.07.009

    authors: Roychoudhury A,Basu S,Sengupta DN

    更新日期:2011-03-01 00:00:00

  • Immunolocalization of a class III chitinase in two muskmelon cultivars reacting differently to Fusarium oxysporum f. sp. melonis.

    abstract::Fusarium oxysporum f. sp. melonis is a highly specialized fungus that attacks the root system of melon (Cucumis melo L.). In this work the presence of a class III chitinase was examined by immunological techniques in the root and stem base of a susceptible (cv. Galia) and a resistant (cv. Bredor) melon during the infe...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2005.02.004

    authors: Baldé JA,Francisco R,Queiroz A,Regalado AP,Ricardo CP,Veloso MM

    更新日期:2006-01-01 00:00:00

  • The impact of cold on photosynthesis in genotypes of Coffea spp.--photosystem sensitivity, photoprotective mechanisms and gene expression.

    abstract::Environmental constraints disturb plant metabolism and are often associated with photosynthetic impairments and yield reductions. Among them, low positive temperatures are of up most importance in tropical plant species, namely in Coffea spp. in which some acclimation ability has been reported. To further explain cold...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2010.11.013

    authors: Batista-Santos P,Lidon FC,Fortunato A,Leitão AE,Lopes E,Partelli F,Ribeiro AI,Ramalho JC

    更新日期:2011-05-15 00:00:00

  • Ion Efflux from Pulvinar Cells during Slow Downward Movement of the Petiole of Mimosa pudica L. Induced by Photostimulation.

    abstract::Change of extracellular ion concentration in the main pulvinus of Mimosa pudica L. during a slow downward movement induced by white light (0.24 mW cm(-2)) was investigated using K(+)- and Cl(-)-selective electrodes and a pH electrode. The photostimulation induced a transient and concurrent efflux of K(+) and Cl(-) fro...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/S0176-1617(84)80043-7

    authors: Kumon K,Tsurumi S

    更新日期:1984-08-01 00:00:00

  • Characterization of the putative amino acid transporter genes AtCAT2, 3 &4: the tonoplast localized AtCAT2 regulates soluble leaf amino acids.

    abstract::The plant vacuole constitutes a large transient storage compartment for nutrients, proteins and metabolites, and is a major cellular sink for toxic waste compounds. Amino acids can cross the vacuolar membrane via specific transport proteins, which are molecularly not well characterized. Two members of a small subfamil...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2013.11.012

    authors: Yang H,Krebs M,Stierhof YD,Ludewig U

    更新日期:2014-05-01 00:00:00

  • Structural changes in the vascular bundles of light-exposed and shaded spruce needles suffering from Mg deficiency and ozone pollution.

    abstract::The correlation between structural changes of the vascular bundles and needle yellowing was examined for needles of damaged spruce (Picea abies (L.) Karst.) growing at a Mg-deficient and ozone polluted mountain site in the Central Black Forest (840m a.s.l.). In the previous year's sun-exposed needles, the following se...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2005.03.008

    authors: Boxler-Baldoma C,Lütz C,Heumann HG,Siefermann-Harms D

    更新日期:2006-02-01 00:00:00

  • Tomato plants use non-enzymatic antioxidant pathways to cope with moderate UV-A/B irradiation: A contribution to the use of UV-A/B in horticulture.

    abstract::Plants developed receptors for solar UV-A/B radiation, which regulate a complex network of functions through the plant's life cycle. However, greenhouse grown crops, like tomato, are exposed to strongly reduced UV radiation, contrarily to their open-field counterparts. A new paradigm of modern horticulture is to suppl...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2017.11.013

    authors: Mariz-Ponte N,Mendes RJ,Sario S,Ferreira de Oliveira JMP,Melo P,Santos C

    更新日期:2018-02-01 00:00:00

  • Increases in jasmonic acid caused by indole-3-acetic acid and auxin herbicides in cleavers (Galium aparine).

    abstract::The effects of indole-3-acetic acid and auxin herbicides on endogenous jasmonic acid (JA) concentrations were studied in relation to changes in ethylene and abscisic acid (ABA) levels in cleavers (Galium aparine). When plants were root-treated with increasing concentrations of indole-3-acetic acid (IAA), ethylene bios...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2003.12.002

    authors: Grossmann K,Rosenthal C,Kwiatkowski J

    更新日期:2004-07-01 00:00:00

  • Ozone responsive genes in Medicago truncatula: analysis by suppression subtraction hybridization.

    abstract::Acute ozone is a model abiotic elicitor of oxidative stress in plants. In order to identify genes that are important for conferring ozone resistance or sensitivity we used two accessions of Medicago truncatula with contrasting responses to this oxidant. We used suppression subtraction hybridization (SSH) to identify g...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2009.01.009

    authors: Puckette M,Peal L,Steele J,Tang Y,Mahalingam R

    更新日期:2009-08-15 00:00:00

  • High temperature effects on photosynthetic activity of two tomato cultivars with different heat susceptibility.

    abstract::The functional activities of the photosynthetic apparatus of two tomato cultivars of different thermotolerance were investigated after a short period of high temperature treatment. Seedlings of two tomato genotypes, Lycopersicon esculentum var. Campbell-28 and the wild thermotolerant Nagcarlang, were grown under a pho...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2004.07.014

    authors: Camejo D,Rodríguez P,Morales MA,Dell'Amico JM,Torrecillas A,Alarcón JJ

    更新日期:2005-03-01 00:00:00

  • Analysis of the soluble cell wall proteome of gymnosperms.

    abstract::We analyzed the cell wall proteome of lignifying suspension cell cultures (SCCs) from four gymnosperms that differ in evolution degree. This analysis showed the presence of "peptide sequence tags" (PSTs) corresponding to glucan endo-1,3-beta-D-glucosidase, xyloglucan-endotrans-glucosylase/hydrolase, chitinases, thauma...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2008.11.009

    authors: Uzal EN,Gómez-Ros LV,Hernández JA,Pedreño MA,Cuello J,Ros Barceló A

    更新日期:2009-05-15 00:00:00

  • Molecular cloning and characterisation of SaCLCa1, a novel protein of the chloride channel (CLC) family from the halophyte Suaeda altissima (L.) Pall.

    abstract::The SaCLCa1 gene, a putative orthologue of AtCLCa, the Arabidopsis thaliana gene encoding a NO3-/H+ antiporter, was cloned from the halophyte Suaeda altissima. It belonged to the CLC family, comprising anionic channels and anion/H+ antiporters. SaCLCa1 ion specificity was studied by heterologous expression of this gen...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2019.152995

    authors: Nedelyaeva OI,Shuvalov AV,Karpichev IV,Beliaev DV,Myasoedov NA,Khalilova LA,Khramov DE,Popova LG,Balnokin YV

    更新日期:2019-09-01 00:00:00

  • Changes in the salinity tolerance of sweet pepper plants as affected by nitrogen form and high CO2 concentration.

    abstract::The assimilation and availability of nitrogen in its different forms can significantly affect the response of primary productivity under the current atmospheric alteration and soil degradation. An elevated CO2 concentration (e[CO2]) triggers changes in the efficiency and efficacy of photosynthetic processes, water use...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2016.05.020

    authors: Piñero MC,Pérez-Jiménez M,López-Marín J,Del Amor FM

    更新日期:2016-08-01 00:00:00

  • Calcium binding properties of calcium dependent protein kinase 1 (CaCDPK1) from Cicer arietinum.

    abstract::Calcium plays a crucial role as a secondary messenger in all aspects of plant growth, development and survival. Calcium dependent protein kinases (CDPKs) are the major calcium decoders, which couple the changes in calcium level to an appropriate physiological response. The mechanism by which calcium regulates CDPK pro...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2015.03.005

    authors: Dixit AK,Jayabaskaran C

    更新日期:2015-05-01 00:00:00

  • Micropropagation of Dendrobium nobile from shoot tip sections.

    abstract::Successful shoot regeneration of Dendrobium nobile was achieved using thin shoot tip sections and triacontanol (TRIA) for the first time. Protocorm-like bodies (PLBs) or proliferating shoot buds were observed when thin shoot tip sections were cultured on the basal medium of Mitra et at. (Indian J. Exp. Biol. 14 (1976)...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2004.09.008

    authors: Malabadi RB,Mulgund GS,Kallappa N

    更新日期:2005-04-01 00:00:00

  • Developing embryos of Sesbania sesban have unique potential to photosynthesize under high osmotic environment.

    abstract::This study has been carried out to investigate the photosynthetic activities in developing embryos of Sesbania sesban under a highly osmotic environment. In S. sesban, the embryo turns green/chlorophyllous at the early heart shape stage. Interestingly, despite being deeply embedded within the supporting tissues (sever...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2004.03.002

    authors: Puthur JT,Saradhi PP

    更新日期:2004-10-01 00:00:00

  • Inhibition of stem elongation in spinach by theobroxide.

    abstract::In the current study, we investigated the influences of theobroxide on stem elongation in spinach (Spinacia oleracea). Our results showed that stem elongation and flower formation were inhibited by spraying spinach plants with theobroxide under inductive, long day conditions (16 h light/8 h dark), while application of...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2005.05.005

    authors: Kong F,Gao X,Nam KH,Takahashi K,Matsuura H,Yoshihara T

    更新日期:2006-03-01 00:00:00

  • Polyamine and tyramine involvement in NaCl-induced improvement of Cd resistance in the halophyte Inula chrithmoides L.

    abstract::The aim of the present work was to analyze the impact of salinity on the plant response to Cd toxicity in the Mediterranean halophyte species Inula crithmoides. For this purpose, cuttings were cultivated hydroponically during 21d in the presence of 0, 25 or 50μM CdCl2 combined or not with 0, 100, 200 and 400mM NaCl. T...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2017.05.018

    authors: Ghabriche R,Ghnaya T,Mnasri M,Zaier H,Baioui R,Vromman D,Abdelly C,Lutts S

    更新日期:2017-09-01 00:00:00

  • Unexpected localization of a lipid transfer protein in germinating sunflower seeds.

    abstract::Plant lipid transfer proteins (LTPs) are low-molecular-mass proteins whose biological function still remains elusive. They are synthesized with a signal peptide that drives them to the secretory pathway. We have previously described the occurrence of an apoplastic LTP named Ha-AP10, present in sunflower seeds. Using a...

    journal_title:Journal of plant physiology

    pub_type: 杂志文章

    doi:10.1016/j.jplph.2008.11.005

    authors: Pagnussat LA,Lombardo C,Regente M,Pinedo M,Martín M,de la Canal L

    更新日期:2009-05-15 00:00:00