Dynamical behaviour of biological regulatory networks--I. Biological role of feedback loops and practical use of the concept of the loop-characteristic state.

abstract：:In this paper, we use multiple scale homogenisation to derive a set of averaged macroscale equations that describe the movement of nutrients in partially saturated soil that contains growing potato tubers. The soil is modelled as a poroelastic material, which is deformed by the growth of the tubers, where the growth o...

journal_title：Bulletin of mathematical biology

authors： Duncan SJ,Daly KR,McKay Fletcher DM,Ruiz S,Sweeney P,Roose T

更新日期：2019-10-01 00:00:00

abstract：:A mathematical model is presented for the steps in the elongation process, and the steady-state elongation rate as a function of the amino acid concentrations is found. In addition, the reset sub-process of the elongation process is modeled. The rate of elongation of peptide chains is found to be a function of the con...

journal_title：Bulletin of mathematical biology

authors： Heyd A,Drew DA

更新日期：2003-11-01 00:00:00

abstract：:For epidemic models, it is shown that fatal infectious diseases cannot drive the host population into extinction if the incidence function is upper density-dependent. This finding holds even if a latency period is included and the time from infection to disease-induced death has an arbitrary length distribution. Howev...

journal_title：Bulletin of mathematical biology

authors： Farrell AP,Collins JP,Greer AL,Thieme HR

更新日期：2018-07-01 00:00:00

abstract：:Cardiac and neural systems share common features of intrinsic oscillation in some cells as well as the ability to propagate excitation. One theoretical approach to study such systems is to develop realistic models for the tissue. This involves first developing detailed ionic "Hodgkin-Huxley"-type models of individual ...

journal_title：Bulletin of mathematical biology

authors： Glass L,Shrier A

更新日期：2015-05-01 00:00:00

abstract：:We extend a spatially non-local cross-diffusion model of aggregation between multiple species with directed motion toward resource gradients to include many species and more general kinds of dispersal. We first consider diffusive instabilities, determining that for directed motion along fecundity gradients, the model ...

journal_title：Bulletin of mathematical biology

authors： Taylor NP,Kim H,Krause AL,Van Gorder RA

更新日期：2020-08-11 00:00:00

abstract：:A braced framework of tubular struts, in the walls and air spaces of frog lungs, suspends the respiratory surface and holds the lung open at zero transmural pressure withstanding imploding forces created by abdominal viscera, much as would the supports of a bell tent. The struts are tubes, having a larger second momen...

journal_title：Bulletin of mathematical biology

authors： Lawry J

更新日期：1999-07-01 00:00:00

abstract：:We exhibit a stochastic discrete time model that produces the Eigen model (Naturwissenschaften 58:465-523, 1971) in the deterministic and continuous time limits. The model is based on the competition among individuals differing in terms of fecundity but with the same viability. We explicitly write down the Markov matr...

journal_title：Bulletin of mathematical biology

authors： Musso F

更新日期：2011-01-01 00:00:00

abstract：:The propagation of fire-diffuse-fire Ca(2+) waves through a three-dimensional rectangular domain is considered. The domain is infinite in extent in the direction of propagation but with lateral barriers to diffusion which contain Ca(2+) pumps. The Ca(2+) concentration profile due to the firing of a release site (spark...

journal_title：Bulletin of mathematical biology

authors： Lemon G

更新日期：2004-01-01 00:00:00

abstract：:Temporal evolution of a clonal bacterial population is modelled taking into account reversible mutation and selection mechanisms. For the mutation model, an efficient algorithm is proposed to verify whether experimental data can be explained by this model. The selection-mutation model has unobservable fitness paramete...

journal_title：Bulletin of mathematical biology

authors： Bayliss CD,Fallaize C,Howitt R,Tretyakov MV

更新日期：2019-03-01 00:00:00

abstract：:Premised on relatively simple assumptions, mathematical models like those of Monod, Pirt or Droop inadequately explain the complex transient behavior of microbial populations. In particular, these models fail to explain many aspects of the dynamics of a Tetrahymena pyriformis-Escherichia coli community. In this study ...

journal_title：Bulletin of mathematical biology

authors： Jaworska JS,Hallam TG,Schultz TW

更新日期：1996-03-01 00:00:00

abstract：:The insertion-deletion model developed by Thorne, Kishino and Felsenstein (1991, J. Mol. Evol., 33, 114-124; the TKF91 model) provides a statistical framework of two sequences. The statistical alignment of a set of sequences related by a star tree is a generalization of this model. The known algorithm computes the pro...

journal_title：Bulletin of mathematical biology

authors： Miklós I

更新日期：2002-07-01 00:00:00

abstract：:Evolutionary game dynamics of two strategies in finite population is studied by continuous probabilistic approach. Besides frequency dependent selection, mutation was also included in this study. The equilibrium probability density functions of abundance, expected time to extinction or fixation were derived and their ...

journal_title：Bulletin of mathematical biology

authors： Gao M

更新日期：2009-07-01 00:00:00

abstract：:A semi-empirical model applicable to the flow of blood and other particulate suspensions through narrow tubes has been developed. It envisages a central core of blood surrounded by a wall layer of reduced hematocrit. With the help of this model the wall layer thickness and extent of plug flow may be calculated using p...

journal_title：Bulletin of mathematical biology

authors： Das RN,Seshadri V

更新日期：1975-10-01 00:00:00

abstract：:Marine birds and mammals move between various habitats during the day as they engage in behaviors related to resting, sleeping, preening, feeding, and breeding. The per capita rates of movement between these habitats, and hence the habitat occupancy dynamics, often are functions of environmental variables such as tide...

journal_title：Bulletin of mathematical biology

authors： Henson SM,Hayward JL,Damania SP

更新日期：2006-02-01 00:00:00

abstract：:Doxorubicin treatment outcomes for non-Hodgkin's lymphomas (NHL) are mathematically modelled and computationally analyzed. The NHL model includes a tumor structure incorporating mature and immature vessels, vascular structural adaptation and NHL cell-cycle kinetics in addition to Doxorubicin pharmacokinetics (PK) and ...

journal_title：Bulletin of mathematical biology

authors： Ribba B,Marron K,Agur Z,Alarcón T,Maini PK

更新日期：2005-01-01 00:00:00

abstract：:The lactose operon in Escherichia coli was the first known gene regulatory network, and it is frequently used as a prototype for new modeling paradigms. Historically, many of these modeling frameworks use differential equations. More recently, Stigler and Veliz-Cuba proposed a Boolean model that captures the bistabili...

journal_title：Bulletin of mathematical biology

authors： Jenkins A,Macauley M

更新日期：2017-08-01 00:00:00

abstract：:A dynamic model for cell differentiation, where cells with internal chemical reaction dynamics interact with each other and replicate was studied. It led to spontaneous differentiation of cells and determination, as discussed in the isologous diversification. The following features of the differentiation were obtained...

journal_title：Bulletin of mathematical biology

authors： Furusawa C,Kaneko K

更新日期：1998-07-01 00:00:00

abstract：:To obtain the correlation dimension and entropy from an experimental time series we derive estimators for these quantities together with expressions for their variances using a maximum likelihood approach. The validity of these expressions is supported by Monte Carlo simulations. We illustrate the use of the estimator...

journal_title：Bulletin of mathematical biology

authors： Olofsen E,Degoede J,Heijungs R

更新日期：1992-01-01 00:00:00

abstract：:Identifiability concerns finding which unknown parameters of a model can be estimated, uniquely or otherwise, from given input-output data. If some subset of the parameters of a model cannot be determined given input-output data, then we say the model is unidentifiable. In this work, we study linear compartment models...

journal_title：Bulletin of mathematical biology

authors： Meshkat N,Sullivant S,Eisenberg M

更新日期：2015-08-01 00:00:00

abstract：:Analytical methods for predicting and exploring the dynamics of stochastic, spatially interacting populations have proven to have useful application in epidemiology and ecology. An important development has been the increasing interest in spatially explicit models, which require more advanced analytical techniques tha...

journal_title：Bulletin of mathematical biology

authors： Filipe JA,Gibson GJ

更新日期：2001-07-01 00:00:00

abstract：:Two types of behavior have been previously reported in models of immune networks. The typical behavior of simple models, which involve B cells only, is stationary behavior involving several steady states. Finite amplitude perturbations may cause the model to switch between different equilibria. The typical behavior of...

journal_title：Bulletin of mathematical biology

authors： De Boer RJ,Perelson AS,Kevrekidis IG

更新日期：1993-01-01 00:00:00

abstract：:Dengue is a growing public health problem in tropical and subtropical cities. It is transmitted by mosquitoes, and the main strategy for epidemic prevention and control is insecticide fumigation. Effective management is, however, proving elusive. People's day-to-day movement about the city is believed to be an importa...

journal_title：Bulletin of mathematical biology

authors： Falcón-Lezama JA,Martínez-Vega RA,Kuri-Morales PA,Ramos-Castañeda J,Adams B

更新日期：2016-10-01 00:00:00

abstract：:In contrast to their name, biofilms are not always flat and homogeneous but instead often exhibit complex structural heterogeneity. It has been suggested that nonhomogeneous geometry is selected in order to increase biofilm growth rate. A previous study (Dockery and Klapper (2002) SIAM J. Appl. Math., 62, 853-869) of ...

journal_title：Bulletin of mathematical biology

authors： Klapper I

更新日期：2004-07-01 00:00:00

abstract：:Moment closure methods are widely used to analyze mathematical models. They are specifically geared toward derivation of approximations of moments of stochastic models, and of similar quantities in other models. The methods possess several weaknesses: Conditions for validity of the approximations are not known, magnit...

journal_title：Bulletin of mathematical biology

authors： Nåsell I

更新日期：2017-09-01 00:00:00

abstract：:The coordinated beating of motile cilia is responsible for ovum transport in the oviduct, transport of mucus in the respiratory tract, and is the basis of motility in many single-celled organisms. The beating of a single motile cilium is achieved by the ATP-driven activation cycles of thousands of dynein molecular mot...

journal_title：Bulletin of mathematical biology

authors： Yang X,Dillon RH,Fauci LJ

更新日期：2008-05-01 00:00:00

abstract：:Here, we consider a game-theoretic model of multilevel selection in which individuals compete based on their payoff and groups also compete based on the average payoff of group members. Our focus is on multilevel social dilemmas: games in which individuals are best off cheating, while groups of individuals do best whe...

journal_title：Bulletin of mathematical biology

authors： Cooney DB

更新日期：2020-05-30 00:00:00

abstract：:Using optimal control theory as the basic theoretical tool, we investigate the efficacy of different antibiotic treatment protocols in the most exacting of circumstances, described as follows. Viewing a continuous culture device as a proxy for a much more complex host organism, we first inoculate the device with a sin...

journal_title：Bulletin of mathematical biology

authors： Peña-Miller R,Lähnemann D,Schulenburg H,Ackermann M,Beardmore R

更新日期：2012-04-01 00:00:00

abstract：:Measures of sexual dimorphism have been used extensively to predict the social organization and ecology of animal and human populations. There is, however, no universally accepted measure of phenotypic differences between the sexes. Most indices of sexual dimorphism fail to incorporate all of the information contained...

journal_title：Bulletin of mathematical biology

authors： Ipiña SL,Durand AI

更新日期：2000-09-01 00:00:00

abstract：:We investigate the existence of oscillatory dynamics and multiple steady-state flow rates in a network with a simple topology and in vivo microvascular blood flow constitutive laws. Unlike many previous analytic studies, we employ the most biologically relevant models of the physical properties of whole blood. Through...

journal_title：Bulletin of mathematical biology

authors： Karst NJ,Storey BD,Geddes JB

更新日期：2015-07-01 00:00:00

abstract：:Cholera is an acute gastro-intestinal infection that affects millions of people throughout the world each year, primarily but not exclusively in developing countries. Because of its public health ramifications, considerable mathematical attention has been paid to the disease. Here we consider one neglected aspect of c...

journal_title：Bulletin of mathematical biology

authors： Kobe J,Pritchard N,Short Z,Erovenko IV,Rychtář J,Rowell JT

更新日期：2018-10-01 00:00:00