Differentiation of cancer cells in two-dimensional and three-dimensional breast cancer models by Raman spectroscopy.

Abstract:

:We demonstrate the first application of Raman spectroscopy in diagnosing nonmalignant, premalignant, malignant, and metastatic stages of breast cancer in a three-dimensional (3-D) cell culture model that closely mimics an in vivo environment. Comprehensive study comparing classification in two-dimensional (2-D) and 3-D cell models was performed using statistical methods composed of principal component analysis for exploratory analysis and outlier removal, partial least squares discriminant analysis, and elastic net regularized regression for classification. Our results show that Raman spectroscopy with an appropriate classification tool has excellent resolution to discriminate the four stages of breast cancer progression, with a near 100% accuracy for both 2-D and 3-D cell models. The diversity in chemical groups related to nucleic acids, proteins, and lipids, among other chemicals, were identified by appropriate peaks in the Raman spectra that correspond to the correct classification of the different stages of tumorigenesis model comprising of MCF10A, MCF10AneoT, MCF10CA1h, and MCF10CA1a cell lines. An explicit relationship between wavenumber and the stages of cancer progression was identified by the elastic net variable selection.

journal_name

J Biomed Opt

authors

Damayanti NP,Fang Y,Parikh MR,Craig AP,Kirshner J,Irudayaraj J

doi

10.1117/1.JBO.18.11.117008

subject

Has Abstract

pub_date

2013-11-01 00:00:00

pages

117008

issue

11

eissn

1083-3668

issn

1560-2281

pii

1782132

journal_volume

18

pub_type

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