Australian monocot-infecting mastrevirus diversity rivals that in Africa.

Abstract:

:Monocotyledonous plant infecting mastreviruses (family Geminiviridae) have been found in the Old World. The greatest diversity of these viruses has been found in Africa but this may simply reflect the more extensive sampling that has been done there. To provide a better understanding of mastrevirus diversity in Australia, we have sequenced the genomes of 41 virus isolates found in naturalised and native grasses and identified four new species in addition to the four previously characterised species. Two of these species, which were recovered from a single Sporobolus plant, are highly divergent and are most closely related to the African streak viruses. This, coupled with the discovery of divergent dicotyledonous plant infecting mastreviruses in Australia brings into question the hypothesis that mastreviruses may have originated in Africa. We found that the patterns of inter- and intra-species recombination and the recombination hotspots mirror those found in both their African monocot-infecting counterparts and dicot-infecting mastrevirus.

journal_name

Virus Res

journal_title

Virus research

authors

Kraberger S,Thomas JE,Geering AD,Dayaram A,Stainton D,Hadfield J,Walters M,Parmenter KS,van Brunschot S,Collings DA,Martin DP,Varsani A

doi

10.1016/j.virusres.2012.07.018

subject

Has Abstract

pub_date

2012-10-01 00:00:00

pages

127-36

issue

1

eissn

0168-1702

issn

1872-7492

pii

S0168-1702(12)00284-5

journal_volume

169

pub_type

杂志文章
  • Purification and in vitro-phospholabeling of secretory envelope proteins E1 and E2 of hepatitis C virus expressed in insect cells.

    abstract::The putative envelope glycoproteins of hepatitis C virus (HCV), E1 and E2, were expressed as recombinant, secretory proteins in Sf9 insect cells through infection with recombinant baculoviruses. The influenza virus hemagglutinin signal sequence (HASS) was inserted upstream of the HCV-cDNAs in order to effect secretion...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(96)01365-2

    authors: Hüssy P,Schmid G,Mous J,Jacobsen H

    更新日期:1996-11-01 00:00:00

  • In vitro and in vivo activity of AS101 against West Nile virus (WNV).

    abstract::There are currently no effective drugs to treat serious complications caused by WNV infection. The inhibition of WNV by the pluripotent immunomodulator AS101 [ammonium trichloro(dioxyethylene-0-0')tellurate] was evaluated in vitro and in vivo, and its mechanism was explored. Adding AS101 to Vero cells 1h or 5 min befo...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2012.03.004

    authors: Indenbaum V,Bin H,Makarovsky D,Weil M,Shulman LM,Albeck M,Sredni B,Mendelson E

    更新日期:2012-06-01 00:00:00

  • Comparison of replication competence of wild-type and lamivudine-resistant hepatitis B virus isolates from a chronic hepatitis B patient.

    abstract::In lamivudine-refractory chronic hepatitis B (CHB) patients, discontinuation of lamivudine therapy may lead to loss of lamivudine-resistant hepatitis B virus (HBV) and reappearance of wide-type HBV as dominant strains, yet the underlying mechanism remains unclear. In this study, we cloned wide-type and lamivudine-resi...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2018.07.021

    authors: Zhang Q,Chen J,Pan M,Liu J,Liu T,Zhou YH

    更新日期:2018-08-15 00:00:00

  • Giant viruses as protein-coated amoeban mitochondria?

    abstract::Mimivirus' genome includes parts of 5S, 16S and 23S ribosomal RNAs encoded by Acanthamoeba's mitogenome, the giant virus' host. Two non-exclusive hypotheses for rRNA remnants in giant viruses are examined: 1. mitogenomes invade viral genomes as they do for nuclear chromosomes (producing numts); 2. megaviral genomes ev...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2018.06.004

    authors: Seligmann H

    更新日期:2018-07-15 00:00:00

  • The avian and mammalian host range of highly pathogenic avian H5N1 influenza.

    abstract::Highly pathogenic H5N1 influenza viruses have been isolated from a number of avian and mammalian species. Despite intensive control measures the number of human and animal cases continues to increase. A more complete understanding of susceptible species and of contributing environmental and molecular factors is crucia...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2013.09.004

    authors: Kaplan BS,Webby RJ

    更新日期:2013-12-05 00:00:00

  • Identification of the interaction domains of white spot syndrome virus envelope proteins VP28 and VP24.

    abstract::VP28 and VP24 are two major envelope proteins of white spot syndrome virus (WSSV). The direct interaction between VP28 and VP24 has been described in previous studies. In this study, we confirmed this interaction and mapped the interaction domains of VP28 and VP24 by constructing a series of deletion mutants. By co-im...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2015.01.017

    authors: Li Z,Chen W,Xu L,Li F,Yang F

    更新日期:2015-03-16 00:00:00

  • The genetic organization and transcriptional analysis of the short unique region in the genome of nononcogenic Marek's disease virus serotype 2.

    abstract::Studies on the Marek's disease virus (MDV) serotype 2 (MDV2) genome may be important for understanding the naturally nononcogenic nature of the virus. To determine the complete DNA sequence of MDV2 unique short (Us) region, genomic BamHI fragments F, M1 and R were sequenced. The MDV2 Us region is 12109 bp long and con...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/s0168-1702(98)00110-5

    authors: Jang HK,Ono M,Kim TJ,Izumiya Y,Damiani AM,Matsumura T,Niikura M,Kai C,Mikami T

    更新日期:1998-11-01 00:00:00

  • Analysis and solution of false-positives when testing CVA16 sera using an antibody assay against the EV71 virus.

    abstract::Hand, foot and mouth disease (HFMD) in humans is caused mainly by Enterovirus 71(EV71) and Coxsackievirus A16 (CVA16). EV71 is associated with severe HFMD cases but not CVA16. Use of IgM-capture enzyme-linked immunosorbent assay (ELISA) is important for the early diagnosis of EV71 infection, but cross-reactivity of th...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2013.04.015

    authors: Wang C,You A,Tian X,Zhao M,Chen Y,Lin T,Zheng J,Xiao M,Zhang Y,Kuang L,Zhou Z,Zhu B

    更新日期:2013-09-01 00:00:00

  • Induction of insert-specific immune response in mice by hamster polyomavirus VP1 derived virus-like particles carrying LCMV GP33 CTL epitope.

    abstract::Hamster polyomavirus (HaPyV) major capsid protein VP1 based chimeric virus-like particles (VLPs) carrying model GP33 CTL epitope derived from Lymphocytic choriomeningitis virus (LCMV) were generated in yeast and examined for their capability to induce CTL response in mice. Chimeric VP1-GP33 VLPs were effectively proce...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2011.08.003

    authors: Mazeike E,Gedvilaite A,Blohm U

    更新日期:2012-01-01 00:00:00

  • Development of fetal and placental innate immune responses during establishment of persistent infection with bovine viral diarrhea virus.

    abstract::Transplacental viral infections are dependent upon complex interactions between feto-placental and maternal immune responses and the stage of fetal development at which the infection occurs. Bovine viral diarrhea virus (BVDV) has the ability to cross the placenta and infect the fetus. Infection early in gestation with...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2012.05.018

    authors: Smirnova NP,Webb BT,Bielefeldt-Ohmann H,Van Campen H,Antoniazzi AQ,Morarie SE,Hansen TR

    更新日期:2012-08-01 00:00:00

  • Cucurbit chlorotic yellows virus p22 suppressor of RNA silencing binds single-, double-stranded long and short interfering RNA molecules in vitro.

    abstract::Cucurbit chlorotic yellows virus (CCYV) is a new member of the genus Crinivirus (family Closteroviridae) with a bi-partite genome. CCYV RNA 1-encoded p22 has recently been reported to be a weak local suppressor of RNA silencing for which an interaction with cucumber SKP1LB1 through an F-box-like motif was demonstrated...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2020.197887

    authors: Salavert F,Navarro JA,Owen CA,Khechmar S,Pallás V,Livieratos IC

    更新日期:2020-04-02 00:00:00

  • Detection of spring viremia of carp virus isolates by hybridization with non-radioactive probes and amplification by polymerase chain reaction.

    abstract::For detection of spring viremia of carp virus (SVCV) DNA probes have been constructed using the reverse transcription-polymerase chain reaction (RT-PCR) amplification technique and cDNA cloning in plasmid and phage vectors. The specific primers for amplification of SVCV M and G genes were chosen and synthesized. Studi...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/s0168-1702(99)00052-0

    authors: Oreshkova SF,Shchelkunov IS,Tikunova NV,Shchelkunova TI,Puzyrev AT,Ilyichev AA

    更新日期:1999-09-01 00:00:00

  • In vitro characterization of felid herpesvirus 1 (FHV-1) mutants generated by recombineering in a recombinant BAC vector.

    abstract::Felid herpesvirus 1 (FHV-1) mutants were constructed using two-step Red-mediated recombination techniques based on a virulent full-length FHV-1 BAC clone. The individual mutant viruses generated were deficient in glycoprotein C (gC), glycoprotein E (gE), US3 serine/threonine protein kinase (PK), or both gE and thymidi...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2016.05.001

    authors: Tai SH,Holz C,Engstrom MD,Cheng HH,Maes RK

    更新日期:2016-08-02 00:00:00

  • Kupffer and endothelial liver cell damage renders A/J mice susceptible to mouse hepatitis virus type 3.

    abstract::Damage to the Kupffer and endothelial cells of the liver sinusoids induced by the administration of sublethal doses of frog virus 3 (FV 3) renders A/J mice which are genetically resistant to mouse hepatitis virus type 3 (MHV 3) highly susceptible to this virus. Liver histopathology of these animals revealed typical ne...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(84)90013-3

    authors: Pereira CA,Steffan AM,Kirn A

    更新日期:1984-10-01 00:00:00

  • Mapping target site selection for the non-specific nuclease activities of retroviral integrase.

    abstract::To identify the parts of retroviral integrase that interact with its DNA substrates, we compared the patterns of target site usage by chimeric enzymes and protein fragments in assays that reveal integrase's non-specific nuclease activities. The central region of 12 chimeric proteins between the human immunodeficiency ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/s0168-1702(99)00126-4

    authors: Katzman M,Sudol M,Pufnock JS,Zeto S,Skinner LM

    更新日期:2000-01-01 00:00:00

  • Clathrin- and serine proteases-dependent uptake of porcine epidemic diarrhea virus into Vero cells.

    abstract::Porcine epidemic diarrhea virus (PEDV), a member of the genus Alphacoronavirus, is a causative agent of porcine enteric disease characterized by acute watery diarrhea and dehydration in sucking piglet. Similar to other coronaviruses, PEDV spike protein mediates its cell entry by binding to cellular receptors and induc...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2014.07.022

    authors: Park JE,Cruz DJ,Shin HJ

    更新日期:2014-10-13 00:00:00

  • Genetic evolution and epidemiological analysis of Seneca Valley virus (SVV) in China.

    abstract::Seneca Valley virus (SVV) is a novel Picornaviridae that is closely associated with porcine idiopathic vesicular disease (PIVD). Here, a novel SVV strain (CH-GX-01-2019) was detected and isolated from swine in Guangxi Province, China. The complete genomic sequence of CH-GX-01-2019 exhibited 93.3-98.9 % identify with o...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2020.198177

    authors: Zhang J,Zhang H,Sun W,Jiao C,Xiao P,Han J,Nan F,Xie C,Ha Z,Li Z,Xie Y,Meng Y,Lu H,Jin N

    更新日期:2021-01-02 00:00:00

  • CD4 binding loop responsible for the neutralization of human monoclonal neutralizing antibody Y498.

    abstract::Broad and potent human monoclonal neutralizing antibodies have considerable potential in the prevention and treatment of acquired immunodeficiency syndrome (AIDS). To identify the key amino acid recognition site contacted with neutralizing antibody Y498, peptides were panned from the PhD-12 peptide library and predict...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2020.198001

    authors: Cao W,Li B,Liu H,Cheng X,Liu Y,Zhao X,Qiao Y

    更新日期:2020-08-01 00:00:00

  • Infectious salmon anaemia virus nuclear export protein is encoded by a spliced gene product of genomic segment 7.

    abstract::Infectious salmon anaemia virus (ISAV) is an orthomyxovirus causing anaemia and circulatory disease with high mortality in farmed Atlantic salmon (Salmo salar). Orthomyxoviruses are unusual as RNA viruses as they replicate in the nucleus and some viral transcripts undergo splicing. The nuclear replication necessitates...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2013.07.001

    authors: Ramly RB,Olsen CM,Braaen S,Rimstad E

    更新日期:2013-10-01 00:00:00

  • Genetic and antigenic characterization of the Amur virus associated with hemorrhagic fever with renal syndrome.

    abstract::The genetic and antigenic characteristics of the Amur (AMR) and Far East (FE) virus lineages, which are both within the genus Hantavirus, were studied. Representative viruses, H5 and B78 for AMR and Bao 14 for FE, were used. The entire small (S) and medium (M) segments, except for the 3'- and 5'-ends, were sequenced. ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2003.12.031

    authors: Lokugamage K,Kariwa H,Lokugamage N,Miyamoto H,Iwasa M,Hagiya T,Araki K,Tachi A,Mizutani T,Yoshimatsu K,Arikawa J,Takashima I

    更新日期:2004-05-01 00:00:00

  • Analysis of antibody response to the measles virus using synthetic peptides of the fusion protein. Evidence of non-random pairing of T and B cell epitopes.

    abstract::The measles virus induces a life-long immune response associated with antibodies specific for the fusion protein. To map the linear immunodominant recognition sites of the fusion (F) protein of the measles virus, we have reacted a complete set of 108 overlapping pentadecapeptides with purified IgG obtained from donor ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(93)90095-5

    authors: Muller CP,Handtmann D,Brons NH,Weinmann M,Wiesmüller KH,Spahn G,Wiesneth M,Schneider F,Jung G

    更新日期:1993-12-01 00:00:00

  • Beta-defensin 2 enhances immunogenicity and protection of an adenovirus-based H5N1 influenza vaccine at an early time.

    abstract::Reports of human infections with highly pathogenic H5N1 avian influenza viruses in many countries in Asia and Africa with varying case fatality rates highlight the pandemic potential of these viruses. In order to contain a rapidly spreading influenza virus in a pandemic scenario, a vaccine which can induce rapid and r...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2013.09.013

    authors: Vemula SV,Amen O,Katz JM,Donis R,Sambhara S,Mittal SK

    更新日期:2013-12-26 00:00:00

  • Differential susceptibility of resting CD4(+) T lymphocytes to a T-tropic and a macrophage (M)-tropic human immunodeficiency virus type 1 is associated with their surface expression of CD38 molecules.

    abstract::Recent evidence has accumulated which definitively shows that chemokine receptors CCR5 and CXCR4 play an essential role as coreceptors for human immunodeficiency virus type 1 (HIV-1) infection. Flow cytometric analysis permitted us to detect CD38, a surface marker of early differentiation, as well as activation of T c...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/s0168-1702(00)00220-3

    authors: Horikoshi H,Kinomoto M,Sasao F,Mukai T,Luftig RB,Ikuta K

    更新日期:2001-01-01 00:00:00

  • Complete genomes of Aravan, Khujand, Irkut and West Caucasian bat viruses, with special attention to the polymerase gene and non-coding regions.

    abstract::The purpose of this study was to generate complete genome sequences of Aravan (ARAV), Khujand (KHUV), Irkut (IRKV) and West Caucasian bat (WCBV) viruses, and to compare them with genomes of other lyssaviruses. We focused on RNA-dependent RNA-polymerase (L) and non-coding regions, because other genes of these viruses h...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2008.04.021

    authors: Kuzmin IV,Wu X,Tordo N,Rupprecht CE

    更新日期:2008-09-01 00:00:00

  • Detection of RNA in purified cytomegalovirus virions.

    abstract::Five viral RNA transcripts have recently been detected in purified virions of human cytomegalovirus (HCMV) strain AD169, a well-characterized member of the family Herpesviridae [Science 288 (2000) 2373]. While the function of these transcripts and/or the proteins they encode remains to be elucidated, it is not known w...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2004.03.008

    authors: Sarcinella E,Brown M,Tellier R,Petric M,Mazzulli T

    更新日期:2004-09-01 00:00:00

  • African swine fever virus-induced polypeptides in Vero cells.

    abstract::African swine fever virus induces in Vero cells 81 acid and 14 basic polypeptides which account for most of the information content of the virus DNA. The kinetics and the cytosine arabinoside sensitivity of the synthesis of the virus-induced polypeptides showed the existence of three classes of proteins, two early and...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(86)90031-6

    authors: Santarén JF,Viñuela E

    更新日期:1986-09-01 00:00:00

  • Construction of a recombinant vaccinia virus expressing the Lassa virus glycoprotein gene and protection of guinea pigs from a lethal Lassa virus infection.

    abstract::A cloned cDNA (1.65 kb) containing the complete glycoprotein gene of the Josiah strain of Lassa virus was inserted into the thymidine kinase (TK) gene of the New York Board of Health (WYETH) strain of vaccinia virus. The Lassa virus glycoprotein precursor, GPC, and the posttranslational cleavage products, G1 and G2, w...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(88)90033-0

    authors: Auperin DD,Esposito JJ,Lange JV,Bauer SP,Knight J,Sasso DR,McCormick JB

    更新日期:1988-02-01 00:00:00

  • Mutations in the coat protein-binding cis-acting RNA motifs debilitate RNA recombination of Brome mosaic virus.

    abstract::We have previously described the efficient homologous recombination system between 5' subgenomic RNA3a (sgRNA3a) and genomic RNA3 of Brome mosaic virus (BMV) in barley protoplasts (Sztuba-Solińska et al., 2011a). Here, we demonstrated that sequence alterations in the coat protein (CP)-binding cis-acting RNA motifs, th...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2012.10.001

    authors: Sztuba-Solińska J,Fanning SW,Horn JR,Bujarski JJ

    更新日期:2012-12-01 00:00:00

  • Lysine-71 in the large delta antigen of hepatitis delta virus clade 3 modulates its localization and secretion.

    abstract::Hepatitis delta virus (HDV) is an RNA virus and eight clades of HDV have been identified. HDV clade 3 (HDV-3) is isolated only in the northern area of South America. The outcome of HDV-3 infection is associated with severe fulminant hepatitis. Variations in the large delta antigen (LDAg) between HDV clade 1 (HDV-1) an...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2012.08.021

    authors: Huang CR,Wang RY,Hsu SC,Lo SJ

    更新日期:2012-12-01 00:00:00

  • DNA-binding proteins of baculovirus-infected cells during permissive and semipermissive replication.

    abstract::Certain insect cell lines have been shown to be permissive (TN-368) or semipermissive (IPLB-LD-652Y) for Autographa californica nuclear polyhedrosis virus (AcMNPV) replication (McClintock et al., 1986b). In this report DNA-binding proteins were identified in such cell:virus systems by hybridizing Western blots contain...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(91)90105-5

    authors: McClintock JT,Guzo D,Guthrie KP,Dougherty EM

    更新日期:1991-07-01 00:00:00