Characterization of UDP-glucose 4-epimerase from Pyrococcus horikoshii: regeneration of UDP to produce UDP-galactose using two-enzyme system with trehalose.

Abstract:

:A gene encoding a putative UDP-glucose 4-epimerase (pGALE) in Pyrococcus horikoshii was cloned and expressed in Escherichia coli. The purified enzyme could reversibly catalyze both the synthesis of UDP-Gal and UDP-Glc but preferred the binding of UDP-Gal by approximately 10-fold. The optimum pH and temperature were 6.5 and 65°C. The enzyme acted effectively without the addition of nicotinamide adenine dinucleotide (NAD(+)), possibly due to the presence of tightly bound NAD(+). In particular, pGALE could be coupled with trehalose synthase (TreT) from P. horikoshii to regenerate UDP-Gal from UDP. The possible byproduct of glycosyltransferase, UDP, was capable of being converted to UDP-Glc with trehalose by TreT, and UDP-Glc was simultaneously converted to UDP-Gal by pGALE. Conclusively, the results suggest that pGALE and TreT with trehalose is an effective one-pot two-enzyme system for the regeneration of UDP-Gal, a high-cost substrate of galactosyltransferase, to complete a sugar nucleotide cycle.

journal_name

Bioresour Technol

journal_title

Bioresource technology

authors

Chung SK,Ryu SI,Lee SB

doi

10.1016/j.biortech.2012.01.046

subject

Has Abstract

pub_date

2012-04-01 00:00:00

pages

423-9

eissn

0960-8524

issn

1873-2976

pii

S0960-8524(12)00052-1

journal_volume

110

pub_type

杂志文章
  • Catalytic supercritical water gasification of primary paper sludge using a homogeneous and heterogeneous catalyst: Experimental vs thermodynamic equilibrium results.

    abstract::H2, CH4, CO and CO2 yields were measured during supercritical water gasification (SCWG) of primary paper waste sludge (PWS) at 450°C. Comparing these yields with calculated thermodynamic equilibrium values offer an improved understanding of conditions required to produce near-equilibrium yields. Experiments were condu...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2015.11.043

    authors: Louw J,Schwarz CE,Burger AJ

    更新日期:2016-02-01 00:00:00

  • Co-digestion of harvested microalgae and primary sludge in a mesophilic anaerobic membrane bioreactor (AnMBR): Methane potential and microbial diversity.

    abstract::Anaerobic co-digestion of primary sludge and raw microalgae (Scenedesmus and Chlorella) was performed in a lab-scale semi-continuous anaerobic membrane bioreactor to assess the biological performance and identify the microbial community involved in the co-digestion process. The reactor was operated at 35 °C for 440 da...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2019.122521

    authors: Serna-García R,Zamorano-López N,Seco A,Bouzas A

    更新日期:2020-02-01 00:00:00

  • Kinetic study of oxytetracycline and chlortetracycline inhibition in the anaerobic digestion of dairy manure.

    abstract::This study was aimed to investigate the mechanisms of oxytetracycline (OTC) and chlortetracycline (CTC) inhibition in anaerobic digestion (AD) using four kinetic models. The results showed that the inhibition rate of OTC was faster than CTC at OTC and CTC between 0.04 and 1.28 g/L. Hydrolysis rate constant was linearl...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2020.123810

    authors: Andriamanohiarisoamanana FJ,Ihara I,Yoshida G,Umetsu K

    更新日期:2020-11-01 00:00:00

  • A novel integration system of magnetically immobilized cells and a pair of graphite plate-stainless iron mesh electrodes for the bioremediation of coking wastewater.

    abstract::Magnetically immobilized cells of Comamonas sp. JB coupling with electrode reaction was developed to enhance the treatment efficiency of coking wastewater containing phenol, carbazole (CA), dibenzofuran (DBF), and dibenzothiophene (DBT). The pair of graphite plate-stainless iron mesh electrodes was chosen as the most ...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2016.06.009

    authors: Jiang B,Tan L,Ning S,Shi S

    更新日期:2016-09-01 00:00:00

  • Stabilisation of sewage sludge and vinasse bio-wastes by vermicomposting with rabbit manure using Eisenia fetida.

    abstract::Changes in the chemical characteristics and biological parameters of Eisenia fetida were assessed by VER using (CO+VE) rabbit manure (Vo) spiked with sewage sludge (SS) or vinasse (V). Seven mixtures were used: Vo, control; Vo+SS at 10%, 30%, and 50% (SS1, SS2, and SS3); Vo+V at 10%, 30%, and 50% (V1, V2, and V3). SS ...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2013.03.029

    authors: Molina MJ,Soriano MD,Ingelmo F,Llinares J

    更新日期:2013-06-01 00:00:00

  • Fungi diversity from different depths and times in chicken manure waste static aerobic composting.

    abstract::The Dirichlet multinomial mixtures mode was used to analyse illumina sequencing data to reveal both temporal and spatial variations of the fungi community present in the aerobic composting. Results showed that 670 operational taxonomic units (OTUs) were detected, and the dominant phylum was Ascomycota. There were four...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2017.04.047

    authors: Gu W,Lu Y,Tan Z,Xu P,Xie K,Li X,Sun L

    更新日期:2017-09-01 00:00:00

  • Process design and economic assessment of butanol production from lignocellulosic biomass via chemical looping gasification.

    abstract::Biomass chemical looping gasification (BCLG) is a promising gasification technology to convert biomass into synthesis gas with no need for molecular oxygen. In this study, a novel process for butanol production from lignocellulosic biomass based on BCLG is proposed. The proposed process is simulated using Aspen Plus a...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2020.123906

    authors: Li G,Chang Y,Chen L,Liu F,Ma S,Wang F,Zhang Y

    更新日期:2020-11-01 00:00:00

  • Effect of antibiotics on growth and laccase production from Cyathus bulleri and Pycnoporus cinnabarinus.

    abstract::The effect of nine different antibiotics (chloramphenicol, ampicillin trihydrate, kanamycin A monosulfate, neomycin sulfate, erythromycin, thiostrepton, tetracycline, apramycin sulfate and streptomycin sulfate) on growth and laccase production from Cyathus bulleri and Pycnoporus cinnabarinus has been investigated. All...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2004.11.014

    authors: Dhawan S,Lal R,Hanspal M,Kuhad RC

    更新日期:2005-08-01 00:00:00

  • Aerobic denitrifying bacterial communities drive nitrate removal: Performance, metabolic activity, dynamics and interactions of core species.

    abstract::Three novel mix-cultured aerobic denitrifying bacteria (Mix-CADB) consortia named D14, X21, and CL exhibited excellent total organic carbon (TOC) removal and aerobic denitrification capacities. The TOC and nitrate removal efficiencies were higher than 93.00% and 98.00%. The results of Biolog demonstrated that three co...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2020.123922

    authors: Li S,Zhang H,Huang T,Ma B,Miao Y,Shi Y,Xu L,Liu K,Huang X

    更新日期:2020-11-01 00:00:00

  • The direct electrocatalysis of phenazine-1-carboxylic acid excreted by Pseudomonas alcaliphila under alkaline condition in microbial fuel cells.

    abstract::In this paper, we reported a kind of exoelectrogens, Pseudomonas alcaliphila (P. alcaliphila) strain MBR, which could excrete phenazine-1-carboxylic acid (PCA) to transfer electron under alkaline condition in microbial fuel cells (MFCs). The electrochemical activity of strain MBR and the extracellular electron transfe...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2011.04.093

    authors: Zhang T,Zhang L,Su W,Gao P,Li D,He X,Zhang Y

    更新日期:2011-07-01 00:00:00

  • Performance of a laboratory-scale membrane bioreactor consisting mixed liquor with aquatic worms under toxic conditions.

    abstract::A laboratory scale membrane bioreactor (MBR) consisting of worms was operated for 214days. The objective was to evaluate the treatment and operating performance of the MBR with and without the addition of Ametryn which is a toxic and persistent herbicide. Removal of Ametryn was doubled (up to 80%) in the MBR when the ...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2013.12.061

    authors: Navaratna D,Shu L,Jegatheesan V

    更新日期:2014-03-01 00:00:00

  • Oxygen-containing functional groups on bioelectrode surface enhance expression of c-type cytochromes in biofilm and boost extracellular electron transfer.

    abstract::Introducing oxygen-containing functional groups is a common and convenient method to increase the hydrophilicity of bioelectrodes. In this study, the effect of oxygen-containing functional groups on biofilm was systematically studied to understand how the electron transfer between electrochemically active bacteria (EA...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2019.121995

    authors: Li H,Wang B,Deng S,Dai J,Shao S

    更新日期:2019-11-01 00:00:00

  • Bioleaching of a low-grade nickel-copper sulfide by mixture of four thermophiles.

    abstract::This study investigated thermophilic bioleaching of a low grade nickel-copper sulfide using mixture of four acidophilic thermophiles. Effects of 0.2g/L l-cysteine on the bioleaching process were further evaluated. It aimed at offering new alternatives for enhancing metal recoveries from nickel-copper sulfide. Results ...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2013.12.018

    authors: Li S,Zhong H,Hu Y,Zhao J,He Z,Gu G

    更新日期:2014-02-01 00:00:00

  • LLE experimental data, thermodynamic modeling and sensitivity analysis in the ethyl biodiesel from macauba pulp oil settling step.

    abstract::The aim of this study was to obtain experimental data related to liquid–liquid equilibrium (LLE) of systems containing glycerol + ethanol + ethyl biodiesel from macauba pulp oil, perform thermodynamic modeling and simulate the settling step of this biodiesel using simulation software. Binary interaction parameters wer...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2012.12.190

    authors: Basso RC,da Silva CA,Sousa Cde O,Meirelles AJ,Batista EA

    更新日期:2013-03-01 00:00:00

  • Effects of hydrothermal pre-treatments on Giant reed (Arundo donax) methane yield.

    abstract::Twelve hydrothermal pre-treatment combinations of temperature (150 and 180 °C), time (10 and 20 min) and acid catalyst (no catalyst; H2SO4 at 2% w/w immediately before steam cooking or in 24-h pre-soaking) were tested to assess their effects on methane yield of Giant reed biomass vs. untreated control. A batch anaerob...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2013.08.006

    authors: Di Girolamo G,Grigatti M,Barbanti L,Angelidaki I

    更新日期:2013-11-01 00:00:00

  • Bioproduction, statistical optimization and characterization of microbial plastic (poly 3-hydroxy butyrate) employing various hydrolysates of water hyacinth (Eichhornia crassipes) as sole carbon source.

    abstract::Saccharified water hyacinth hydrolysates (acid and enzyme hydrolysate) were used for the efficient production of poly (3-hydroxybutyrate) (PHB) via the Cupriavidus necator bacteria. The bacterium significantly utilizes the enzymatic hydrolyzate which gave the maximum PHB concentration (4.3 ± 0.4 g L(-1)), this was gre...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2012.06.107

    authors: Radhika D,Murugesan AG

    更新日期:2012-10-01 00:00:00

  • Heavy metal removal and crude bio-oil upgrading from Sedum plumbizincicola harvest using hydrothermal upgrading process.

    abstract::The main aim of this study was to separate heavy metals and yield crude bio-oil from a heavy metals hyperaccumulator harvest, Sedum plumbizincicola, through hydrothermal upgrading process. Parameters such as granularity, temperature, pressure, and duration were examined for their effect on the removal efficiency of he...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:

    authors: Yang JG

    更新日期:2010-10-01 00:00:00

  • A continuous process for biodiesel production in a fixed bed reactor packed with cation-exchange resin as heterogeneous catalyst.

    abstract::Continuous esterification of free fatty acids (FFA) from acidified oil with methanol was carried out with NKC-9 cation-exchange resin in a fixed bed reactor with an internal diameter of 25 mm and a height of 450 mm to produce biodiesel. The results showed that the FFA conversion increased with increases in methanol/oi...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2010.10.115

    authors: Feng Y,Zhang A,Li J,He B

    更新日期:2011-02-01 00:00:00

  • Potentials of using mixed culture bacteria incorporated with sodium bicarbonate for hydrogen production from water hyacinth.

    abstract::The aim of this study is to assess the potentials of using mixed culture bacteria incorporated with different concentrations of NaHCO3 for hydrogen production from water hyacinth (WH). The lowest hydrogen yield (HY) of 30.4 ± 1.9 mL/gTVS, H2 content (HC) of 19.5 ± 1.5% and hydrogenase enzyme (HE) activity of 0.06 ± 0....

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2018.05.021

    authors: Wazeri A,Elsamadony M,Roux SL,Peu P,Tawfik A

    更新日期:2018-09-01 00:00:00

  • A novel lignin degradation bacterial consortium for efficient pulping.

    abstract::A lignin degradation bacterial consortium named LDC was screened from the sludge of a reeds pond by a restricted subculture. It could break down 60.9% lignin in reeds at 30°C under conditions of static culture within 15 days. In order to analyze the diversity of LDC, plate isolation, 16S rDNA clone library and ARDRA (...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2013.04.033

    authors: Wang Y,Liu Q,Yan L,Gao Y,Wang Y,Wang W

    更新日期:2013-07-01 00:00:00

  • Proteomic changes in response to chromium(VI) toxicity in Pseudomonas aeruginosa.

    abstract::A proteomic approach was used to identify proteins involved in Cr(VI) stress response of Pseudomonas aeruginosa to toxic Cr(VI). Cytosolic and membrane fractions from bacteria exposed to 300 mg l(-1) Cr(VI) were prepared, 2D gel electrophoresis in combination with MALDI-TOF MS and LC-MS/MS was used to identify protein...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2009.11.008

    authors: Kiliç NK,Stensballe A,Otzen DE,Dönmez G

    更新日期:2010-04-01 00:00:00

  • Impact of bleaching on subcritical water- and Formosolv-pretreated tulip tree to enhance enzyme accessibility.

    abstract::A novel method was developed for fractionating cellulose microfibrils from forest residue (tulip tree sawdust) to enhance cellulose digestibility, particularly at minimum enzyme loadings. This method involved three main stages: selective hemicellulose solubilization by subcritical water (SCW) pretreatment, delignifica...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2013.03.069

    authors: Myint AA,Kim DS,Lee HW,Yoon J,Choi IG,Choi JW,Lee YW

    更新日期:2013-10-01 00:00:00

  • Techno-economic analysis of microalgae-based liquid fuels production from wastewater via hydrothermal liquefaction and hydroprocessing.

    abstract::In this work, a conceptual process design of wastewater-based algal biofuels production through hydrothermal liquefaction and hydroprocessing is proposed. Then a steady-state process simulation is performed to calculate the mass and energy analysis of the whole process for the production of hydrocarbons such as diesel...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2019.03.087

    authors: Ranganathan P,Savithri S

    更新日期:2019-07-01 00:00:00

  • Simultaneous sulfide removal and electricity generation with corn stover biomass as co-substrate in microbial fuel cells.

    abstract::Microbial fuel cells (MFCs), representing a promising method to treat combined pollutants with energy recovery, were utilized to remove sulfide and recover power with corn stover filtrate (CSF) as the co-substrate in present study. A maximum power density of 744 mW/m(2) was achieved with sulfide removal of 91% during ...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2013.03.167

    authors: Zhang J,Zhang B,Tian C,Ye Z,Liu Y,Lei Z,Huang W,Feng C

    更新日期:2013-06-01 00:00:00

  • Selective and energy efficient extraction of functional proteins from microalgae for food applications.

    abstract::The use of a single controlled bead milling step of the microalga Tetraselmis suecica resulted in a soluble fraction, rich in functional proteins. This was achieved by fine-tuning the processing time, thereby exploiting the difference in rates of protein and carbohydrate release during milling. Soluble proteins were e...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2018.07.131

    authors: Suarez Garcia E,van Leeuwen J,Safi C,Sijtsma L,Eppink MHM,Wijffels RH,van den Berg C

    更新日期:2018-11-01 00:00:00

  • Rapid start-up of partial nitrification process using benzethonium chloride-a novel nitrite oxidation inhibitor.

    abstract::Benzethonium chloride (BZC) is an antibacterial compound with extensive applications in various anti-infective products. However, the feasibility of attaining partial nitrification of municipal wastewater using BZC has not been reported. In this work, BZC was used for the first time to attain partial nitrification. Ba...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2020.123860

    authors: Cui Y,Gao J,Zhang D,Zhao Y,Wang Y

    更新日期:2020-11-01 00:00:00

  • Effect of temperature on lignin-derived inhibition studied with three structurally different cellobiohydrolases.

    abstract::Non-productive enzyme adsorption onto lignin inhibits enzymatic hydrolysis of lignocellulosic biomass. Three cellobiohydrolases, Trichoderma reesei Cel7A (TrCel7A) and two engineered fusion enzymes, with distinctive modular structures and temperature stabilities were employed to study the effect of temperature on inhi...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2013.07.069

    authors: Rahikainen JL,Moilanen U,Nurmi-Rantala S,Lappas A,Koivula A,Viikari L,Kruus K

    更新日期:2013-10-01 00:00:00

  • Sheep manure vermicompost supplemented with a native diazotrophic bacteria and mycorrhizas for maize cultivation.

    abstract::An orthogonal experimental design L9 (3(4)) with 10 repetitions was used to investigate the effect of Glomus claroideum (0, 1 or 2g(-1) plant), G. fasciculatum (0, 1 or 2g plant(-1)), native diazotrophic bacteria (0, 10(3) and 10(5) UFC ml(-1)) and sheep manure vermicompost (0%, 5% and 10% v/v) on maize plant growth, ...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2008.01.012

    authors: Gutiérrez-Miceli FA,Moguel-Zamudio B,Abud-Archila M,Gutiérrez-Oliva VF,Dendooven L

    更新日期:2008-10-01 00:00:00

  • Recycling of wood chips and wheat dregs for sludge processing.

    abstract::A Buchner filtration study was conducted to investigate the effect on sludge dewatering of adding organic waste solids (wood chips or wheat dregs) to sludge after chemical preconditioning (with ferric chloride or alum). Increasing the dose of wood chips or wheat dregs enhanced sludge filtration performance and increas...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/s0960-8524(00)00098-5

    authors: Lin YF,Jing SR,Lee DY

    更新日期:2001-01-01 00:00:00

  • Microwave-assisted preparation and adsorption performance of activated carbon from biodiesel industry solid reside: influence of operational parameters.

    abstract::Preparation of activated carbon has been attempted using KOH as activating agent by microwave heating from biodiesel industry solid residue, oil palm empty fruit bunch (EFBAC). The significance of chemical impregnation ratio (IR), microwave power and activation time on the properties of activated carbon were investiga...

    journal_title:Bioresource technology

    pub_type: 杂志文章

    doi:10.1016/j.biortech.2011.09.116

    authors: Foo KY,Hameed BH

    更新日期:2012-01-01 00:00:00