Direct electrochemistry of protein-protein complexes involving cytochrome c, cytochrome b5, and plastocyanin.

Abstract:

:The direct electrochemistry of the cytochrome c/cytochrome b5 and cytochrome c/plastocyanin complexes has been investigated at edge-plane graphite and modified gold electrode surfaces, which are selective for one of the two components of the complex. Electrochemical response of one protein at an otherwise electrostatically unfavorable electrode surface was achieved in the presence of the other protein, and the calculated heterogeneous electron-transfer rate constant and diffusion coefficient were found to be in good agreement with the values determined previously from the electrochemistry of the individual proteins [Armstrong, F. A., Hill, H. A. O., & Walton, N. J. (1988) Acc. Chem. Res. 21, 407 and references therein]. A dynamic model of the protein-protein-electrode ternary complex is proposed to explain the promotion effect, and this model is supported by a study comparing the electrochemical responses of covalent and electrostatic cytochrome c/plastocyanin complexes. It is also suggested that the behavior of protein-protein complexes at electrode surfaces could be related to that of the complexes associated with biological membranes.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Bagby S,Barker PD,Guo LH,Hill HA

doi

10.1021/bi00465a010

subject

Has Abstract

pub_date

1990-04-03 00:00:00

pages

3213-9

issue

13

eissn

0006-2960

issn

1520-4995

journal_volume

29

pub_type

杂志文章
  • Deamidation of triosephosphate isomerase in reverse micelles: effects of water on catalysis and molecular wear and tear.

    abstract::The specific deamidation of asparagine-71 of triosephosphate isomerase increases upon substrate binding and catalysis. This deamidation at the dimer interface initiates subunit dissociation, unfolding, and protein degradation. The apparent connection between catalysis and terminal marking supports the concept of "mole...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00188a027

    authors: Garza-Ramos G,Tuena de Gomez-Puyou M,Gomez-Puyou A,Yüksel KU,Gracy RW

    更新日期:1994-06-07 00:00:00

  • Interaction and localization of the retinitis pigmentosa protein RP2 and NSF in retinal photoreceptor cells.

    abstract::RP2 is a ubiquitously expressed protein encoded by a gene associated with X-linked retinitis pigmentosa (XLRP), a retinal degenerative disease that causes severe vision loss. Previous in vitro studies have shown that RP2 binds to ADP ribosylation factor-like 3 (Arl3) and activates its intrinsic GTPase activity, but th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi1005249

    authors: Holopainen JM,Cheng CL,Molday LL,Johal G,Coleman J,Dyka F,Hii T,Ahn J,Molday RS

    更新日期:2010-09-07 00:00:00

  • Thermodynamic parameters of the binding of retinol to binding proteins and to membranes.

    abstract::Retinol (vitamin A alcohol) is a hydrophobic compound and distributes in vivo mainly between binding proteins and cellular membranes. To better clarify the nature of the interactions of retinol with these phases which have a high affinity for it, the thermodynamic parameters of these interactions were studied. The tem...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00468a014

    authors: Noy N,Xu ZJ

    更新日期:1990-04-24 00:00:00

  • pH dependence and structural interpretation of the reactions of Coprinus cinereus peroxidase with hydrogen peroxide, ferulic acid, and 2,2'-azinobis.

    abstract::Steady-state and transient-state analysis of Coprinus cinereus peroxidase, CIP (identical to Arthromyces ramosus peroxidase), was used to characterize the kinetics of the three fundamental steps in heme peroxidase catalysis: compound I (cpd I) formation, cpd I reduction, and compound II (cpd II) reduction. The rate co...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi970387r

    authors: Abelskov AK,Smith AT,Rasmussen CB,Dunford HB,Welinder KG

    更新日期:1997-08-05 00:00:00

  • Internal motions in myosin.

    abstract::High-resolution proton nuclear magnetic resonance (1H NMR) measurements were made on myosin, heavy meromyosin (HMM), myosin subfragment 1 (S1), light meromyosin (LMM), and actin. A strong signal from amino acid side chains undergoing motions too fast to be accounted for by simple rotations of groups on a rigid backbon...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00586a031

    authors: Highsmith S,Akasaka K,Konrad M,Goody R,Holmes K,Wade-Jardetzky N,Jardetzky O

    更新日期:1979-09-18 00:00:00

  • Cloning and expression of goldfish opsin sequences.

    abstract::Five opsin cDNA clones were isolated from a goldfish retina cDNA library and sequenced. On the basis of homology to previously characterized visual pigments, one clone was identified as goldfish rod opsin and a second as a goldfish red cone opsin. Two rhodopsin-like clones were found to be similar to the chicken green...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00052a027

    authors: Johnson RL,Grant KB,Zankel TC,Boehm MF,Merbs SL,Nathans J,Nakanishi K

    更新日期:1993-01-12 00:00:00

  • Structure of the capsid of Kilham rat virus from small-angle neutron scattering.

    abstract::The structure of empty capsids of Kilham rat virus, an autonomous parvovirus with icosahedral symmetry, was investigated by small-angle neutron scattering. From the forward scatter, the molecular weight was determined to be 4.0 X 10(6), and from the Guinier region, the radius of gyration was found to be 105 A in D2O a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00321a044

    authors: Wobbe CR,Mitra S,Ramakrishnan V

    更新日期:1984-12-18 00:00:00

  • Direct tests of the energetic basis of abortive cycling in transcription.

    abstract::Although the synthesis of RNA from a DNA template is (and must be) a generally very stable process to enable transcription of kilobase transcripts, it has long been known that during initial transcription of the first 8-10 bases of RNA complexes are relatively unstable, leading to the release of short abortive RNA tra...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi200620q

    authors: Vahia AV,Martin CT

    更新日期:2011-08-16 00:00:00

  • The Conformational Change in Elongation Factor Tu Involves Separation of Its Domains.

    abstract::Elongation factor Tu (EF-Tu) is a highly conserved GTPase that is responsible for supplying the aminoacylated tRNA to the ribosome. Upon binding to the ribosome, EF-Tu undergoes GTP hydrolysis, which drives a major conformational change, triggering the release of aminoacylated tRNA to the ribosome. Using a combination...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00591

    authors: Lai J,Ghaemi Z,Luthey-Schulten Z

    更新日期:2017-11-14 00:00:00

  • Oxindolealanine-62 lysozyme: equilibrium, calorimetric, and kinetic studies of the reaction with N-acetylglucosamine oligosaccharides.

    abstract::Oxindolealanine-62 lysozyme, formed by reaction with N-bromosuccinimide and purified by using affinity chromatography, was examined in its binding of homologous oligosaccharides of N-acetylglucosamine and in its catalysis of hydrolysis and of transglycosylation of the hexasaccharide of N-acetylglucosamine. Equilibrium...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00558a022

    authors: Shrake A,Rupley JA

    更新日期:1980-08-19 00:00:00

  • Membrane topography of the photosynthetic reaction center polypeptides of Rhodopseudomonas sphaeroides.

    abstract::The topography of the photosynthetic reaction center (RC) polypeptides (H, M, and L) was investigated by proteolysis and radioiodination of membrane vesicles isolated from Rhodopseudomonas sphaeroides. Chromatophores, obtained from French-pressed cell lysates, are closed vesicles' and oriented inside out with respect ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00519a012

    authors: Bachmann RC,Gillies K,Takemoto JY

    更新日期:1981-08-04 00:00:00

  • Barbiturate inhibition of GLUT-1 mediated hexose transport in human erythrocytes exhibits substrate dependence for equilibrium exchange but not unidirectional sugar flux.

    abstract::Barbiturates inhibit GLUT-1 mediated hexose transport both in vivo [Gjedde & Rasmussen (1980) J. Neurochem. 35, 1382-1387; Otsuka et al. (1991) Am. J. Physiol. 261, R265-R275] and in vitro [Honkanen et al. (1995) Biochemistry 34, 535-544]. In the present study, the mechanism by which barbiturates inhibit GLUT-1 mediat...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi962050f

    authors: el-Barbary A,Fenstermacher JD,Haspel HC

    更新日期:1996-12-03 00:00:00

  • Kinetics of oxidative phosphorylation in Paracoccus denitrificans. 1. Mechanism of ATP synthesis at the active site(s) of F0F1-ATPase.

    abstract::(1) The rate of ATP synthesis during NADH-driven aerobic respiration has been measured in plasma membrane vesicles from Paracoccus denitrificans as a function of the concentration of the substrates, ADP and inorganic phosphate (Pi). In both cases, the response of the reaction to changes in the degree of saturation of ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00498a013

    authors: Pérez JA,Ferguson SJ

    更新日期:1990-11-20 00:00:00

  • Differential scanning calorimetric study of a homologous series of fully hydrated saturated mixed-chain C(X):C(X + 6) phosphatidylcholines.

    abstract::The successive high-resolution differential scanning calorimetric (DSC) thermograms for aqueous dispersions of a homologous series of mixed-chain phosphatidylcholines, C(X):C(X + 6)PC, have been recorded and analyzed. In this series of saturated mixed-chain phosphatidylcholines, the total number of carbon atoms in the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00482a018

    authors: Wang ZQ,Lin HN,Huang CH

    更新日期:1990-07-31 00:00:00

  • Binding energetics of phosphorus-containing inhibitors of thermolysin.

    abstract::The importance of a specific hydrogen bond between thermolysin and a phosphonamidate inhibitor, Z-NHCH2-PO(O-)-Leu-Leu (1) [Bartlett, P. A., & Marlowe, C. K. (1987) Science (Washington D.C.) 235, 569-571], has been reevaluated. We have determined the inhibition constants (binding free energies) for thermolysin of phos...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00438a006

    authors: Grobelny D,Goli UB,Galardy RE

    更新日期:1989-06-13 00:00:00

  • Characterization of lens alpha-crystallin tryptophan microenvironments by room temperature phosphorescence spectroscopy.

    abstract::Room temperature phosphorescence techniques were used to study the structural and dynamic features of the tryptophan residues in bovine alpha-crystallin. Upon excitation at 290 nm, the characteristic signature of tryptophan phosphorescence was observed with an emission maximum at 442 +/- 2 nm. The phosphorescence inte...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00439a027

    authors: Berger JW,Vanderkooi JM

    更新日期:1989-06-27 00:00:00

  • Selecting for Fast Protein-Protein Association As Demonstrated on a Random TEM1 Yeast Library Binding BLIP.

    abstract::Protein-protein interactions mediate the vast majority of cellular processes. Though protein interactions obey basic chemical principles also within the cell, the in vivo physiological environment may not allow for equilibrium to be reached. Thus, in vitro measured thermodynamic affinity may not provide a complete pic...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00172

    authors: Cohen-Khait R,Schreiber G

    更新日期:2018-08-07 00:00:00

  • High-yield cleavage of tryptophanyl peptide bonds by o-iodosobenzoic acid.

    abstract::A new procedure to cleave tryptophanyl peptide bonds in high yield is reported. The method involves treatment of the S-alkylated protein with o-iodosobenzoic acid. The procedure is highly selective for tryptophan and does not modify tyrosine or histidine, but may convert methionine to its sulfoxide derivative. The yie...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00584a026

    authors: Mahoney WC,Hermodson MA

    更新日期:1979-08-21 00:00:00

  • Structures of human carbonic anhydrase II/inhibitor complexes reveal a second binding site for steroidal and nonsteroidal inhibitors.

    abstract::Carbonic anhydrase (CA) catalyzes the reversible hydration of carbon dioxide to hydrogen carbonate, and its role in maintaining pH balance has made it an attractive drug target. Steroidal sulfamate esters, inhibitors of the cancer drug target steroid sulfatase (STS), are sequestered in vivo by CA II in red blood cells...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi902178w

    authors: Cozier GE,Leese MP,Lloyd MD,Baker MD,Thiyagarajan N,Acharya KR,Potter BV

    更新日期:2010-04-27 00:00:00

  • Effects of ouabain on the rotational dynamics of renal Na,K-ATPase studied by saturation-transfer EPR.

    abstract::The interaction of a nitroxide spin-labeled derivative of ouabain with sheep kidney Na,K-ATPase and the motional behavior of the ouabain spin label-Na,K-ATPase complex have been studied by means of electron paramagnetic resonance (EPR) and saturation-transfer EPR (ST-EPR). Spin-labeled ouabain binds with high affinity...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00122a019

    authors: Mahaney JE,Grisham CM

    更新日期:1992-02-25 00:00:00

  • pH-dependent spectral and kinetic properties of cytochrome c peroxidase: comparison of freshly isolated and stored enzyme.

    abstract::The effect of long-term storage on the electronic absorption spectrum and the kinetic properties of cytochrome c peroxidase has been investigated. No detectable differences were observed between freshly isolated enzyme and enzyme stored below -20 degrees C, in the crystalline state, for up to 41 months. The electronic...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00470a004

    authors: Vitello LB,Huang M,Erman JE

    更新日期:1990-05-08 00:00:00

  • Phenotypically selected mutations in myosin's actin binding domain demonstrate intermolecular contacts important for motor function.

    abstract::Here, we biochemically characterize Dictyostelium myosin II mutants that were previously phenotypically selected following random mutagenesis and shown to lie in the actin binding domain [Patterson, B., & Spudich, J. A. (1996) Genetics 143, 801-810]. We show that the conditional loss of myosin-dependent activity in vi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi963141f

    authors: Giese KC,Spudich JA

    更新日期:1997-07-15 00:00:00

  • Cyclic peptides incorporating 4-carboxyphenylalanine and phosphotyrosine are potent inhibitors of pp60(c-)(src).

    abstract::The protein tyrosine kinase, pp60(c-)(src), is involved in cellular signaling and is activated during mitosis and in various tumors. We have been employing cyclic decapeptides to identify the determinants for substrate binding and phosphorylation to develop inhibitors competitive with protein substrates of Src. A stru...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992994f

    authors: Wang W,Ramdas L,Sun G,Ke S,Obeyesekere NU,Budde RJ,McMurray JS

    更新日期:2000-05-02 00:00:00

  • Photochemical cross-linking of tRNA1Arg to the 30S ribosomal subunit using aryl azide reagents attached to the anticodon loop.

    abstract::The 2-thiocytidine residue at position 32 of tRNA1Arg from Escherichia coli was modified specifically with three photoaffinity reagents of different lengths, and the corresponding N-acetylarginyl-tRNA1Arg derivatives were cross-linked to the P site of E. coli 70S ribosomes by irradiation. Covalent attachment was depen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00339a011

    authors: Chen JK,Franke LA,Hixson SS,Zimmermann RA

    更新日期:1985-08-27 00:00:00

  • Importance of loops of mitochondrial ADP/ATP carrier for its transport activity deduced from reactivities of its cysteine residues with the sulfhydryl reagent eosin-5-maleimide.

    abstract::The effects of various compounds such as the transport substrate ADP and the transport inhibitors carboxyatractyloside (CATR) and bongkrekic acid (BKA) on the labeling of cysteine residues in the ADP/ATP carrier of bovine heart submitochondrial particles by the SH reagent eosin-5-maleimide (EMA) were studied. Of the f...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00198a019

    authors: Majima E,Shinohara Y,Yamaguchi N,Hong YM,Terada H

    更新日期:1994-08-16 00:00:00

  • Evidence by site-directed mutagenesis supports long-range electron transfer in mouse ribonucleotide reductase.

    abstract::Mammalian ribonucleotide reductase consists of two nonidentical subunits, proteins R1 and R2, each inactive alone. The R1 protein binds the ribonucleotide substrates while the R2 protein contains a binuclear iron center and a tyrosyl free radical, essential for activity. The crystal structures of the corresponding Esc...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00013a016

    authors: Rova U,Goodtzova K,Ingemarson R,Behravan G,Gräslund A,Thelander L

    更新日期:1995-04-04 00:00:00

  • Synthesis and inhibition mechanism of Delta lac-acetogenins, a novel type of inhibitor of bovine heart mitochondrial complex I.

    abstract::We have synthesized Deltalac-acetogenins that are new acetogenin mimics possessing two n-alkyl tails without an alpha,beta-unsaturated gamma-lactone ring and suggested that their inhibition mechanism may be different from that of common acetogenins [Hamada et al. (2004) Biochemistry 43, 3651-3658]. To elucidate the in...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0479003

    authors: Ichimaru N,Murai M,Abe M,Hamada T,Yamada Y,Makino S,Nishioka T,Makabe H,Makino A,Kobayashi T,Miyoshi H

    更新日期:2005-01-18 00:00:00

  • Time-resolved resonance Raman and time-resolved step-scan FTIR studies of nitric oxide reductase from Paracoccus denitrificans: comparison of the heme b3-FeB site to that of the heme-CuB in oxidases.

    abstract::Time-resolved resonance Raman (TR(3)) and time-resolved step-scan (TRS(2)) FTIR spectroscopies have been used to probe the structural dynamics at the heme b(3) proximal and distal sites after carbon monoxide photolysis from fully reduced CO-bound nitric oxide reductase. The Raman spectra of the transient species exhib...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035289m

    authors: Pinakoulaki E,Varotsis C

    更新日期:2003-12-23 00:00:00

  • 51V NMR study of vanadate binding to myosin and its subfragment 1.

    abstract::The binding of various forms of vanadate to myosin and myosin subfragment 1 (S-1) was studied by 51V NMR at increasing vanadate concentrations between 0.06 and 1.0 mM. The distribution of the various forms of vanadate in the solution depended on the total concentration of vanadate. At low concentrations, the predomina...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00490a029

    authors: Ringel I,Peyser YM,Muhlrad A

    更新日期:1990-09-25 00:00:00

  • Tyrosine kinase-mediated serine phosphorylation of adenylyl cyclase.

    abstract::Receptor tyrosine kinase (RTK) activation is associated with modulation of heptahelical receptor-stimulated adenylyl cyclase responses. The mechanisms underlying the RTK-mediated enhancement of adenylyl cyclase function remain unclear. In the present studies, we show that the tyrosine kinase-dependent enhancement of a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0015818

    authors: Tan CM,Kelvin DJ,Litchfield DW,Ferguson SS,Feldman RD

    更新日期:2001-02-13 00:00:00