Regulation of insulin-regulated membrane aminopeptidase activity by its C-terminal domain.

Abstract:

:The development of inhibitors of insulin-regulated aminopeptidase (IRAP), a membrane-bound zinc metallopeptidase, is a promising approach for the discovery of drugs for the treatment of memory loss such as that associated with Alzheimer's disease. There is, however, no consensus in the literature about the mechanism by which inhibition occurs. Sequence alignments, secondary structure predictions, and homology models based on the structures of recently determined related metallopeptidases suggest that the extracellular region consists of four domains. Partial proteolysis and mass spectrometry reported here confirm some of the domain boundaries. We have produced purified recombinant fragments of human IRAP on the basis of these data and examined their kinetic and biochemical properties. Full-length extracellular constructs assemble as dimers with different nonoverlapping fragments dimerizing as well, suggesting an extended dimer interface. Only recombinant fragments containing domains 1 and 2 possess aminopeptidase activity and bind the radiolabeled hexapeptide inhibitor, angiotensin IV (Ang IV). However, fragments lacking domains 3 and 4 possess reduced activity, although they still bind a range of inhibitors with the same affinity as longer fragments. In the presence of Ang IV, IRAP is resistant to proteolysis, suggesting significant conformational changes occur upon binding of the inhibitor. We show that IRAP has a second Zn(2+) binding site, not associated with the catalytic region, which is lost upon binding Ang IV. Modulation of activity caused by domains 3 and 4 is consistent with a conformational change regulating access to the active site of IRAP.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Ascher DB,Cromer BA,Morton CJ,Volitakis I,Cherny RA,Albiston AL,Chai SY,Parker MW

doi

10.1021/bi101893w

subject

Has Abstract

pub_date

2011-04-05 00:00:00

pages

2611-22

issue

13

eissn

0006-2960

issn

1520-4995

journal_volume

50

pub_type

杂志文章
  • Conformations of cytochrome oxidase: thermodynamic evaluation of the interconversion of the 418- and 428-nm forms.

    abstract::Oxidized cytochrome c oxidase exists in two reasonably well-defined conformations, a high-spin conformation with maximal absorption at 418 nm and a low-spin conformation with maximal absorption at 428 nm. The equilibrium between these two conformations has been studied as a function of pH, pressure, and temperature. p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00265a009

    authors: Kornblatt JA,Hui Bon Hoa G

    更新日期:1982-10-26 00:00:00

  • Discovery of a Kojibiose Phosphorylase in Escherichia coli K-12.

    abstract::The substrate profiles for three uncharacterized enzymes (YcjM, YcjT, and YcjU) that are expressed from a cluster of 12 genes ( ycjM-W and ompG) of unknown function in Escherichia coli K-12 were determined. Through a comprehensive bioinformatic and steady-state kinetic analysis, the catalytic function of YcjT was dete...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00392

    authors: Mukherjee K,Narindoshvili T,Raushel FM

    更新日期:2018-05-15 00:00:00

  • Biochemical characterization and crystal structure determination of human heart short chain L-3-hydroxyacyl-CoA dehydrogenase provide insights into catalytic mechanism.

    abstract::Human heart short chain L-3-hydroxyacyl-CoA dehydrogenase (SCHAD) catalyzes the oxidation of the hydroxyl group of L-3-hydroxyacyl-CoA to a keto group, concomitant with the reduction of NAD+ to NADH, as part of the beta-oxidation pathway. The homodimeric enzyme has been overexpressed in Escherichia coli, purified to h...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9829027

    authors: Barycki JJ,O'Brien LK,Bratt JM,Zhang R,Sanishvili R,Strauss AW,Banaszak LJ

    更新日期:1999-05-04 00:00:00

  • A hybrid ribulosebisphosphate carboxylase/oxygenase enzyme exhibiting a substantial increase in substrate specificity factor.

    abstract::Two hybrid ribulose-1,5 bisphosphate carboxylase/oxygenase (RubisCO) enzymes were constructed using RubisCO small subunit genes (rbcS) from two eucaryotic marine organisms, Cylindrotheca sp. N1 and Olisthodiscus luteus, cloned downstream of the RubisCO large subunit gene (rbcL) of the cyanobacterium Synechococcus PCC ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00139a018

    authors: Read BA,Tabita FR

    更新日期:1992-06-23 00:00:00

  • Exploring the Evolutionary History of Kinetic Stability in the α-Lytic Protease Family.

    abstract::In addition to encoding the tertiary fold and stability, the primary sequence of a protein encodes the folding trajectory and kinetic barriers that determine the speed of folding. How these kinetic barriers are encoded is not well understood. Here, we use evolutionary sequence variation in the α-lytic protease (αLP) p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.0c00720

    authors: Nixon CF,Lim SA,Sailer ZR,Zheludev IN,Gee CL,Kelch BA,Harms MJ,Marqusee S

    更新日期:2021-01-26 00:00:00

  • Interactions of two monoclonal antibodies with BNP: high resolution epitope mapping using fluorescence correlation spectroscopy.

    abstract::Structure-function studies of antibody-antigen systems include the identification of amino acid residues in the antigen that interact with an antibody and elucidation of their individual contributions to binding affinity. We used fluorescence correlation spectroscopy (FCS) and alanine-scanning mutagenesis to character...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0607047

    authors: Tetin SY,Ruan Q,Saldana SC,Pope MR,Chen Y,Wu H,Pinkus MS,Jiang J,Richardson PL

    更新日期:2006-11-28 00:00:00

  • High-resolution mapping of carcinogen binding sites on DNA.

    abstract::We have used a photochemical method to map covalent binding sites of the carcinogen benzo[a]pyrenediol epoxide (BPDE) within DNA from the transcriptional control region of the chicken adult beta-globin gene. Our preliminary low-resolution mapping has demonstrated that this region contains highly preferred BPDE binding...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00358a045

    authors: Boles TC,Hogan ME

    更新日期:1986-05-20 00:00:00

  • Structure-function relationships of the Escherichia coli ATP synthase probed by trypsin digestion.

    abstract::Trypsin cleavage has been used to probe structure-function relationships of the Escherichia coli ATP synthase (ECF1F0). Trypsin cleaved all five subunits, alpha, beta, gamma, delta, and epsilon, in isolated ECF1. Cleavage of the alpha subunit involved the removal of the N-terminal 15 residues, the beta subunit was cle...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00402a016

    authors: Gavilanes-Ruiz M,Tommasino M,Capaldi RA

    更新日期:1988-01-26 00:00:00

  • Disentangling the web of allosteric communication in a homotetramer: heterotropic activation in phosphofructokinase from Escherichia coli.

    abstract::Phosphofructokinase from Escherichia coli (EcPFK) is a homotetramer with four active sites and four allosteric sites. Understanding the allosteric activation of EcPFK by MgADP has been complicated by the complex web of possible interactions, including active site homotropic interactions, allosteric site homotropic int...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi048569q

    authors: Fenton AW,Paricharttanakul NM,Reinhart GD

    更新日期:2004-11-09 00:00:00

  • The vitelline envelope of eggs from the giant keyhole limpet Megathura crenulata. II. Products formed by lysis with sperm enzymes and dithiothreitol.

    abstract::The egg vitelline envelope of the marine invertebrate, Megathura crenulata, was lyzed either by sperm lysins A, B, C or by dithiothreitol. In each case the lysis mixture consisted of two major fractions, I and II, that could be separated by hydroxylapatite chromatography and had different electrophoretic mobilities on...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00651a003

    authors: Heller E,Raftery MA

    更新日期:1976-03-23 00:00:00

  • Exploring the Role of Residue 228 in Substrate and Inhibitor Recognition by VIM Metallo-β-lactamases.

    abstract::β-Lactamase inhibitors (BLIs) restore the efficacy of otherwise obsolete β-lactams. However, commercially available BLIs are not effective against metallo-β-lactamases (MBLs), which continue to be disseminated globally. One group of the most clinically important MBLs is the VIM family. The discovery of VIM-24, a natur...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.5b00106

    authors: Mojica MF,Mahler SG,Bethel CR,Taracila MA,Kosmopoulou M,Papp-Wallace KM,Llarrull LI,Wilson BM,Marshall SH,Wallace CJ,Villegas MV,Harris ME,Vila AJ,Spencer J,Bonomo RA

    更新日期:2015-05-26 00:00:00

  • Unique binding of a novel synthetic inhibitor, N-[3-[4-[4-(amidinophenoxy)carbonyl]phenyl]-2-methyl-2-propenoyl]- N-allylglycine methanesulfonate, to bovine trypsin, revealed by the crystal structure of the complex.

    abstract::Trypsin and N-[3-[4-[4-(amidinophenoxy)carbonyl]phenyl]-2-methyl-2-propenoyl]- N-allylglycine methanesulfonate (1), a newly designed and orally active synthetic trypsin inhibitor, were cocrystallized. The space group of the crystal is P2(1)2(1)2(1) with cell constants a = 63.74 A, b = 63.08 A, and c = 69.38 A, which i...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00039a046

    authors: Odagaki Y,Nakai H,Senokuchi K,Kawamura M,Hamanaka N,Nakamura M,Tomoo K,Ishida T

    更新日期:1995-10-03 00:00:00

  • Calpain inhibition by alpha-ketoamide and cyclic hemiacetal inhibitors revealed by X-ray crystallography.

    abstract::Calpains are intracellular calcium-activated cysteine proteases whose unregulated proteolysis following the loss of calcium homeostasis can lead to acute degeneration during ischemic episodes and trauma, as well as Alzheimer's disease and cataract formation. The determination of the crystal structure of the proteolyti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi060425j

    authors: Cuerrier D,Moldoveanu T,Inoue J,Davies PL,Campbell RL

    更新日期:2006-06-20 00:00:00

  • The role of 2'-hydroxyl groups in an RNA-protein interaction.

    abstract::The role of the 2'-hydroxyl group in RNA--protein interaction has been investigated using MS2 coat protein and its hairpin RNA operator as a model system. Derivatives of the MS2 translational operator were prepared where individual riboses were replaced by deoxyribose and their binding affinities to MS2 coat protein w...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00038a033

    authors: Baidya N,Uhlenbeck OC

    更新日期:1995-09-26 00:00:00

  • Characterization of the collagens synthesized by Chinese hamster ovary cells. Effect of colcemid and dibutyryladenosine cyclic monophosphate.

    abstract::The collagens synthesized by Chinese hamster ovary cells have been isolated and characterized. Although these cells produce very small amounts of collagen, at least five distinct collagenous chains could be identified from radiolabeled media and cell extracts after limited pepsin digestion. Two chains were characteriz...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00262a031

    authors: Limeback H,Sodek J,Aubin J

    更新日期:1982-09-14 00:00:00

  • Decreased amyloidogenicity caused by mutational modulation of surface properties of the immunoglobulin light chain BRE variable domain.

    abstract::Amyloid formation by immunoglobulin light chain (LC) proteins is associated with amyloid light chain (AL) amyloidosis. Destabilization of the native state of the variable domain of the LC (VL) is known to be one of the critical factors in promoting the formation of amyloid fibrils. However, determining the key residue...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi5007892

    authors: Kobayashi Y,Tsutsumi H,Abe T,Ikeda K,Tashiro Y,Unzai S,Kamikubo H,Kataoka M,Hiroaki H,Hamada D

    更新日期:2014-08-12 00:00:00

  • Kinetic and structural analysis of substrate specificity in two copper amine oxidases from Hansenula polymorpha.

    abstract::The structural underpinnings of enzyme substrate specificity are investigated in a pair of copper amine oxidases (CAOs) from Hansenula polymorpha (HPAO-1 and HPAO-2). The X-ray crystal structure (to 2.0 A resolution) and steady state kinetic data of the second copper amine oxidase (HPAO-2) are presented for comparison...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi901933d

    authors: Chang CM,Klema VJ,Johnson BJ,Mure M,Klinman JP,Wilmot CM

    更新日期:2010-03-23 00:00:00

  • Modification of Escherichia coli ribosomes with the fluorescent reagent N-[[(iodoacetyl)amino]ethyl]-5-naphthylamine-1-sulfonic acid. Identification of derivatized L31' and studies on its intraribosomal properties.

    abstract::N-[[(Iodoacetyl)amino]ethyl]-5-naphthylamine-1-sulfonic acid (IAEDANS) is a fluorescent reagent which reacts covalently with the free thiol groups of proteins. When the reagent is reacted with the Escherichia coli ribosome under mild conditions, gel electrophoresis shows modification of predominantly two proteins, S18...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00346a042

    authors: Hanas JS,Simpson MV

    更新日期:1985-12-03 00:00:00

  • Effects of an anti-beta monoclonal antibody on the interaction of the Escherichia coli RNA polymerase with the lac and TAC promoters.

    abstract::The effects of an inhibitory monoclonal antibody (mAb) raised against the beta subunit of the Escherichia coli RNA polymerase were determined on the kinetics and structural interactions during formation of the open promoter complex (RPo). Analysis of the kinetics of abortive initiation on linear and supercoiled templa...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00409a058

    authors: Rockwell P,Krakow JS

    更新日期:1988-05-03 00:00:00

  • Two crystal structures of the B1 immunoglobulin-binding domain of streptococcal protein G and comparison with NMR.

    abstract::The structure of the 56-residue B1 immunoglobulin-binding domain from streptococcal protein G has been determined in two different crystal forms. The crystal structures were deduced by molecular replacement, based on the structure of the B2 domain (Brookhaven accession code 1PGX). Final R values are 0.174 and 0.198 fo...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:

    authors: Gallagher T,Alexander P,Bryan P,Gilliland GL

    更新日期:1994-04-19 00:00:00

  • Evidence for two spectroscopically different dimers of light-harvesting complex I from green plants.

    abstract::A preparation consisting of isolated dimeric peripheral antenna complexes from green plant photosystem I (light-harvesting complex I or LHCI) has been characterized by means of (polarized) steady-state absorption and fluorescence spectroscopy at low temperatures. We show that this preparation can be described reasonab...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0007369

    authors: Ihalainen JA,Gobets B,Sznee K,Brazzoli M,Croce R,Bassi R,van Grondelle R,Korppi-Tommola JE,Dekker JP

    更新日期:2000-07-25 00:00:00

  • Substrate recognition determinants for rhodopsin kinase: studies with synthetic peptides, polyanions, and polycations.

    abstract::Rhodopsin kinase phosphorylates serine- and threonine-containing peptides from bovine rhodopsin's carboxyl-terminal sequence. Km's for the peptides decrease as the length of the peptide is increased over the range 12-31 amino acids, reaching 1.7 mM for peptide 318-348 from the rhodopsin sequence. The Km for phosphoryl...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00448a013

    authors: Palczewski K,Arendt A,McDowell JH,Hargrave PA

    更新日期:1989-10-31 00:00:00

  • Dipeptide metalloendoprotease substrates are glucose transport inhibitors and membrane structure perturbants.

    abstract::Dipeptide substrates for metalloendoproteases have previously been shown to block biological processes requiring membrane fusion. Thus, we employed such compounds as potential inhibitors of the insulin-dependent activation of glucose transport in fat cells. This event is thought to involve vesicle movement from an int...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00361a031

    authors: Aiello LP,Wessling-Resnick M,Pilch PF

    更新日期:1986-07-01 00:00:00

  • Clonal analysis of the glycosylation of immunoglobulin G secreted by murine hybridomas.

    abstract::A panel of 10 hybridomas was assembled to assess the influence of various genetic and biological factors upon glycosylation of secreted monoclonal IgG. After exhaustive Pronase digestion of IgG, glycopeptides were characterized chromatographically by apparent size, charge, and concanavalin A (Con A)-Sepharose and Lens...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00429a065

    authors: Rothman RJ,Warren L,Vliegenthart JF,Härd KJ

    更新日期:1989-02-07 00:00:00

  • Characterization of a novel dUTP-dependent activity of CTP synthetase from Saccharomyces cerevisiae.

    abstract::CTP synthetase [EC 6.3.4.2, UTP:ammonia ligase (ADP-forming)] from the yeast Saccharomyces cerevisiae catalyzes the ATP-dependent transfer of the amide nitrogen from glutamine to the C-4 position of UTP to form CTP. In this work, we demonstrated that CTP synthetase utilized dUTP as a substrate to synthesize dCTP. The ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9920127

    authors: Pappas A,Park TS,Carman GM

    更新日期:1999-12-14 00:00:00

  • Spin equilibrium and quaternary structure change in hemoglobin A. Experiments on a quantitative probe of the stereochemical mechanism of hemoglobin cooperativity.

    abstract::The molecular mechanism of hemoglobin cooperativity was studied kinetically by flash photolysis on mixed-state hemoglobins which consist of three ferrous carboxy subunits and one hybrid ferric subunit including fluoromet, azidomet, cyanatomet, and thiocyanatomet. The effects of conformational transitions on the hybrid...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00593a012

    authors: Cho KC,Hopfield JJ

    更新日期:1979-12-25 00:00:00

  • Comparison of Alicyclobacillus acidocaldarius o-Succinylbenzoate Synthase to Its Promiscuous N-Succinylamino Acid Racemase/ o-Succinylbenzoate Synthase Relatives.

    abstract::Studying the evolution of catalytically promiscuous enzymes like those from the N-succinylamino acid racemase/ o-succinylbenzoate synthase (NSAR/OSBS) subfamily can reveal mechanisms by which new functions evolve. Some enzymes in this subfamily have only OSBS activity, while others catalyze OSBS and NSAR reactions. We...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00088

    authors: Odokonyero D,McMillan AW,Ramagopal UA,Toro R,Truong DP,Zhu M,Lopez MS,Somiari B,Herman M,Aziz A,Bonanno JB,Hull KG,Burley SK,Romo D,Almo SC,Glasner ME

    更新日期:2018-07-03 00:00:00

  • Location of the antigenic determinants of bovine pancreatic ribonuclease.

    abstract::Four antigenic regions of native bovine pancreatic ribonuclease have been located by using antibodies that react specifically with segments 1--13, 31--79, and 80--124. These antibodies were purified by affinity chromatography on columns to which these peptide segments were bound. Analysis of precipitin curves indicate...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00587a019

    authors: Chavez LG Jr,Scheraga HA

    更新日期:1979-10-02 00:00:00

  • SH2 domains mediate the sequential phosphorylation of HS1 protein by p72syk and Src-related protein tyrosine kinases.

    abstract::The protein tyrosine kinase p72syk readily phosphorylates hematopoietic linkage cell-specific protein p50/HS1 with high stoichiometry (up to 4 mol of Pi/mol of protein) and favorable kinetic constants (Km 77 nM, kcat 0.37 s-1), at sites that display the motif that is specifically recognized by the HS2 domains of Src t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9528614

    authors: Ruzzene M,Brunati AM,Marin O,Donella-Deana A,Pinna LA

    更新日期:1996-04-23 00:00:00

  • Turkey gizzard caldesmon: molecular weight determination and calmodulin binding studies.

    abstract::Sedimentation equilibrium and sedimentation velocity measurements demonstrate that turkey gizzard caldesmon is an elongated molecule of molecular mass 75 +/- 2 kDa. The frictional ratio (2.14) is consistent with a prolate ellipsoid of axial ratio 24, corresponding to an apparent length and width of 516 and 21.5 A, res...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00446a039

    authors: Malencik DA,Ausio J,Byles CE,Modrell B,Anderson SR

    更新日期:1989-10-03 00:00:00