Expression of the Distalless-B gene in Ciona is regulated by a pan-ectodermal enhancer module.

Abstract:

:The Ci-Dll-B gene is an early regulator of ectodermal development in the ascidian Ciona intestinalis (Imai et al., 2006). Ci-Dll-B is located in a convergently transcribed bigene cluster with a tandem duplicate, Ci-Dll-A. This clustered genomic arrangement is the same as those of the homologous vertebrate Dlx genes, which are also arranged in convergently transcribed bigene clusters. Sequence analysis of the C. intestinalis Dll-A-B cluster reveals a 378bp region upstream of Ci-Dll-B, termed B1, which is highly conserved with the corresponding region from the congener Ciona savignyi. The B1 element is necessary and sufficient to drive expression of a lacZ reporter gene in a pattern mimicking the endogenous expression of Ci-Dll-B at gastrula stages. This expression pattern which is specific to the entire animal hemisphere is activated preferentially in posterior, or b-lineage, cells by a central portion of B1. Expression in anterior, or a-lineage cells, can be activated by this central portion in combination with the distal part of B1. Anterior expression can also be activated by the central part of B1 plus both the proximal part of B1 and non-conserved sequence upstream of B1. Thus, cis-regulation of early Ci-Dll-B expression is activated by a required submodule in the center of B1, driving posterior expression, which works in combination with redundant submodules that respond to differentially localized anterior factors to produce the total animal hemisphere expression pattern. Interestingly, the intergenic region of the cluster, which is important for expression of the Dlx genes in vertebrates, does not have a specific activating function in the reporter genes tested, but acts as an attenuator in combination with upstream sequences.

journal_name

Dev Biol

journal_title

Developmental biology

authors

Irvine SQ,Vierra DA,Millette BJ,Blanchette MD,Holbert RE

doi

10.1016/j.ydbio.2011.02.009

subject

Has Abstract

pub_date

2011-05-15 00:00:00

pages

432-9

issue

2

eissn

0012-1606

issn

1095-564X

pii

S0012-1606(11)00108-4

journal_volume

353

pub_type

杂志文章
  • Cell lineage analysis of maize bundle sheath and mesophyll cells.

    abstract::Maize leaves are divided into repeated longitudinal units consisting of vascular tissue, bundle sheath (BS), and mesophyll (M) cells. We have carried out a cell lineage analysis of these cell types using six spontaneous striping mutants of maize. We show that certain cell division patterns are preferentially utilized,...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/0012-1606(89)90304-7

    authors: Langdale JA,Lane B,Freeling M,Nelson T

    更新日期:1989-05-01 00:00:00

  • FGF signaling supports Drosophila fertility by regulating development of ovarian muscle tissues.

    abstract::The thisbe (ths) gene encodes a Drosophila fibroblast growth factor (FGF), and mutant females are viable but sterile suggesting a link between FGF signaling and fertility. Ovaries exhibit abnormal morphology including lack of epithelial sheaths and muscle tissues that surround ovarioles. Here we investigated how FGF i...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/j.ydbio.2015.04.023

    authors: Irizarry J,Stathopoulos A

    更新日期:2015-08-01 00:00:00

  • Cardiovascular lesions and skeletal myopathy in mice lacking desmin.

    abstract::In order to further our understanding of the biological role of desmin, the muscle-specific intermediate filament protein, a null mutation in the desmin gene was introduced into the germ line of mice. Despite the complete lack of desmin, these mice developed and reproduced. Since we show that skeletal, cardiac, and sm...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.1996.0122

    authors: Li Z,Colucci-Guyon E,Pinçon-Raymond M,Mericskay M,Pournin S,Paulin D,Babinet C

    更新日期:1996-05-01 00:00:00

  • Defective development of the embryonic liver in N-myc-deficient mice.

    abstract::The mechanisms involved in the formation and the differentiation of the liver remain unclear despite extensive studies. To investigate these events in mouse hepatic development, we have taken advantage of the N-myc mutant mouse line which exhibits abnormal liver development. N-myc mutant embryos die between 11.5 and 1...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.1997.8823

    authors: Giroux S,Charron J

    更新日期:1998-03-01 00:00:00

  • An oocyte-specific astacin family protease, alveolin, is released from cortical granules to trigger egg envelope hardening during fertilization in medaka (Oryzias latipes).

    abstract::It has long been hypothesized that in fishes the contents of cortical granules are involved in the hardening of egg envelope following fertilization. We previously purified the egg envelope hardening initiation factor from the exudates released from activated medaka (Oryzias latipes) eggs and tentatively termed this p...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/j.ydbio.2012.09.016

    authors: Shibata Y,Iwamatsu T,Suzuki N,Young G,Naruse K,Nagahama Y,Yoshikuni M

    更新日期:2012-12-15 00:00:00

  • beta-lactamase as a marker for gene expression in live zebrafish embryos.

    abstract::In this report we describe the development of a sensitive assay for gene expression in zebrafish embryos using beta-lactamase as a reporter gene. We show that injection of a green fluorescent substrate for beta-lactamase allows the detection of reporter gene expression in live embryos. The beta-lactamase enzyme cataly...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.1998.8999

    authors: Raz E,Zlokarnik G,Tsien RY,Driever W

    更新日期:1998-11-15 00:00:00

  • Autonomous early differentiation of neurons and muscle cells in single cell cultures.

    abstract::The extent to which early differentiation of neurons and muscle cells is autonomous or governed by soluble factors released from other cells has been examined by following development of single cells plated alone in a simple, defined culture medium. The differentiation of electrical excitability and sensitivity to neu...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/0012-1606(86)90173-9

    authors: Henderson LP,Spitzer NC

    更新日期:1986-02-01 00:00:00

  • Analysis of visual system development in Drosophila melanogaster: mutations at the Glued locus.

    abstract::We have analyzed several aspects of the development of flies carrying mutations at the Glued locus. Optic lobe abnormalities in individuals heterozygous for the original Glued allele were previously shown to result from an action of this mutation in the retinula cells. We have estimated when the functioning of this ge...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/0012-1606(83)90256-7

    authors: Harte PJ,Kankel DR

    更新日期:1983-09-01 00:00:00

  • Confocal and video imaging of cytoskeleton dynamics in the leech zygote.

    abstract::Ooplasmic segregation in the late interphase zygote of the leech Theromyzon trizonare is accomplished by reorganization of an ectoplasmic cytoskeleton formed by polar rings and meridional bands. The dynamic properties of this cytoskeleton were explored by time-lapse confocal and video microscopy. Cytoskeleton assembly...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/j.ydbio.2004.03.023

    authors: Fernández J,Toro J,Ubilla A

    更新日期:2004-07-01 00:00:00

  • Axis determination in polyspermic Xenopus laevis eggs.

    abstract::Polyspermic Xenopus laevis eggs can be identified easily because of regions of pigment accumulation and white stripes, which arise by a nocodazole-sensitive process. Eggs containing up to four sperm are capable of forming a single embryonic axis. Dispermic eggs display two regions of pigment accumulation, one around e...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/0012-1606(86)90262-9

    authors: Render JA,Elinson RP

    更新日期:1986-06-01 00:00:00

  • Sex determination in hydra: control by a subpopulation of interstitial cells in Hydra oligactis males.

    abstract::The stability of sexual phenotype was examined in a single clone of Hydra oligactis males maintained at two culture temperatures, 18 and 22 degrees C. At these temperatures animals of this species do not reproduce sexually, but reproduce asexually by budding, and males and females are morphologically indistinguishable...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/0012-1606(86)90311-8

    authors: Littlefield CL

    更新日期:1986-10-01 00:00:00

  • Substratum effects on cell dispersal, morphology, and differentiation in cultures of avian neural crest cells.

    abstract::Adhesive extracellular matrix (ECM) molecules appear to play roles in the migration of neural crest cells, and may also provide cues for differentiation of these cells into a variety of phenotypes. We are studying the influences of specific ECM components on crest differentiation at the levels of both individual cells...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/0012-1606(90)90112-v

    authors: Rogers SL,Bernard L,Weston JA

    更新日期:1990-09-01 00:00:00

  • Tissue-specific laminin expression facilitates integrin-dependent association of the embryonic wing disc with the trachea in Drosophila.

    abstract::The interaction of heterologous tissues involves cell adhesion mediated by the extracellular matrix and its receptor integrins. The Drosophila wing disc is an ectodermal invagination that contacts specific tracheal branches at the basolateral cell surface. We show that an alpha subunit of laminin, encoded by wing blis...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/j.ydbio.2006.12.022

    authors: Inoue Y,Hayashi S

    更新日期:2007-04-01 00:00:00

  • Structural alterations in fibronectin correlated with morphological changes in smooth muscle cells.

    abstract::Nontransformed cultures of vascular smooth muscle cells proliferate until they form a confluent sheet of cells. Subsequently, the cells become reorganized to form multicellular nodules that are loosely attached to the substrate. The formation of nodules is facilitated by the addition of medium conditioned by nodular c...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/0012-1606(83)90095-7

    authors: Brennan MJ,Millis AJ,Mann D,Fritz KE

    更新日期:1983-06-01 00:00:00

  • Nemo phosphorylates Even-skipped and promotes Eve-mediated repression of odd-skipped in even parasegments during Drosophila embryogenesis.

    abstract::Drosophila nemo (nmo) and other Nemo-like kinase family members (Nlks) are well-established key regulators of numerous conserved signaling pathways, such as Wg and BMP. nmo mutants display pleiotropic defects at different developmental stages, including the embryo. In this study we describe a detailed characterization...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/j.ydbio.2010.04.008

    authors: Braid LR,Lee W,Uetrecht AC,Swarup S,Papaianni G,Heiler A,Verheyen EM

    更新日期:2010-07-01 00:00:00

  • Viral transduction of trkA into cultured nodose and spinal motor neurons conveys NGF responsiveness.

    abstract::The trkA gene encodes the tyrosine kinase receptor that transduces the NGF signal. We have used a defective herpes simplex virus-1 (HSV-1) vector containing a full-length rat trkA sequence (pHSVtrkA) to express NGF receptors in primary cultures of neonatal nodose neurons and embryonic spinal motor neurons which are no...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.1994.1131

    authors: Xu H,Federoff H,Maragos J,Parada LF,Kessler JA

    更新日期:1994-05-01 00:00:00

  • Localization and function of Bam protein require the benign gonial cell neoplasm gene product.

    abstract::Division of a female Drosophila stem cell produces a daughter stem cell and a cystoblast. The cystoblast produces a syncytial cluster of 16 cells by precisely four mitotic divisions and incomplete cytokinesis. Mutations in genes required for cystoblast differentiation, such as bag-of-marbles, block syncytial cluster f...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.1999.9346

    authors: Lavoie CA,Ohlstein B,McKearin DM

    更新日期:1999-08-15 00:00:00

  • The 5' UTR and 3' UTR of the sperm mitochondria-associated cysteine-rich protein mRNA regulate translation in spermatids by multiple mechanisms in transgenic mice.

    abstract::The Smcp mRNA encoding the sperm mitochondria-associated cysteine-rich protein is translationally repressed in round spermatids and translationally active in elongated spermatids. The patterns of transcription and translation of fusions of the Smcp promoter, the green fluorescent protein coding region (Gfp) and variou...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/j.ydbio.2006.04.468

    authors: Hawthorne SK,Busanelli RR,Kleene KC

    更新日期:2006-09-01 00:00:00

  • Tyrosine kinase-dependent activation of phospholipase Cgamma is required for calcium transient in Xenopus egg fertilization.

    abstract::In a previous study (K.-I. Sato et al., 1999, Dev. Biol. 209, 308-320), we presented evidence that a Src-related protein-tyrosine kinase (PTK), named Xyk, may act upstream of the calcium release in fertilization of the Xenopus egg. In the present study, we examined whether PTK activation of phospholipase Cgamma (PLCga...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.2000.9782

    authors: Sato K,Tokmakov AA,Iwasaki T,Fukami Y

    更新日期:2000-08-15 00:00:00

  • Cusp patterning defect in Tabby mouse teeth and its partial rescue by FGF.

    abstract::Tabby is a mouse mutant characterized by deficient development of the ectodermal organs: teeth, hair, and a subset of glands. Ectodysplasin, the protein encoded by the Tabby gene, was recently identified as a novel TNF-like transmembrane protein but little is known about its function. We have examined the Tabby tooth ...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.1999.9514

    authors: Pispa J,Jung HS,Jernvall J,Kettunen P,Mustonen T,Tabata MJ,Kere J,Thesleff I

    更新日期:1999-12-15 00:00:00

  • Bicaudal-D is essential for egg chamber formation and cytoskeletal organization in drosophila oogenesis.

    abstract::Bicaudal-D (Bic-D) is required for the transport of determinant mRNAs and proteins to the presumptive oocyte, an essential step in the differentiation of the oocyte. Bic-D protein contains four well-defined heptad repeat domains characteristic of intermediate filament proteins. We characterized the ovarian phenotypes ...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.2001.0170

    authors: Oh J,Steward R

    更新日期:2001-04-01 00:00:00

  • Method for disarranging the pigment pattern of zebrafish by optogenetics.

    abstract::To investigate the spatiotemporal dynamics of skin pattern formation, we developed a simple method for artificially disarranging the placement of all three pigment cell types in the body trunk of zebrafish (Danio rerio). We generated transgenic fish with melanophores that ectopically expressed a variant of channelrhod...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/j.ydbio.2018.12.019

    authors: Aramaki T,Kondo S

    更新日期:2020-04-01 00:00:00

  • Presence of mast cell precursors in the yolk sac of mice.

    abstract::Concentration of mast-cell precursors in hematopoietic tissues of mouse embryos was evaluated by a limiting dilution method. Cells from yolk sacs, livers, and bodies of (WB x C57BL/6)F1 (hereafter called WBB6F1)- +/+ embryos were injected directly into the skin of adult WBB6F1-W/Wv mice which were genetically depleted...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/0012-1606(83)90066-0

    authors: Sonoda T,Hayashi C,Kitamura Y

    更新日期:1983-05-01 00:00:00

  • Left and right ventricular contributions to the formation of the interventricular septum in the mouse heart.

    abstract::Mammalian heart development involves complex morphogenetic events which lead to the formation of fully separated left and right atrial and ventricular chambers from a tubular heart. Separation of left and right ventricular chambers is dependent on a single structure, the interventricular septum (IVS), which has both m...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/j.ydbio.2006.02.045

    authors: Franco D,Meilhac SM,Christoffels VM,Kispert A,Buckingham M,Kelly RG

    更新日期:2006-06-15 00:00:00

  • Neuron-muscle contact changes presynaptic resting calcium set-point.

    abstract::The role of retrograde signaling between target cells and their presynaptic partners during early cell-cell interactions was examined in cell culture. Using time-lapse video microscopy and fura-2 calcium analysis, we followed contacts between presynaptic neurites of Helisoma motoneurons and muscle fibers dissociated f...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.1993.1176

    authors: Zoran MJ,Funte LR,Kater SB,Haydon PG

    更新日期:1993-07-01 00:00:00

  • Dazap2 is required for FGF-mediated posterior neural patterning, independent of Wnt and Cdx function.

    abstract::The organization of the embryonic neural plate requires coordination of multiple signal transduction pathways, including fibroblast growth factors (FGFs), bone morphogenetic proteins (BMPs), and WNTs. Many studies have suggested that a critical component of this process is the patterning of posterior neural tissues by...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/j.ydbio.2009.06.019

    authors: Roche DD,Liu KJ,Harland RM,Monsoro-Burq AH

    更新日期:2009-09-01 00:00:00

  • The retention and ultrastructural appearances of various extracellular matrix molecules incorporated into three-dimensional hydrated collagen lattices.

    abstract::Artificial extracellular matrices composed of collagen, glycosaminoglycans (GAG), proteoglycans (PG), plasma fibronectin (FN), and a hyaluronate-binding protein (HABP) have been prepared that morphologically resemble embryonic extracellular matrices in vivo at the light and electron microscope level. The effect of eac...

    journal_title:Developmental biology

    pub_type: 杂志文章,评审

    doi:10.1016/0012-1606(85)90461-0

    authors: Turley EA,Erickson CA,Tucker RP

    更新日期:1985-06-01 00:00:00

  • Expression of HAND gene products may be sufficient for the differentiation of avian neural crest-derived cells into catecholaminergic neurons in culture.

    abstract::Members of the basic helix-loop-helix family of DNA binding proteins have important roles in the development of subpopulations of neural crest-derived neurons. We have cloned the chicken homologues of dHAND (HAND2) and eHAND (HAND1), basic helix-loop-helix DNA binding proteins whose neuronal expression is restricted t...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.1999.9450

    authors: Howard M,Foster DN,Cserjesi P

    更新日期:1999-11-01 00:00:00

  • Expression of Patella vulgata orthologs of engrailed and dpp-BMP2/4 in adjacent domains during molluscan shell development suggests a conserved compartment boundary mechanism.

    abstract::The engrailed gene is well known from its role in segmentation and central nervous system development in a variety of species. In molluscs, however, engrailed is involved in shell formation. So far, it seemed that engrailed had been co-opted uniquely for this particular process in molluscs. Here, we show that, in the ...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1006/dbio.2002.0653

    authors: Nederbragt AJ,van Loon AE,Dictus WJ

    更新日期:2002-06-15 00:00:00

  • Serendipity delta, a Drosophila zinc finger protein present in embryonic nuclei at the onset of zygotic gene transcription.

    abstract::Serendipity delta (sry delta) is a member of a set of Drosophila zinc finger protein genes showing maximal transcription during oogenesis. By using transformant lines, we monitored the zygotic expression of the sry delta gene and characterized some biochemical properties of a sry delta/beta-galactosidase fusion protei...

    journal_title:Developmental biology

    pub_type: 杂志文章

    doi:10.1016/0012-1606(89)90272-8

    authors: Payre F,Yanicostas C,Vincent A

    更新日期:1989-12-01 00:00:00