Intertrial coherence and causal interaction among independent EEG components.

Abstract:

:Over the past few years there has been an increased interest in studying the underlying neural mechanism of attention and cognitive brain activity. This paper aims towards identifying and analyzing distinct responses in an auditory working memory paradigm, as independent components with variable latency, frequency and phase characteristics. The event-related nature of components (either phase or non-phase-locked) over multiple trials is thoroughly examined through intertrial coherence measures. Furthermore, the functional coupling of independent components is investigated through the concept of partial directed coherence depicted as a directed graph. Using these tools, the paper compares issues of activation, connectivity and directionality in the synchronization maps of two populations, of control and Alzheimer's subjects. The results on real data from an oddball experiment verify and further enhance the findings of previous studies and illustrate the potential of the proposed analysis framework.

journal_name

J Neurosci Methods

authors

Zervakis M,Michalopoulos K,Iordanidou V,Sakkalis V

doi

10.1016/j.jneumeth.2011.02.001

subject

Has Abstract

pub_date

2011-04-30 00:00:00

pages

302-14

issue

2

eissn

0165-0270

issn

1872-678X

pii

S0165-0270(11)00076-8

journal_volume

197

pub_type

杂志文章
  • The impact of recent stereological advances on quantitative studies of the nervous system.

    abstract::The usefulness of a number of new stereological principles for unbiased estimation of particle number and sizes and sampling of particles is illustrated together with a novel principle for unbiased estimation of anisotropic surfaces. The examples include descriptions of estimators of neurone and synapse number and siz...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(86)90112-3

    authors: Braendgaard H,Gundersen HJ

    更新日期:1986-10-01 00:00:00

  • The separation and quantification of aminochromes using high-pressure liquid chromatography with electrochemical detection.

    abstract::There is increasing evidence that oxidative stress plays an important role in the pathogenesis of many neurodegenerative diseases including Parkinson's disease (PD). In particular there is support for the participation of oxidized catecholamines in PD. Catecholamines are highly reactive and are readily oxidized to ami...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2004.08.010

    authors: Ochs SD,Westfall TC,Macarthur H

    更新日期:2005-03-30 00:00:00

  • Adenoviral vector-mediated gene transfer and neurotransplantation: possibilities and limitations in grafting of the fetal rat suprachiasmatic nucleus.

    abstract::Several studies have reported on the use of primary neural cells transduced by adenoviral vectors as donor cells in neurotransplantation. In the present investigation, we examined whether adenoviral vector-mediated gene transfer could be used to introduce and express a foreign gene in solid neural transplants of fetal...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(96)00131-8

    authors: van Esseveldt KE,Liu R,Hermens WT,Verhaagen J,Boer GJ

    更新日期:1997-01-01 00:00:00

  • Trial-to-trial noise cancellation of cortical field potentials in awake macaques by autoregression model with exogenous input (ARX).

    abstract::Gamma band synchronization has drawn increasing interest with respect to its potential role in neuronal encoding strategy and behavior in awake, behaving animals. However, contamination of these recordings by power line noise can confound the analysis and interpretation of cortical local field potential (LFP). Existin...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2010.10.029

    authors: Wang Z,Roe AW

    更新日期:2011-01-15 00:00:00

  • Comparison of visually evoked local field potentials in isolated turtle brain: patterned versus blank stimulation.

    abstract::Isolated turtle brain/eye preparation has recently been used as a bloodless animal model for detecting the magnetic resonance imaging (MRI) signal changes produced by visually evoked neuronal currents. The present work aims to determine whether checkerboard-patterned or full field flash (blank) stimulation should be u...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2009.12.005

    authors: Luo Q,Lu H,Lu H,Yang Y,Gao JH

    更新日期:2010-03-15 00:00:00

  • Chronic, intermittent convection-enhanced delivery devices.

    abstract:BACKGROUND:Intraparenchymal convection-enhanced delivery (CED) of therapeutics directly into the brain has long been endorsed as a medium through which meaningful concentrations of drug can be administered to patients, bypassing the blood brain barrier. The translation of the technology to clinic has been hindered by p...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章,评审

    doi:10.1016/j.jneumeth.2015.11.008

    authors: Lewis O,Woolley M,Johnson D,Rosser A,Barua NU,Bienemann AS,Gill SS,Evans S

    更新日期:2016-02-01 00:00:00

  • A weighted index of bilateral brain lesions.

    abstract::Attempts to correlate the amount of bilateral brain injury with behavioral changes can be complicated if the lesions are bilaterally unsymmetrical in volume. Further complications are introduced if unilateral lesions are ineffective in producing behavioral changes. An index, W%, is proposed which is based on the produ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(84)90046-3

    authors: Hodos W,Bobko P

    更新日期:1984-11-01 00:00:00

  • Detection of cerebral arterial gas embolism using regional cerebral oxygen saturation, quantitative electroencephalography, and brain oxygen tension in the swine.

    abstract:BACKGROUND:Cerebral air emboli occur as a complication of invasive medical procedures. The sensitivity of cerebral monitoring methods for the detection of air emboli is not known. This study investigates the utility of electroencephalography and non-invasively measured cerebral oxygen saturation in the detection of int...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2014.03.009

    authors: Weenink RP,Hollmann MW,Stevens MF,Kager J,van Gulik TM,van Hulst RA

    更新日期:2014-05-15 00:00:00

  • Sampling variation caused by A/D cards due to external trigger.

    abstract::In electrophysiological recording, a microcomputer-based analog-to-digital (A/D) card is an indispensable instrument for signal acquisition and analysis. In our studies, evoked responses sampled by our A/D card showed variation among different cycles. If several cycles had been averaged, the resultant waveform would h...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(95)00059-3

    authors: Jaw FS,Lin CW,Wang CY

    更新日期:1995-11-01 00:00:00

  • Recommendations for measuring whisker movements and locomotion in mice with sensory, motor and cognitive deficits.

    abstract:BACKGROUND:Previous studies have measured whisker movements and locomotion to characterise mouse models of neurodegenerative disease. However, these studies have always been completed in isolation, and do not involve standardized procedures for comparisons across multiple mouse models and background strains. NEW METHO...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章,评审

    doi:10.1016/j.jneumeth.2019.108532

    authors: Simanaviciute U,Ahmed J,Brown RE,Connor-Robson N,Farr TD,Fertan E,Gambles N,Garland H,Morton AJ,Staiger JF,Skillings EA,Trueman RC,Wade-Martins R,Wood NI,Wong AA,Grant RA

    更新日期:2020-02-01 00:00:00

  • CSF-1 receptor inhibition as a highly effective tool for depletion of microglia in mixed glial cultures.

    abstract:BACKGROUND:A breakthrough in the microglia and macrophages field was the identification of the macrophage colony stimulating factor-1 (CSF-1) as a pro-survival factor. Its pharmacological inhibition in animals depletes rapidly all microglia and macrophages. Microglial depletion in mixed glial cultures has always repres...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2019.108537

    authors: Hupp S,Iliev AI

    更新日期:2020-02-15 00:00:00

  • Visualization of the dendritic arbor of neurons in intact 500 microm thick brain slices.

    abstract::Characterizing the structure and electrophysiological properties of single neurons is essential for understanding how individual cells contribute to the function of neuronal networks. Following intra-cellular recording from neurons in acute brain slices, the structure of the recorded cell has typically been examined b...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(02)00341-2

    authors: Hamam BN,Kennedy TE

    更新日期:2003-02-15 00:00:00

  • A microscopical assay using a densitometric application of image analysis to quantify neurotransmitter dynamics.

    abstract::We have attempted to demonstrate the technical requirements and performance of a microscopical assay using a densitometric application of image analysis to measure immunohistochemical stain intensity. Not surprisingly, the techniques required were more demanding than those used for the quantification of field and obje...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(92)90048-i

    authors: Cowen T,Thrasivoulou C

    更新日期:1992-10-01 00:00:00

  • Identification and investigation of mitochondria lacking cytochrome c oxidase activity in axons.

    abstract::Mitochondrial defects have been implicated in the degeneration of axons in a number of CNS disorders, including multiple sclerosis. Uniquely, mitochondria harbor the only non-nuclear DNA (mitochondrial DNA or mtDNA), which encodes functionally important subunits of the respiratory chain. The pattern of mitochondrial r...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2010.07.022

    authors: Zambonin J,Engeham S,Campbell GR,Ziabreva I,Beadle NE,Taylor RW,Mahad DJ

    更新日期:2010-09-30 00:00:00

  • A low-cost solution to measure mouse licking in an electrophysiological setup with a standard analog-to-digital converter.

    abstract::Licking behavior in rodents is widely used to determine fluid consumption in various behavioral contexts and is a typical example of rhythmic movement controlled by internal pattern-generating mechanisms. The measurement of licking behavior by commercially available instruments is based on either tongue protrusion int...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2005.10.023

    authors: Hayar A,Bryant JL,Boughter JD,Heck DH

    更新日期:2006-06-15 00:00:00

  • Quantitative monitoring of activity-dependent bulk endocytosis of synaptic vesicle membrane by fluorescent dextran imaging.

    abstract::Activity-dependent bulk endocytosis (ADBE) is the dominant synaptic vesicle (SV) retrieval mode in central nerve terminals during periods of intense neuronal activity. Despite this fact there are very few real time assays that report the activity of this critical SV retrieval mode. In this paper we report a simple and...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2009.09.016

    authors: Clayton EL,Cousin MA

    更新日期:2009-12-15 00:00:00

  • Direct transdifferentiation of human Wharton's jelly mesenchymal stromal cells into cholinergic-like neurons.

    abstract::Barckground Alzheimer's disease (AD) is mainly caused by cellular loss and dysfunction of the basal forebrain cholinergic neurons and cholinergic axons in the cortex leading to slowly progressive decline in learning and memory performance. Unfortunately, no definitive treatment to halt neural cell loss exists to date....

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2018.11.019

    authors: Mendivil-Perez M,Velez-Pardo C,Jimenez-Del-Rio M

    更新日期:2019-01-15 00:00:00

  • Double labeling of cytochrome oxidase and gamma-aminobutyric acid in central nervous system neurons of adult cats.

    abstract::The relationship between the levels of cytochrome oxidase and gamma-aminobutyric acid (GABA) was investigated within single neurons by double labeling the 2 markers in the same section. Double staining was equally effective when immunogold-silver staining of GABA was followed by indirect immunoperoxidase labeling of c...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(89)90129-5

    authors: Luo XG,Hevner RF,Wong-Riley MT

    更新日期:1989-12-01 00:00:00

  • A wavelet based algorithm for the identification of oscillatory event-related potential components.

    abstract::Event related potentials (ERPs) are very feeble alterations in the ongoing electroencephalogram (EEG) and their detection is a challenging problem. Based on the unique time-based parameters derived from wavelet coefficients and the asymmetry property of wavelets a novel algorithm to separate ERP components in single-t...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2014.06.004

    authors: Aniyan AK,Philip NS,Samar VJ,Desjardins JA,Segalowitz SJ

    更新日期:2014-08-15 00:00:00

  • Electron-cytochemical localization of succinic semialdehyde dehydrogenase activity in Purkinje neurons and hepatocytes of the rat.

    abstract::A method is presented for the ultrastructural demonstration of succinate semialdehyde dehydrogenase (SSADH) activity in cerebellar Purkinje neurons and liver hepatocytes; SSADH is an enzyme involved in the degradation of gamma-aminobutyric acid (GABA). Incubation media originally used for light microscopy were conside...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(86)90032-4

    authors: Bernocchi G,Barni S,Biggiogera M

    更新日期:1986-07-01 00:00:00

  • Use of fNIRS to assess resting state functional connectivity.

    abstract::Recently, resting state functional connectivity (RSFC) studies based on fMRI and EEG/MEG have provided valuable insight into the intrinsic functional architecture of the human brain. However, whether functional near infrared spectroscopy (fNIRS), a suitable imaging method for infant and patient populations, can be use...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2009.11.010

    authors: Lu CM,Zhang YJ,Biswal BB,Zang YF,Peng DL,Zhu CZ

    更新日期:2010-02-15 00:00:00

  • A new constrained ICA approach for optimal signal decomposition in polarized light imaging.

    abstract:BACKGROUND:Polarized light imaging (PLI) has evolved into a powerful neuroimaging tool to analyze fiber tracts with submillimeter resolution in microtome sections of postmortem human brain tissue. In PLI polarized light changes its polarization state while passing through birefringent tissue, i.e., myelinated axons, wh...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2013.08.022

    authors: Breuer L,Axer M,Dammers J

    更新日期:2013-10-30 00:00:00

  • Chromatin immunoprecipitation and gene expression analysis of neuronal subtypes after fluorescence activated cell sorting.

    abstract:BACKGROUND:With advances in cell capture, gene expression can now be studied in neuronal subtypes and single cells; however, studying epigenetic mechanisms that underlie these changes presents challenges. Moreover, chromatin immunoprecipitation (ChIP) protocols optimized for low cell number do not adequately address te...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2016.02.006

    authors: Finegersh A,Homanics GE

    更新日期:2016-04-01 00:00:00

  • Quantitative morphological study of microglial cells in the ischemic rat brain using principal component analysis.

    abstract::Pathogenic stimuli induce alterations in the morphology of microglial cells. We analysed changes in lectin-stained cells on the 1st, 3rd, 7th or 14th day after transient global ischemia. Three areas differing in the degree of microglial reaction were selected for analysis: the upper cerebral cortex, the hippocampal CA...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2005.01.009

    authors: Soltys Z,Orzylowska-Sliwinska O,Zaremba M,Orlowski D,Piechota M,Fiedorowicz A,Janeczko K,Oderfeld-Nowak B

    更新日期:2005-07-15 00:00:00

  • Long-term culturing of porcine nodose ganglia.

    abstract:BACKGROUND:Neuronal cell cultures are widely used in the field of neuroscience. Cell dissociation allows for the isolation of a desired cell type, yet the neuronal complexity that distinguishes the nervous system is often lost as a result. Thus, culturing neural tissues in ex vivo format provides a physiological contex...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2019.108546

    authors: Kuan SP,Atanasova KR,Guevara MV,Collins EN,Reznikov LR

    更新日期:2020-02-15 00:00:00

  • A microdevice platform for visualizing mitochondrial transport in aligned dopaminergic axons.

    abstract::Experimental evidence points to the importance of mitochondrial transport defects in contributing to major neurodegenerative diseases, such as Parkinson's disease (PD). Studies of mitochondrial transport along single axons are difficult with traditional dissociated culture systems and the fragility of the midbrain dop...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2012.05.021

    authors: Lu X,Kim-Han JS,O'Malley KL,Sakiyama-Elbert SE

    更新日期:2012-07-30 00:00:00

  • Linear inverse filtering improves spatial separation of nonlinear brain dynamics: a simulation study.

    abstract::We examined topographic variations in nonlinear measures based on scalp voltages, which were generated by two simulated current dipoles each placed in a different hemisphere of a spherical volume conductor (three-shell model). Dipole dynamics were that of a three-torus and the x-component of the Lorenz-system and scal...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(00)00188-6

    authors: Fell J,Hauk O,Hinrichs H

    更新日期:2000-05-15 00:00:00

  • Real-time extracellular measurement of neurotransmitters in conscious sheep.

    abstract::Measurements of neurotransmitters in conscious animals have been restrictive in real-time. The use of specific enzymes within an amperometric probe, based upon a microdialysis membrane, may overcome some of these problems. I report the use of such a probe, with different perfusions of enzymes, to allow real-time measu...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(96)02175-9

    authors: Cook CJ

    更新日期:1997-04-04 00:00:00

  • Long-term survival of dopaminergic neurones in free-floating roller tube cultures of human fetal ventral mesencephalon.

    abstract::Transplantation of human fetal ventral mesencephalon (VM) to Parkinsonian patients has shown beneficial effects in several clinical trials. However, further improvements in the transplantation technique are needed. Delayed surgery, i.e., the in vitro maintenance of the tissue prior to transplantation would present sev...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(94)90160-0

    authors: Spenger C,Studer L,Evtouchenko L,Egli M,Burgunder JM,Markwalder R,Seiler RW

    更新日期:1994-09-01 00:00:00

  • Vibrating glass stylets: tools for precise microsurgery on cuticular structures.

    abstract::Precisely localized lesions in cuticular structures of insects can be produced by fine glass rods, vibrating transversally at frequencies above 100 kHz. The oscillating edge of the glass rod scrapes off the chitinous material at minimal elastic deformation during treatment. The achieved roughness height is in the 0.1 ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(89)90111-8

    authors: Gödde J

    更新日期:1989-07-01 00:00:00