The impact of Ivan Málek's continuous culture concept on bioprocessing.

Abstract:

:This paper summarizes research results and their industrial applications obtained by continuous culture in the former Czechoslovakia. Past achievements as well as recent trends and developments worldwide are presented. The term "Prague School of continuous culture" is put forward and its international activity is outlined. The impact of this school was pervasive across the entire field of applied microbiology and biotechnology in Czechoslovakia and, perhaps, even beyond the country's borders. Continuous culture is a very mature field, and since its establishment it has become a powerful research tool. The present activity in this field amounts to a renaissance of continuous culture, emphasizing new dimensions in bioinformatics and systems biology.

authors

Kyslík P,Prokop A

doi

10.1007/s10295-010-0881-8

subject

Has Abstract

pub_date

2010-12-01 00:00:00

pages

1249-56

issue

12

eissn

1367-5435

issn

1476-5535

journal_volume

37

pub_type

历史文章,杂志文章
  • Improved glycerol to ethanol conversion by E. coli using a metagenomic fragment isolated from an anaerobic reactor.

    abstract::Crude glycerol obtained as a by-product of biodiesel production is a reliable feedstock with the potential to be converted into reduced chemicals with high yields. It has been previously shown that ethanol is the primary product of glycerol fermentation by Escherichia coli. However, few efforts were made to enhance th...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-016-1818-7

    authors: Loaces I,Rodríguez C,Amarelle V,Fabiano E,Noya F

    更新日期:2016-10-01 00:00:00

  • Improvement of bioremediation by Pseudomonas and Burkholderia by mutants of the Vitreoscilla hemoglobin gene (vgb) integrated into their chromosomes.

    abstract::Using genetic engineering, the Vitreoscilla (bacterial) hemoglobin gene (vgb) was integrated stably into the chromosomes of Pseudomonas aeruginosa and Burkholderia sp. strain DNT. This was done for both wild type vgb and two site-directed mutants of vgb that produce Vitreoscilla hemoglobin (VHb) with lowered oxygen af...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-005-0215-4

    authors: Kim Y,Webster DA,Stark BC

    更新日期:2005-04-01 00:00:00

  • Extracellular electron uptake by autotrophic microbes: physiological, ecological, and evolutionary implications.

    abstract::Microbes exchange electrons with their extracellular environment via direct or indirect means. This exchange is bidirectional and supports essential microbial oxidation-reduction processes, such as respiration and photosynthesis. The microbial capacity to use electrons from insoluble electron donors, such as redox-act...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章,评审

    doi:10.1007/s10295-020-02309-0

    authors: Gupta D,Guzman MS,Bose A

    更新日期:2020-10-01 00:00:00

  • Effect of dissolved oxygen on L-methionine production from glycerol by Escherichia coli W3110BL using metabolic flux analysis method.

    abstract::L-Methionine is an essential amino acid in humans, which plays an important role in the synthesis of some important amino acids and proteins. In this work, metabolic flux of batch fermentation of L-methionine with recombinant Escherichia coli W3110BL was analyzed using the flux balance analysis method, which estimated...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-020-02264-w

    authors: Niu K,Xu YY,Wu WJ,Zhou HY,Liu ZQ,Zheng YG

    更新日期:2020-03-01 00:00:00

  • Evaluation of the catalytic specificity, biochemical properties, and milk clotting abilities of an aspartic peptidase from Rhizomucor miehei.

    abstract::In this study, we detail the specificity of an aspartic peptidase from Rhizomucor miehei and evaluate the effects of this peptidase on clotting milk using the peptide sequence of k-casein (Abz-LSFMAIQ-EDDnp) and milk powder. Molecular mass of the peptidase was estimated at 37 kDa, and optimum activity was achieved at ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-016-1780-4

    authors: da Silva RR,Souto TB,de Oliveira TB,de Oliveira LC,Karcher D,Juliano MA,Juliano L,de Oliveira AH,Rodrigues A,Rosa JC,Cabral H

    更新日期:2016-08-01 00:00:00

  • Lasiodiplodan, an exocellular (1→6)-β-D: -glucan from Lasiodiplodia theobromae MMPI: production on glucose, fermentation kinetics, rheology and anti-proliferative activity.

    abstract::Lasiodiplodan, an exopolysaccharide of the (1→6)-β-D: -glucan type, is produced by Lasiodiplodia theobromae MMPI when grown under submerged culture on glucose. The objective of this study was to evaluate lasiodiplodan production by examining the effects of carbon (glucose, fructose, maltose, sucrose) and nitrogen sour...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-012-1112-2

    authors: Alves da Cunha MA,Turmina JA,Ivanov RC,Barroso RR,Marques PT,Fonseca EA,Fortes ZB,Dekker RF,Khaper N,Barbosa AM

    更新日期:2012-08-01 00:00:00

  • Insights from the complete genome sequence of Clostridium tyrobutyricum provide a platform for biotechnological and industrial applications.

    abstract::Genetic research enables the evolution of novel biochemical reactions for the production of valuable chemicals from environmentally-friendly raw materials. However, the choice of appropriate microorganisms to support these reactions, which must have strong robustness and be capable of a significant product output, is ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-017-1956-6

    authors: Wu Q,Liu T,Zhu L,Huang H,Jiang L

    更新日期:2017-08-01 00:00:00

  • Analysis of respiratory activity and carbon usage of a mutant of Azotobacter vinelandii impaired in poly-β-hydroxybutyrate synthesis.

    abstract::In this study, the respiratory activity and carbon usage of the mutant strain of A. vinelandii AT6, impaired in poly-β-hydroxybutyrate (PHB) production, and their relationship with the synthesis of alginate were evaluated. The alginate yield and the specific oxygen uptake rate were higher (2.5-fold and 62 %, respectiv...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-016-1774-2

    authors: Jiménez L,Castillo T,Flores C,Segura D,Galindo E,Peña C

    更新日期:2016-08-01 00:00:00

  • Characterisation of aerobically grown non-spore-forming bacteria from paper mill pulps containing recycled fibres.

    abstract::A total of 179 non-spore-forming bacteria aerobically growing on Nutrient Agar, Plate Count Agar or in specific enrichment conditions for salmonella, campylobacteria, listeria, yersinia or staphylococci, were isolated from 16 untreated paper mill pulps. After phenotypical screening the isolates were characterised by a...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-008-0472-0

    authors: Suihko ML,Skyttä E

    更新日期:2009-01-01 00:00:00

  • Targeted disruption of homoserine dehydrogenase gene and its effect on cephamycin C production in Streptomyces clavuligerus.

    abstract::The aspartate pathway of Streptomyces clavuligerus is an important primary metabolic pathway which provides substrates for beta-lactam synthesis. In this study, the hom gene which encodes homoserine dehydrogenase was cloned from the cephamycin C producer S. clavuligerus NRRL 3585 and characterized. The fully sequenced...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-007-0259-8

    authors: Yilmaz EI,Caydasi AK,Ozcengiz G

    更新日期:2008-01-01 00:00:00

  • Expression, characterization, and improvement of a newly cloned halohydrin dehalogenase from Agrobacterium tumefaciens and its application in production of epichlorohydrin.

    abstract::A gene encoding halohydrin dehalogenase (HHDH) from Agrobacterium tumefaciens CCTCC M 87071 was cloned and expressed in Escherichia coli. To increase activity and stability of HHDH, 14 amino acid residues around the active site and substrate-binding pocket based on the structural analysis and molecular docking were se...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-014-1443-2

    authors: Liu ZQ,Gao AC,Wang YJ,Zheng YG,Shen YC

    更新日期:2014-07-01 00:00:00

  • Enhancement of Streptomyces transglutaminase activity and pro-peptide cleavage efficiency by introducing linker peptide in the C-terminus of the pro-peptide.

    abstract::Streptomyces transglutaminase (TGase) has been widely used in food, pharmaceutical and textile industries. Streptomyces TGase is naturally synthesized as zymogen (pro-TGase), which is then processed to produce active enzyme by removing its N-terminal pro-peptide. Although the pro-peptide is essential for TGase folding...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-012-1221-y

    authors: Chen K,Liu S,Wang G,Zhang D,Du G,Chen J,Shi Z

    更新日期:2013-04-01 00:00:00

  • Thermophilic aerobic treatment of a synthetic wastewater in a membrane-coupled bioreactor.

    abstract::Synthetic wastewater containing alpha-lactose and gelatin was treated in a thermophilic membrane-coupled bioreactor (MBR). Thermophilic (>45 degrees C) treatment represents a potentially advantageous process for high-temperature as well as high-strength industrial wastewaters susceptible to reactor autoheating. Thermo...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1038/sj.jim.7000110

    authors: LaPara TM,Konopka A,Nakatsu CH,Alleman JE

    更新日期:2001-04-01 00:00:00

  • Comparative analysis of the Corynebacterium glutamicum transcriptome in response to changes in dissolved oxygen levels.

    abstract::The dissolved oxygen (DO) level of a culture of Corynebacterium glutamicum (C. glutamicum) in a bioreactor has a significant impact on the cellular redox potential and the distribution of energy and metabolites. In this study, to gain a deeper understanding of the effects of DO on the metabolism of C. glutamicum, we s...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章,收录出版

    doi:10.1007/s10295-016-1854-3

    authors: Liu X,Yang S,Wang F,Dai X,Yang Y,Bai Z

    更新日期:2017-02-01 00:00:00

  • Enhanced poly-γ-L-diaminobutanoic acid production in Bacillus pumilus by combining genome shuffling with multiple antibiotic-resistance.

    abstract::A breeding approach combining genome shuffling with multiple antibiotic-resistance including gentamicin, rifampin and lincomycin, was developed in this research to improve the poly-γ-L-diaminobutanoic acid (γ-PAB) production in Bacillus pumilus LS-1. By this unique strategy, recombinants from the third round of genome...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-020-02315-2

    authors: Li S,Wang L,Wang N

    更新日期:2020-12-01 00:00:00

  • Ammonia oxidizing bacteria and archaea in horizontal flow biofilm reactors treating ammonia-contaminated air at 10 °C.

    abstract::The objective of this study was to demonstrate the feasibility of novel, Horizontal Flow Biofilm Reactor (HFBR) technology for the treatment of ammonia (NH3)-contaminated airstreams. Three laboratory-scale HFBRs were used for remediation of an NH3-containing airstream at 10 °C during a 90-d trial to test the efficacy ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-016-1740-z

    authors: Gerrity S,Clifford E,Kennelly C,Collins G

    更新日期:2016-05-01 00:00:00

  • Advances in microbial culturing conditions to activate silent biosynthetic gene clusters for novel metabolite production.

    abstract::Natural products (NPs) produced by bacteria and fungi are often used as therapeutic agents due to their complex structures and wide range of bioactivities. Enzymes that build NPs are encoded by co-localized biosynthetic gene clusters (BGCs), and genome sequencing has recently revealed that many BGCs are "silent" under...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章,评审

    doi:10.1007/s10295-019-02198-y

    authors: Tomm HA,Ucciferri L,Ross AC

    更新日期:2019-10-01 00:00:00

  • Production of nisin Z using Lactococcus lactis IO-1 from hydrolyzed sago starch.

    abstract::A membrane bioreactor for production of nisin Z was constructed using Lactococcus lactis IO-1 in continuous culture using hydrolyzed sago starch as carbon source. A strategy used to enhance the productivity of nisin Z was to maintain the cells in a continuous growth at high cell concentration. This resulted in a volum...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-008-0511-x

    authors: Carvajal-Zarrabal O,Nolasco-Hipólito C,Bujang KB,Ishizaki A

    更新日期:2009-03-01 00:00:00

  • L(+)-lactic acid production by co-fermentation of glucose and xylose with Rhizopus oryzae obtained by low-energy ion beam irradiation.

    abstract::Low-energy ion beam irradiation (10-200 keV) has been proved to have a wide range of biological effects in recent years. When Rhizopus oryzae PW352 was irradiated with a 15-keV low-energy ion beam an L(+)-lactic acid high-yield mutant, RQ4015, was obtained. When 150 g/l glucose was used as the sole carbon source, L(+)...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-009-0621-0

    authors: Wang P,Li J,Wang L,Tang ML,Yu ZL,Zheng ZM

    更新日期:2009-11-01 00:00:00

  • Improving conjugation efficacy of Sorangium cellulosum by the addition of dual selection antibiotics.

    abstract::The conjugation protocols in myxobacterium Sorangium cellulosum are often inapplicable due to the strain-specific sensitivity to the presence of Escherichia coli cells or the resistances to many antibiotics. Here we report that the conjugative transfer of the mobilizable plasmid pCVD442 from E. coli DH5alpha (lambda p...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-008-0395-9

    authors: Xia ZJ,Wang J,Hu W,Liu H,Gao XZ,Wu ZH,Zhang PY,Li YZ

    更新日期:2008-10-01 00:00:00

  • The use of Macronet resins to recover gamma-decalactone produced by Rhodotorula aurantiaca from the culture broth.

    abstract::During the biotransformation of castor oil into gamma-decalactone, R. aurantiaca produced both the lactone form and its precursor (4-hydroxydecanoic acid). After six days of culture, a maximum yield of gamma-decalactone of 6.5 g/l was obtained. The parameters of gamma-decalactone adsorption on three Macronet resins (M...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-009-0659-z

    authors: Alchihab M,Aldric JM,Aguedo M,Destain J,Wathelet JP,Thonart P

    更新日期:2010-02-01 00:00:00

  • Isolation and characterization of endophytic huperzine A-producing fungi from Huperzia serrata.

    abstract::Huperzia serrata is a producer of huperzine A (HupA), a cholinesterase inhibitor (ChEI). Over 120 endophytic fungi were recovered from this plant and screened for Hup-A and nine were found. These nine represented seven different fungal genera with the most significant producer being Shiraia sp. A total of 127 endophyt...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-010-0905-4

    authors: Wang Y,Zeng QG,Zhang ZB,Yan RM,Wang LY,Zhu D

    更新日期:2011-09-01 00:00:00

  • Antimicrobial compounds produced by Lactobacillus sakei subsp. sakei 2a, a bacteriocinogenic strain isolated from a Brazilian meat product.

    abstract::Bacteriocins produced by lactic acid bacteria are gaining increased importance due to their activity against undesirable microorganisms in foods. In this study, a concentrated acid extract of a culture of Lactobacillus sakei subsp. sakei 2a, a bacteriocinogenic strain isolated from a Brazilian pork product, was purifi...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-009-0684-y

    authors: de Carvalho KG,Bambirra FH,Kruger MF,Barbosa MS,Oliveira JS,Santos AM,Nicoli JR,Bemquerer MP,de Miranda A,Salvucci EJ,Sesma FJ,Franco BD

    更新日期:2010-04-01 00:00:00

  • The application of multi-parameter flow cytometry to the study of recombinant Escherichia coli batch fermentation processes.

    abstract::Multi-parameter flow cytometric techniques coupled with dual colour fluorescent staining were used to study the physical and metabolic consequences of inclusion body formation in batch cultures of the recombinant Escherichia coli strain MSD3735. This strain contains a plasmid coding for the isopropylthiogalactopyranos...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-004-0151-8

    authors: Lewis G,Taylor IW,Nienow AW,Hewitt CJ

    更新日期:2004-08-01 00:00:00

  • Poly(hydroxyalkanoate) synthase genotype and PHA production of Pseudomonas corrugata and P. mediterranea.

    abstract::A collection of Pseudomonas corrugata and P. mediterranea strains, two closely related species, was evaluated for the presence and variability of pha loci. Using PCR methods that specifically amplify segments of medium-chain-length poly(hydroxyalkanoate) (mcl-PHA) synthase genes, we demonstrated the presence of phaC1 ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-005-0205-6

    authors: Solaiman DK,Catara V,Greco S

    更新日期:2005-02-01 00:00:00

  • Development of a whole-cell biocatalyst with NADPH regeneration system for biosulfoxidation.

    abstract::A formate dehydrogenase gene (fdh) originated from Candida boidinii was co-expressed in E. coli BL21 (DE3) with the cyclohexanone monooxygenase gene (chmo) cloned from Acinetobacter calcoaceticus NCIMB 9871. The co-expression system was then used as a whole-cell biocatalyst to synthesize chiral phenyl methyl sulfoxide...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-013-1288-0

    authors: Zhai XH,Ma YH,Lai DY,Zhou S,Chen ZM

    更新日期:2013-08-01 00:00:00

  • Antifungal activities of actinomycete strains associated with high-altitude sagebrush rhizosphere.

    abstract::The antifungal-producing potential of actinomycete populations from the rhizosphere of low-altitude sagebrush, Artemisia tridentata, has been examined. In a continued investigation of new sources of antifungal-producing microorganisms, this study examined the antifungal-producing potential of actinomycetes from the rh...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-005-0007-x

    authors: Jiménez-Esquilín AE,Roane TM

    更新日期:2005-08-01 00:00:00

  • Scalable economic extracellular synthesis of CdS nanostructured particles by a non-pathogenic thermophile.

    abstract::We report microbially facilitated synthesis of cadmium sulfide (CdS) nanostructured particles (NP) using anaerobic, metal-reducing Thermoanaerobacter sp. The extracellular CdS crystallites were <10 nm in size with yields of ~3 g/L of growth medium/month with demonstrated reproducibility and scalability up to 24 L. Dur...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-013-1321-3

    authors: Moon JW,Ivanov IN,Duty CE,Love LJ,Rondinone AJ,Wang W,Li YL,Madden AS,Mosher JJ,Hu MZ,Suresh AK,Rawn CJ,Jung H,Lauf RJ,Phelps TJ

    更新日期:2013-11-01 00:00:00

  • Model-based biotechnological potential analysis of Kluyveromyces marxianus central metabolism.

    abstract::The non-conventional yeast Kluyveromyces marxianus is an emerging industrial producer for many biotechnological processes. Here, we show the application of a biomass-linked stoichiometric model of central metabolism that is experimentally validated, and mass and charge balanced for assessing the carbon conversion effi...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-017-1946-8

    authors: Pentjuss A,Stalidzans E,Liepins J,Kokina A,Martynova J,Zikmanis P,Mozga I,Scherbaka R,Hartman H,Poolman MG,Fell DA,Vigants A

    更新日期:2017-08-01 00:00:00

  • Fermentative production of self-toxic fungal secondary metabolites.

    abstract::Fungi are well known for their vast diversity of secondary metabolites that include many life-saving drugs and highly toxic mycotoxins. In general, fungal cultures producing such metabolites are immune to their toxic effects. However, some are known to produce self-toxic compounds that can pose production optimization...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-009-0678-9

    authors: Singh MP,Leighton MM,Barbieri LR,Roll DM,Urbance SE,Hoshan L,McDonald LA

    更新日期:2010-04-01 00:00:00