Connectivity reflects coding: a model of voltage-based STDP with homeostasis.

Abstract:

:Electrophysiological connectivity patterns in cortex often have a few strong connections, which are sometimes bidirectional, among a lot of weak connections. To explain these connectivity patterns, we created a model of spike timing-dependent plasticity (STDP) in which synaptic changes depend on presynaptic spike arrival and the postsynaptic membrane potential, filtered with two different time constants. Our model describes several nonlinear effects that are observed in STDP experiments, as well as the voltage dependence of plasticity. We found that, in a simulated recurrent network of spiking neurons, our plasticity rule led not only to development of localized receptive fields but also to connectivity patterns that reflect the neural code. For temporal coding procedures with spatio-temporal input correlations, strong connections were predominantly unidirectional, whereas they were bidirectional under rate-coded input with spatial correlations only. Thus, variable connectivity patterns in the brain could reflect different coding principles across brain areas; moreover, our simulations suggested that plasticity is fast.

journal_name

Nat Neurosci

journal_title

Nature neuroscience

authors

Clopath C,Büsing L,Vasilaki E,Gerstner W

doi

10.1038/nn.2479

subject

Has Abstract

pub_date

2010-03-01 00:00:00

pages

344-52

issue

3

eissn

1097-6256

issn

1546-1726

pii

nn.2479

journal_volume

13

pub_type

杂志文章
  • Morphology of Heschl's gyrus reflects enhanced activation in the auditory cortex of musicians.

    abstract::Using magnetoencephalography (MEG), we compared the processing of sinusoidal tones in the auditory cortex of 12 non-musicians, 12 professional musicians and 13 amateur musicians. We found neurophysiological and anatomical differences between groups. In professional musicians as compared to non-musicians, the activity ...

    journal_title:Nature neuroscience

    pub_type: 临床试验,杂志文章

    doi:10.1038/nn871

    authors: Schneider P,Scherg M,Dosch HG,Specht HJ,Gutschalk A,Rupp A

    更新日期:2002-07-01 00:00:00

  • Dual origins of the mammalian accessory olfactory bulb revealed by an evolutionarily conserved migratory stream.

    abstract::The accessory olfactory bulb (AOB) is a critical olfactory structure that has been implicated in mediating social behavior. It receives input from the vomeronasal organ and projects to targets in the amygdaloid complex. Its anterior and posterior components (aAOB and pAOB) display molecular, connectional and functiona...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn.3297

    authors: Huilgol D,Udin S,Shimogori T,Saha B,Roy A,Aizawa S,Hevner RF,Meyer G,Ohshima T,Pleasure SJ,Zhao Y,Tole S

    更新日期:2013-02-01 00:00:00

  • Striatal neurons directly converted from Huntington's disease patient fibroblasts recapitulate age-associated disease phenotypes.

    abstract::In Huntington's disease (HD), expansion of CAG codons in the huntingtin gene (HTT) leads to the aberrant formation of protein aggregates and the differential degeneration of striatal medium spiny neurons (MSNs). Modeling HD using patient-specific MSNs has been challenging, as neurons differentiated from induced plurip...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/s41593-018-0075-7

    authors: Victor MB,Richner M,Olsen HE,Lee SW,Monteys AM,Ma C,Huh CJ,Zhang B,Davidson BL,Yang XW,Yoo AS

    更新日期:2018-03-01 00:00:00

  • Cocaine inverts rules for synaptic plasticity of glutamate transmission in the ventral tegmental area.

    abstract::The manner in which drug-evoked synaptic plasticity affects reward circuits remains largely elusive. We found that cocaine reduced NMDA receptor excitatory postsynaptic currents and inserted GluA2-lacking AMPA receptors in dopamine neurons of mice. Consequently, a stimulation protocol pairing glutamate release with hy...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn.2763

    authors: Mameli M,Bellone C,Brown MT,Lüscher C

    更新日期:2011-04-01 00:00:00

  • Gating of auditory responses in the vocal control system of awake songbirds.

    abstract::Nucleus HVc of the avian song system is a forebrain structure critical in song production, perception and learning. Here we show that most HVc neurons that respond to auditory stimuli under anesthesia show no responses to the same stimulus in the awake, unrestrained bird. This suppression of auditory responses in awak...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/2232

    authors: Schmidt MF,Konishi M

    更新日期:1998-10-01 00:00:00

  • Continuous shifts in the active set of spinal interneurons during changes in locomotor speed.

    abstract::The classic 'size principle' of motor control describes how increasingly forceful movements arise by the recruitment of motoneurons of progressively larger size and force output into the active pool. We explored the activity of pools of spinal interneurons in larval zebrafish and found that increases in swimming speed...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn.2225

    authors: McLean DL,Masino MA,Koh IY,Lindquist WB,Fetcho JR

    更新日期:2008-12-01 00:00:00

  • Synaptic N6-methyladenosine (m6A) epitranscriptome reveals functional partitioning of localized transcripts.

    abstract::A localized transcriptome at the synapse facilitates synapse-, stimulus- and transcript-specific local protein synthesis in response to neuronal activity. While enzyme-mediated mRNA modifications are known to regulate cellular mRNA turnover, the role of these modifications in regulating synaptic RNA has not been studi...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/s41593-018-0173-6

    authors: Merkurjev D,Hong WT,Iida K,Oomoto I,Goldie BJ,Yamaguti H,Ohara T,Kawaguchi SY,Hirano T,Martin KC,Pellegrini M,Wang DO

    更新日期:2018-07-01 00:00:00

  • Distinct spatial frequency sensitivities for processing faces and emotional expressions.

    abstract::High and low spatial frequency information in visual images is processed by distinct neural channels. Using event-related functional magnetic resonance imaging (fMRI) in humans, we show dissociable roles of such visual channels for processing faces and emotional fearful expressions. Neural responses in fusiform cortex...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn1057

    authors: Vuilleumier P,Armony JL,Driver J,Dolan RJ

    更新日期:2003-06-01 00:00:00

  • Drug-induced GABA transporter currents enhance GABA release to induce opioid withdrawal behaviors.

    abstract::Neurotransmitter transporters can affect neuronal excitability indirectly via modulation of neurotransmitter concentrations or directly via transporter currents. A physiological or pathophysiological role for transporter currents has not been described. We found that GABA transporter 1 (GAT-1) cation currents directly...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn.2940

    authors: Bagley EE,Hacker J,Chefer VI,Mallet C,McNally GP,Chieng BC,Perroud J,Shippenberg TS,Christie MJ

    更新日期:2011-10-30 00:00:00

  • Prototype-referenced shape encoding revealed by high-level aftereffects.

    abstract::We used high-level configural aftereffects induced by adaptation to realistic faces to investigate visual representations underlying complex pattern perception. We found that exposure to an individual face for a few seconds generated a significant and precise bias in the subsequent perception of face identity. In the ...

    journal_title:Nature neuroscience

    pub_type: 临床试验,杂志文章

    doi:10.1038/82947

    authors: Leopold DA,O'Toole AJ,Vetter T,Blanz V

    更新日期:2001-01-01 00:00:00

  • Specific requirement of NMDA receptors for long-term memory consolidation in Drosophila ellipsoid body.

    abstract::In humans and many other animals, memory consolidation occurs through multiple temporal phases and usually involves more than one neuroanatomical brain system. Genetic dissection of Pavlovian olfactory learning in Drosophila melanogaster has revealed multiple memory phases, but the predominant view holds that all memo...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn2005

    authors: Wu CL,Xia S,Fu TF,Wang H,Chen YH,Leong D,Chiang AS,Tully T

    更新日期:2007-12-01 00:00:00

  • Area identity shifts in the early cerebral cortex of Emx2-/- mutant mice.

    abstract::The specification of area identities in the cerebral cortex is a complex process, primed by intrinsic cortical cues and refined after the arrival of afferent fibers from the thalamus. Little is known about the genetic control of the early steps of this process, but the distinctive expression pattern of the homeogene E...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/76630

    authors: Mallamaci A,Muzio L,Chan CH,Parnavelas J,Boncinelli E

    更新日期:2000-07-01 00:00:00

  • Prior experience of rotation is not required for recognizing objects seen from different angles.

    abstract::An object viewed from different angles can be recognized and distinguished from similar distractors after the viewer has had experience watching it rotate. It has been assumed that as an observer watches the rotation, separate representations of individual views become associated with one another. However, we show her...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn1600

    authors: Wang G,Obama S,Yamashita W,Sugihara T,Tanaka K

    更新日期:2005-12-01 00:00:00

  • Kinesin 3 and cytoplasmic dynein mediate interkinetic nuclear migration in neural stem cells.

    abstract::Radial glial progenitor cells exhibit bidirectional cell cycle-dependent nuclear oscillations. The purpose and underlying mechanism of this unusual 'interkinetic nuclear migration' are poorly understood. We investigated the basis for this behavior by live imaging of nuclei, centrosomes and microtubules in embryonic ra...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn.2665

    authors: Tsai JW,Lian WN,Kemal S,Kriegstein AR,Vallee RB

    更新日期:2010-12-01 00:00:00

  • Hedgehog signaling from the ZLI regulates diencephalic regional identity.

    abstract::The zona limitans intrathalamica (ZLI), a narrow compartment in the vertebrate forebrain that bisects the diencephalon transversely, expresses the secreted factor sonic hedgehog (Shh). Because genetic disruption of Shh in mouse causes severe early developmental defects, this strategy has not been useful in identifying...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn1338

    authors: Kiecker C,Lumsden A

    更新日期:2004-11-01 00:00:00

  • Cellular origins of auditory event-related potential deficits in Rett syndrome.

    abstract::Dysfunction in sensory information processing is a hallmark of many neurological disorders, including autism spectrum disorders, schizophrenia and Rett syndrome (RTT). Using mouse models of RTT, a monogenic disorder caused by mutations in MECP2, we found that the large-scale loss of MeCP2 from forebrain GABAergic inte...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn.3710

    authors: Goffin D,Brodkin ES,Blendy JA,Siegel SJ,Zhou Z

    更新日期:2014-06-01 00:00:00

  • MeCP2 and histone deacetylases 1 and 2 in dorsal striatum collectively suppress repetitive behaviors.

    abstract::Class I histone deacetylases (HDACs) Hdac1 and Hdac2 can associate together in protein complexes with transcriptional factors such as methyl-CpG-binding protein 2 (MeCP2). Given their high degree of sequence identity, we examined whether Hdac1 and Hdac2 were functionally redundant in mature mouse brain. We demonstrate...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn.4395

    authors: Mahgoub M,Adachi M,Suzuki K,Liu X,Kavalali ET,Chahrour MH,Monteggia LM

    更新日期:2016-11-01 00:00:00

  • Ultrasonic signals associated with different types of social behavior of mice.

    abstract::Communication plays an integral role in human social dynamics and is impaired in several neurodevelopmental disorders. Mice are used to study the neurobiology of social behavior; however, the extent to which mouse vocalizations influence social dynamics has remained elusive because it is difficult to identify the voca...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/s41593-020-0584-z

    authors: Sangiamo DT,Warren MR,Neunuebel JP

    更新日期:2020-03-01 00:00:00

  • Author Correction: Lipid-droplet-accumulating microglia represent a dysfunctional and proinflammatory state in the aging brain.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Nature neuroscience

    pub_type: 已发布勘误

    doi:10.1038/s41593-020-0595-9

    authors: Marschallinger J,Iram T,Zardeneta M,Lee SE,Lehallier B,Haney MS,Pluvinage JV,Mathur V,Hahn O,Morgens DW,Kim J,Tevini J,Felder TK,Wolinski H,Bertozzi CR,Bassik MC,Aigner L,Wyss-Coray T

    更新日期:2020-02-01 00:00:00

  • Human mutant huntingtin disrupts vocal learning in transgenic songbirds.

    abstract::Speech and vocal impairments characterize many neurological disorders. However, the neurogenetic mechanisms of these disorders are not well understood, and current animal models do not have the necessary circuitry to recapitulate vocal learning deficits. We developed germline transgenic songbirds, zebra finches (Tanei...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn.4133

    authors: Liu WC,Kohn J,Szwed SK,Pariser E,Sepe S,Haripal B,Oshimori N,Marsala M,Miyanohara A,Lee R

    更新日期:2015-11-01 00:00:00

  • DeepLabCut: markerless pose estimation of user-defined body parts with deep learning.

    abstract::Quantifying behavior is crucial for many applications in neuroscience. Videography provides easy methods for the observation and recording of animal behavior in diverse settings, yet extracting particular aspects of a behavior for further analysis can be highly time consuming. In motor control studies, humans or other...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/s41593-018-0209-y

    authors: Mathis A,Mamidanna P,Cury KM,Abe T,Murthy VN,Mathis MW,Bethge M

    更新日期:2018-09-01 00:00:00

  • Merlin isoform 2 in neurofibromatosis type 2-associated polyneuropathy.

    abstract::The autosomal dominant disorder neurofibromatosis type 2 (NF2) is a hereditary tumor syndrome caused by inactivation of the NF2 tumor suppressor gene, encoding merlin. Apart from tumors affecting the peripheral and central nervous systems, most NF2 patients develop peripheral neuropathies. This peripheral nerve diseas...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn.3348

    authors: Schulz A,Baader SL,Niwa-Kawakita M,Jung MJ,Bauer R,Garcia C,Zoch A,Schacke S,Hagel C,Mautner VF,Hanemann CO,Dun XP,Parkinson DB,Weis J,Schröder JM,Gutmann DH,Giovannini M,Morrison H

    更新日期:2013-04-01 00:00:00

  • Acute changes in short-term plasticity at synapses with elevated levels of neuronal calcium sensor-1.

    abstract::Short-term synaptic plasticity is a defining feature of neuronal activity, but the underlying molecular mechanisms are poorly understood. Depression of synaptic activity might be due to limited vesicle availability, whereas facilitation is thought to result from elevated calcium levels. However, it is unclear whether ...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn1117

    authors: Sippy T,Cruz-Martín A,Jeromin A,Schweizer FE

    更新日期:2003-10-01 00:00:00

  • Stress resilience is promoted by a Zfp189-driven transcriptional network in prefrontal cortex.

    abstract::Understanding the transcriptional changes that are engaged in stress resilience may reveal novel antidepressant targets. Here we use gene co-expression analysis of RNA-sequencing data from brains of resilient mice to identify a gene network that is unique to resilience. Zfp189, which encodes a previously unstudied zin...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/s41593-019-0462-8

    authors: Lorsch ZS,Hamilton PJ,Ramakrishnan A,Parise EM,Salery M,Wright WJ,Lepack AE,Mews P,Issler O,McKenzie A,Zhou X,Parise LF,Pirpinias ST,Ortiz Torres I,Kronman HG,Montgomery SE,Loh YE,Labonté B,Conkey A,Symonds AE,Nev

    更新日期:2019-09-01 00:00:00

  • Modeling behaviorally relevant neural dynamics enabled by preferential subspace identification.

    abstract::Neural activity exhibits complex dynamics related to various brain functions, internal states and behaviors. Understanding how neural dynamics explain specific measured behaviors requires dissociating behaviorally relevant and irrelevant dynamics, which is not achieved with current neural dynamic models as they are le...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/s41593-020-00733-0

    authors: Sani OG,Abbaspourazad H,Wong YT,Pesaran B,Shanechi MM

    更新日期:2021-01-01 00:00:00

  • Octopamine fuels fighting flies.

    abstract::The neural basis of aggression is poorly understood. A study in this issue used genetic scalpels to dissect the circuitry of the fly brain and identified a small cluster of octopaminergic neurons that can make a fly fighting mad. ...

    journal_title:Nature neuroscience

    pub_type: 评论,杂志文章,评审

    doi:10.1038/nn0908-989

    authors: Potter CJ,Luo L

    更新日期:2008-09-01 00:00:00

  • Synaptic activation of AMPA receptors inhibits GABA release from cerebellar interneurons.

    abstract::A single neurotransmitter elicits diverse physiological responses through activation of multiple receptor subtypes and/or heterosynaptic interactions involving distinct synaptic targets. We found that a typical excitatory transmitter released from the climbing fiber (CF) in the cerebellar cortex not only excited Purki...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/75718

    authors: Satake S,Saitow F,Yamada J,Konishi S

    更新日期:2000-06-01 00:00:00

  • Integration of surface information in primary visual cortex.

    abstract::Ample evidence suggests that primary visual cortex is involved in the perception of form, and there is increasing evidence that it may also be important in the perception of surfaces. Perceptual qualities of surfaces, such as brightness, are based on extensive integration of information throughout the visual field. In...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/2849

    authors: MacEvoy SP,Kim W,Paradiso MA

    更新日期:1998-11-01 00:00:00

  • Molecular drivers and cortical spread of lateral entorhinal cortex dysfunction in preclinical Alzheimer's disease.

    abstract::The entorhinal cortex has been implicated in the early stages of Alzheimer's disease, which is characterized by changes in the tau protein and in the cleaved fragments of the amyloid precursor protein (APP). We used a high-resolution functional magnetic resonance imaging (fMRI) variant that can map metabolic defects i...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/nn.3606

    authors: Khan UA,Liu L,Provenzano FA,Berman DE,Profaci CP,Sloan R,Mayeux R,Duff KE,Small SA

    更新日期:2014-02-01 00:00:00

  • A sugar transporter as a candidate for the outer hair cell motor.

    abstract::Forces developed by cochlear outer hair cells (OHCs) are responsible for the sharp tuning that underlies sensitivity and frequency selectivity in the ear. OHCs exhibit a voltage-dependent motility involving a 'motor' protein embedded in the basolateral membrane. The motor has so far resisted molecular identification. ...

    journal_title:Nature neuroscience

    pub_type: 杂志文章

    doi:10.1038/11174

    authors: Géléoc GS,Casalotti SO,Forge A,Ashmore JF

    更新日期:1999-08-01 00:00:00