Mapping of quantitative trait loci for clinical-chemical traits in swine.

abstract：:Many genomic methodologies rely on the presence and extent of linkage disequilibrium (LD) between markers and genetic variants underlying traits of interest, but the extent of LD in the horse has yet to be comprehensively characterized. In this study, we evaluate the extent and decay of LD in a sample of 817 Thoroughb...

journal_title：Animal genetics

authors： Corbin LJ,Blott SC,Swinburne JE,Vaudin M,Bishop SC,Woolliams JA

更新日期：2010-12-01 00:00:00

abstract：:Equine mitochondrial DNA (mtDNA) phylogeny reconstruction reveals a complex pattern of variation unlike that seen in other large domesticates. It is likely that this pattern reflects a process of multiple and repeated, although not necessarily independent, domestication events. Until now, no clear geographic affiliati...

journal_title：Animal genetics

authors： McGahern A,Bower MA,Edwards CJ,Brophy PO,Sulimova G,Zakharov I,Vizuete-Forster M,Levine M,Li S,MacHugh DE,Hill EW

更新日期：2006-10-01 00:00:00

abstract：:Based on pairwise identity-by-state (IBS) distances and whole-genome SNP data, kinship was investigated in the Israeli Holstein population. A total of 789 bulls, including most of the artificial insemination sires in service since 1987, were genotyped by the BovineSNP50 BeadChip. This sample included up to five genera...

journal_title：Animal genetics

authors： Seroussi E,Glick G,Shirak A,Ezra E,Zeron Y,Ron M,Weller JI

更新日期：2013-12-01 00:00:00

abstract：:Major histocompatibility complex (MHC) class IV haplotypes were identified in a population of meat-type chickens by restriction fragment length polymorphism (RFLP) analysis. Fourteen different haplotypes were designated on the basis of restriction patterns obtained from Southern blots of PvuII- or BglII-digested DNA, ...

journal_title：Animal genetics

authors： Landesman E,Uni Z,Heller ED

更新日期：1993-10-01 00:00:00

abstract：:We describe a polymorphism in the bovine gene PTHG which can be readily typed by PCR assay. The polymorphism is codominantly inherited and the allele frequencies appear characteristic of Bo indicus and B. taurus cattle. ...

journal_title：Animal genetics

authors： Agaba M,Kemp SJ

更新日期：1993-08-01 00:00:00

abstract：:We have examined whether black/yellow coat colour in Labrador retrievers is controlled by allelic variants at the extension locus. As the gene encoding the melanocyte-stimulating hormone receptor (MC1R) has been shown to correspond to the extension locus in several species, we have determined the genomic MC1R sequence...

journal_title：Animal genetics

authors： Everts RE,Rothuizen J,van Oost BA

更新日期：2000-06-01 00:00:00

abstract：:Diagnostic criteria should be carefully defined and described in disease association studies to allow (1) comparison among studies from different laboratories evaluating the same disease, (2) critical evaluation of selection procedures of patients, and (3) to strengthen genuine associations with any genetic marker sys...

journal_title：Animal genetics

authors： McClure JJ

更新日期：1988-01-01 00:00:00

abstract：:The ovine NRAMP1 and cervine NRAMP1 cDNAs were cloned by RT PCR of RNA derived from macrophage enriched leukocyte preparations. The complete coding and 3' regions were sequenced. Both sheep and deer NRAMP1 proteins are 548 amino acids long. There are 77 and 73 amino acid differences, respectively, compared to the mous...

journal_title：Animal genetics

authors： Matthews GD,Crawford AM

更新日期：1998-02-01 00:00:00

abstract：:Primer sequences flanking 13 microsatellite loci isolated from the domestic horse (E. caballus) were successfully used to amplify homologous loci in the Przewalski's horse (E. przewalskii). The results demonstrate that the level of polymorphism at all 13 loci in the Przewalski's horse was comparable to that in the dom...

journal_title：Animal genetics

authors： Breen M,Downs P,Irvin Z,Bell K

更新日期：1994-12-01 00:00:00

abstract：:Three genomic clones were isolated from a size-selected pig DNA library by hybridization with a DNA-fingerprint probe. Analysis at the sequence level revealed that all three clones contain interrupted stretches of triplet repeats mainly composed of CAC and CAT triplets. Evaluation of the corresponding loci for polymor...

journal_title：Animal genetics

authors： Coppieters W,Van de Weghe A,Depicker A,Coppieters J,Peelman L,Van Zeveren A,Bouquet Y

更新日期：1995-10-01 00:00:00

abstract：:Economically important reproduction traits in sheep, such as number of lambs weaned and litter size, are expressed only in females and later in life after most selection decisions are made, which makes them ideal candidates for genomic selection. Accurate genomic predictions would lead to greater genetic gain for thes...

journal_title：Animal genetics

authors： Bolormaa S,Brown DJ,Swan AA,van der Werf JHJ,Hayes BJ,Daetwyler HD

更新日期：2017-06-01 00:00:00

abstract：:Supernumerary teats represent a common abnormality of the bovine udder. A genome-wide association study was performed based on the proportion of the occurrence of supernumerary teats in the daughters of 1097 Holstein bulls. The heritability of caudal supernumerary teats without mammary gland in this study was 0.604. T...

journal_title：Animal genetics

authors： Joerg H,Meili C,Ruprecht O,Bangerter E,Burren A,Bigler A

更新日期：2014-12-01 00:00:00

abstract：:A map of the ovine MHC class II DQ subregion has been constructed from overlapping cosmid clones. This region consists of two loci linked on a linear tract of 130 kb DNA. Each locus consists of a DQA and a DQB gene in a tail-to-tail orientation. The genes in each locus are transcribed but only those designated DQ1 exp...

journal_title：Animal genetics

authors： Wright H,Ballingall KT

更新日期：1994-08-01 00:00:00

abstract：:The aim of the study was to investigate quantitative trait loci (QTL) in previously identified regions of chicken chromosomes 1, 4 and 5 relating to 40-day body weights and conformation scores. Half-sib (HS) and variance component analyses were implemented and compared using QTL Express software. Data were from a two-...

journal_title：Animal genetics

authors： Rowe SJ,Windsor D,Haley CS,Burt DW,Hocking PM,Griffin H,Vincent J,De Koning DJ

更新日期：2006-06-01 00:00:00

abstract：:Genomic selection is becoming a standard tool in livestock breeding programs, particularly for traits that are hard to measure. Accuracy of genomic selection can be improved by increasing the quantity and quality of data and potentially by improving analytical methods. Adding genotypes and phenotypes from additional b...

journal_title：Animal genetics

authors： Farah MM,Swan AA,Fortes MR,Fonseca R,Moore SS,Kelly MJ

更新日期：2016-02-01 00:00:00

abstract：:Understanding the genetic basis of variation in traits related to growth and fillet quality in Atlantic salmon is of importance to the aquaculture industry. Several growth-related QTL have been identified via the application of genetic markers. The IGF1 gene is considered a highly conserved and crucial growth-regulati...

journal_title：Animal genetics

authors： Tsai HY,Hamilton A,Guy DR,Houston RD

更新日期：2014-10-01 00:00:00

abstract：:Vertebrate whole genome sequence assembly can benefit from a priori knowledge of variability in the target genome, with researchers often selecting highly inbred individuals for sequencing. However, for most species highly inbred research lines are lacking, requiring the use of an outbred individual(s). Here we examin...

journal_title：Animal genetics

authors： Chaves LD,Harry DE,Reed KM

更新日期：2009-06-01 00:00:00

abstract：:The European sea bass (Dicentrarchus labrax L.) is a marine fish of key economic and cultural importance in Europe. It is now more an aquaculture than a fisheries species (>96% of the production in 2016), although modern rearing techniques date back only from the late 1980s. It also has high interest for evolutionary ...

journal_title：Animal genetics

authors： Vandeputte M,Gagnaire PA,Allal F

更新日期：2019-06-01 00:00:00

abstract：:Restriction site heteroplasmy involving the enzymes NcoI and XbaI was detected in the mitochondrial DNAs of two individuals of the marine fish Sciaenops ocellatus. This represents only the sixth documented example of mitochondrial DNA restriction site heteroplasmy in animals. Two heteroplasmic individuals were found i...

journal_title：Animal genetics

authors： Gold JR,Richardson LR

更新日期：1990-01-01 00:00:00

abstract：:The 70 kilodalton heat shock proteins (Hsp70) are highly conserved molecular chaperones which have a crucial role in the stress response of the cell. In mammals, the Hsp70 proteins are encoded by a cluster of three genes: HSPA1A, HSPA1B and HSPA1L. In bovines, this cluster is located on chromosome 23 downstream of the...

journal_title：Animal genetics

authors： Suqueli García MF,Castellote MA,Feingold SE,Corva PM

更新日期：2017-08-01 00:00:00

abstract：:Data were available for 12 poultry microsatellites and 29 poultry single nucleotide polymorphisms (SNPs), and for 34 cattle microsatellites and 36 cattle SNPs. Stochastic permutation was used to determine the number of SNPs needed to obtain the same average information content as a given number of microsatellites. For...

journal_title：Animal genetics

authors： Schopen GC,Bovenhuis H,Visker MH,van Arendonk JA

更新日期：2008-08-01 00:00:00

abstract：:We have previously identified and mapped porcine expressed sequence tags (ESTs) derived from genes that are preferentially expressed in liver. The aim of the present study was to identify single nucleotide polymorphisms (SNPs) in porcine genes encoding enzymes in hepatic metabolic pathways and use the SNPs for mapping...

journal_title：Animal genetics

authors： Ponsuksili S,Chomdej S,Murani E,Bläser U,Schreinemachers HJ,Schellander K,Wimmers K

更新日期：2005-12-01 00:00:00

abstract：:The Icelandic horse is a breed known mainly for its ability to perform the ambling four-beat gait 'tölt' and the lateral two-beat gait pace. The natural ability of the breed to perform these alternative gaits is highly desired by breeders. Therefore, the discovery that a nonsense mutation (C>A) in the DMRT3 gene was t...

journal_title：Animal genetics

authors： Jäderkvist Fegraeus K,Hirschberg I,Árnason T,Andersson L,Velie BD,Andersson LS,Lindgren G

更新日期：2017-12-01 00:00:00

abstract：:Broken and cracked eggshells contribute significantly to economic losses in the egg production industry. We previously identified ovocalyxin-32 as a potential gene influencing eggshell traits, by analysing an intercross between two parent lines developed from the same founder population by a two-way selection for eggs...

journal_title：Animal genetics

authors： Takahashi H,Sasaki O,Nirasawa K,Furukawa T

更新日期：2010-10-01 00:00:00

abstract：:The objective of this study was to identify twinning rate quantitative trait loci (QTL) by typing pooled samples in a preliminary screening followed by interval mapping to test QTL effects. Four elite North American Holstein half-sib sire families with high twinning rate predicted transmitting abilities (PTA) were use...

journal_title：Animal genetics

authors： Cobanoglu O,Berger PJ,Kirkpatrick BW

更新日期：2005-08-01 00:00:00

abstract：:Animals were identified from two sire lines as being homozygous for the class I bovine lymphocyte antigen (BoLA-A) w23. These animals were also shown to be homozygous for class II antigens (BoLA-D) which, however, differed between the two sire lines. Lymphocytes from these animals were then used either as stimulator c...

journal_title：Animal genetics

authors： Rothel JS,Dufty JH,Wood PR

更新日期：1990-01-01 00:00:00

abstract：:The distribution of biochemical genetic variants was examined among eight inbred strains of mice, which served as contributors to a heterogeneous stock of mice (HS), and in short-sleep (SS) and long-sleep (LS) mice, selectively bred from the HS stock for differential ethanol sensitivity. Fifteen loci for enzymes of al...

journal_title：Animal genetics

authors： Holmes RS,Petersen DR,Deitrich RA

更新日期：1986-01-01 00:00:00

abstract：:In this study, a proposal is presented for the allele nomenclature of 17 polymorphic STR loci (AHT4, AHT5, ASB2, ASB17, ASB23, CA425, HMS1, HMS2, HMS3, HMS6, HMS7, HTG4, HTG6, HTG7, HTG10, LEX3 and VHL20) for equine genotyping (Equus caballus). The nomenclature is based on sequence data of the polymorphic region of th...

journal_title：Animal genetics

authors： van de Goor LH,Panneman H,van Haeringen WA

更新日期：2010-04-01 00:00:00

abstract：:The stearoyl-CoA desaturase (delta-9-desaturase) gene encodes a key enzyme in the cellular biosynthesis of monounsaturated fatty acids. In our initial genome-wide association study (GWAS) of Chinese Holstein cows, 19 SNPs fell in a 1.8-Mb region (20.3-22.1 Mb) on chromosome 26 underlying the SCD gene and were highly s...

journal_title：Animal genetics

authors： Li C,Sun D,Zhang S,Liu L,Alim MA,Zhang Q

更新日期：2016-08-01 00:00:00

abstract：:In this study, we analyzed 93 whole genomes from Chinese spot-billed ducks (CSB), meat-type ducks (MET), and egg and dual purpose-type ducks (EDT) to characterize the genetic material flowing between the CSB and modern ducks. Using a frequency of shared identical-by-descent method, approximately 10.9 Mb introgression ...

journal_title：Animal genetics

authors： Guo X,Wang ZC,Wang S,Li HF,Suwannapoom C,Wang JX,Zhang C,Shao Y,Wang MS,Jiang RS

更新日期：2020-12-01 00:00:00