Abstract:
:We present the first radiation hybrid (RH) map of river buffalo (Bubalus bubalis) chromosome 6 (BBU6) developed with a recently constructed river buffalo whole-genome RH panel (BBURH(5000)). The preliminary map contains 33 cattle-derived markers, including 12 microsatellites, 19 coding genes and two ESTs, distributed across two linkage groups. Retention frequencies for markers ranged from 14.4% to 40.0%. Most of the marker orders within the linkage groups on BBU6 were consistent with the cattle genome sequence and RH maps. This preliminary RH map is the starting point for comparing gene order between river buffalo and cattle, presenting an opportunity for the examination of micro-rearrangements of these chromosomes. Also, resources for positional candidate cloning in river buffalo are enhanced.
journal_name
Anim Genetjournal_title
Animal geneticsauthors
Stafuzza NB,Ianella P,Miziara MN,Agarwala R,Schäffer AA,Riggs PK,Womack JE,Amaral MEdoi
10.1111/j.1365-2052.2007.01612.xsubject
Has Abstractpub_date
2007-08-01 00:00:00pages
406-9issue
4eissn
0268-9146issn
1365-2052pii
AGE1612journal_volume
38pub_type
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