Model weights and the foundations of multimodel inference.

Abstract:

:Statistical thinking in wildlife biology and ecology has been profoundly influenced by the introduction of AIC (Akaike's information criterion) as a tool for model selection and as a basis for model averaging. In this paper, we advocate the Bayesian paradigm as a broader framework for multimodel inference, one in which model averaging and model selection are naturally linked, and in which the performance of AIC-based tools is naturally evaluated. Prior model weights implicitly associated with the use of AIC are seen to highly favor complex models: in some cases, all but the most highly parameterized models in the model set are virtually ignored a priori. We suggest the usefulness of the weighted BIC (Bayesian information criterion) as a computationally simple alternative to AIC, based on explicit selection of prior model probabilities rather than acceptance of default priors associated with AIC. We note, however, that both procedures are only approximate to the use of exact Bayes factors. We discuss and illustrate technical difficulties associated with Bayes factors, and suggest approaches to avoiding these difficulties in the context of model selection for a logistic regression. Our example highlights the predisposition of AIC weighting to favor complex models and suggests a need for caution in using the BIC for computing approximate posterior model weights.

journal_name

Ecology

journal_title

Ecology

authors

Link WA,Barker RJ

doi

10.1890/0012-9658(2006)87[2626:mwatfo]2.0.co;2

subject

Has Abstract

pub_date

2006-10-01 00:00:00

pages

2626-35

issue

10

eissn

0012-9658

issn

1939-9170

journal_volume

87

pub_type

杂志文章

相关文献

ECOLOGY文献大全
  • Habitat availability drives the distribution-abundance relationship in phytophagous true bugs in managed grasslands.

    abstract::The nearly universal positive relationship between the distribution and abundance of species has been explained by several hypotheses but hitherto no consensus has been reached. Here, we used monitoring data of 105 phytophagous true bug species (Heteroptera) from 150 grassland sites over six years to test how (1) rang...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1002/ecy.1947

    authors: Friess N,Gossner MM,Weisser WW,Brandl R,Brändle M

    更新日期:2017-10-01 00:00:00

  • The role of ecotypic variation and the environment on biomass and nitrogen in a dominant prairie grass.

    abstract::Knowledge of the relative strength of evolution and the environment on a phenotype is required to predict species responses to environmental change and decide where to source plant material for ecological restoration. This information is critically needed for dominant species that largely determine the productivity of...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/14-1492.1

    authors: Mendola ML,Baer SG,Johnson LC,Maricle BR

    更新日期:2015-09-01 00:00:00

  • Unity through nonlinearity: a unimodal coral-nutrient interaction.

    abstract::The magnitude and direction of biological effects of environmental disturbances can vary considerably, especially among studies that use presence/absence manipulations. Because nonlinearities (e.g., humped relationships) are common in biological systems, this heterogeneity in effects may arise if systems are similar i...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/12-1697.1

    authors: Gil MA

    更新日期:2013-08-01 00:00:00

  • The promise and peril of intensive-site-based ecological research: insights from the Hubbard Brook ecosystem study.

    abstract::Ecological research is increasingly concentrated at particular locations or sites. This trend reflects a variety of advantages of intensive, site-based research, but also raises important questions about the nature of such spatially delimited research: how well does site based research represent broader areas, and doe...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/14-1043.1

    authors: Fahey TJ,Templer PH,Anderson BT,Battles JJ,Campbell JL,Driscoll CT,Fusco AR,Green MB,Kassam KA,Rodenhouse NL,Rustad L,Schaberg PG,Vadeboncoeur MA

    更新日期:2015-04-01 00:00:00

  • Do resources or natural enemies drive bee population dynamics in fragmented habitats?

    abstract::The relative importance of bottom-up or top-down forces has been mainly studied for herbivores but rarely for pollinators. Habitat fragmentation might change driving forces of population dynamics by reducing the area of resource-providing habitats, disrupting habitat connectivity, and affecting natural enemies more th...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/06-1323.1

    authors: Steffan-Dewenter I,Schiele S

    更新日期:2008-05-01 00:00:00

  • Experimental evaluation of predation as a facilitator of invasion success in a stream fish.

    abstract::Predator-prey relationships in poikilotherms are often size dependent, such as when adults of two interacting species are capable of eating juveniles of the other species. Such bi-directional predation can be important during the establishment and spread of an invading species, but its role remains poorly understood. ...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/12-0803.1

    authors: Fraser DF,Lamphere BA

    更新日期:2013-03-01 00:00:00

  • Small genome separates native and invasive populations in an ecologically important cosmopolitan grass.

    abstract::The literature suggests that small genomes promote invasion in plants, but little is known about the interaction of genome size with other traits or about the role of genome size during different phases of the invasion process. By intercontinental comparison of native and invasive populations of the common reed Phragm...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1002/ecy.2068

    authors: Pyšek P,Skálová H,Čuda J,Guo WY,Suda J,Doležal J,Kauzál O,Lambertini C,Lučanová M,Mandáková T,Moravcová L,Pyšková K,Brix H,Meyerson LA

    更新日期:2018-01-01 00:00:00

  • A practical guide for combining data to model species distributions.

    abstract::Understanding and accurately modeling species distributions lies at the heart of many problems in ecology, evolution, and conservation. Multiple sources of data are increasingly available for modeling species distributions, such as data from citizen science programs, atlases, museums, and planned surveys. Yet reliably...

    journal_title:Ecology

    pub_type: 杂志文章,评审

    doi:10.1002/ecy.2710

    authors: Fletcher RJ Jr,Hefley TJ,Robertson EP,Zuckerberg B,McCleery RA,Dorazio RM

    更新日期:2019-06-01 00:00:00

  • Filling in the gaps in survival analysis: using field data to infer plant responses to environmental stressors.

    abstract::Elucidating how organismal survival depends on the environment is a core component of ecological and evolutionary research. To reconcile high-frequency covariates with lower-frequency demographic censuses, many statistical tools involve aggregating environmental conditions over long periods, potentially obscuring the ...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1002/ecy.2778

    authors: Tomasek BJ,Burghardt LT,Shriver RK

    更新日期:2019-10-01 00:00:00

  • Caspian Sea environmental variables: an extension of the Bio-ORACLE ocean data set.

    abstract::The Caspian Sea hosts unique native and endemic faunas. However, it is also a source and sink of invasive alien species (IAS), with some listed among the worst 100 invasive species by the IUCN. A common approach to study biodiversity and biogeographic patterns or to predict the invasive potential of species is the app...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1002/ecy.3076

    authors: Lattuada M,Wilke T,Raes N

    更新日期:2020-09-01 00:00:00

  • Confirmatory path analysis in a generalized multilevel context.

    abstract::This paper describes how to test, and potentially falsify, a multivariate causal hypothesis involving only observed variables (i.e., a path analysis) when the data have a hierarchical or multilevel structure, when different variables are potentially defined at different levels of such a hierarchy, and when different v...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/08-1034.1

    authors: Shipley B

    更新日期:2009-02-01 00:00:00

  • Soil drivers of local-scale tree growth in a lowland tropical forest.

    abstract::Soil nutrients influence the distribution of tree species in lowland tropical forests, but their effect on productivity, especially at local scales, remains unclear. We used tree census, canopy occupancy, and soil data from the Barro Colorado Island (BCI; Panama) 50-ha forest dynamics plot to investigate the influence...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1002/ecy.2532

    authors: Zemunik G,Davies SJ,Turner BL

    更新日期:2018-12-01 00:00:00

  • Habitat heterogeneity and activity of an omnivorous ecosystem engineer control stream community dynamics.

    abstract::All communities vary through time. This variability originates from both intrinsic and extrinsic sources. Intrinsic sources are due to actions of organisms in a community, i.e., population dynamics and species interactions, while extrinsic variability is variability created by elements of habitat or environmental chan...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/09-0350.1

    authors: Brown BL,Lawson RL

    更新日期:2010-06-01 00:00:00

  • Tropical herbivorous phasmids, but not litter snails, alter decomposition rates by modifying litter bacteria.

    abstract::Consumers can alter decomposition rates through both feces and selective feeding in many ecosystems, but these combined effects have seldom been examined in tropical ecosystems. Members of the detrital food web (litter-feeders or microbivores) should presumably have greater effects on decomposition than herbivores, me...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1002/ecy.2169

    authors: Prather CM,Belovsky GE,Cantrell SA,González G

    更新日期:2018-04-01 00:00:00

  • The problem and promise of scale dependency in community phylogenetics.

    abstract::The problem of scale dependency is widespread in investigations of ecological communities. Null model investigations of community assembly exemplify the challenges involved because they typically include subjectively defined "regional species pools." The burgeoning field of community phylogenetics appears poised to fa...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/0012-9658(2006)87[2418:tpapos]2.0.co;2

    authors: Swenson NG,Enquist BJ,Pither J,Thompson J,Zimmerman JK

    更新日期:2006-10-01 00:00:00

  • Facilitation by Pinus flexilis during succession: a hierarchy of mechanisms benefits other plant species.

    abstract::Studies of facilitation have primarily been limited to single mechanisms, species, or environments. We examined interacting mechanisms governing the facilitative effects of Pinus flexilis on two later successional understory species, Pseudotsuga menziesii and Ribes cereum, in different microhabitats and seasons at the...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/0012-9658(2006)87[1816:fbpfds]2.0.co;2

    authors: Baumeister D,Callaway RM

    更新日期:2006-07-01 00:00:00

  • Match/mismatch between the Mytilus edulis larval supply and seston quality: effect on recruitment.

    abstract::We considered Cushing's match/mismatch theory in a heterotrophic environment and hypothesized that settlement and recruitment success in blue mussel are higher when the food supply is rich in polyunsaturated and essential fatty acids (PUFA/EFA). To test this hypothesis, we monitored larval development as well as fatty...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/11-1292.1

    authors: Toupoint N,Gilmore-Solomon L,Bourque F,Myrand B,Pernet F,Olivier F,Tremblay R

    更新日期:2012-08-01 00:00:00

  • Geomorphology controls the trophic base of stream food webs in a boreal watershed .

    abstract::Abstract. Physical attributes of rivers control the quantity and quality of energy sources available to consumers, but it remains untested whether geomorphic conditions of whole watersheds affect the assimilation of different resources by stream organisms. We compared the fatty acid (FA) compositions of two invertebra...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/14-2247.1

    authors: Smits AP,Schindler DE,Brett MT

    更新日期:2015-07-01 00:00:00

  • Individual heterogeneity in studies on marked animals using numerical integration: capture-recapture mixed models.

    abstract::In conservation and evolutionary ecology, quantifying and accounting for individual heterogeneity in vital rates of open populations is of particular interest. Individual random effects have been used in capture-recapture models, adopting a Bayesian framework with Markov chain Monte Carlo (MCMC) to carry out estimatio...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/09-1903.1

    authors: Gimenez O,Choquet R

    更新日期:2010-04-01 00:00:00

  • Sampling variability and estimates of density dependence: a composite-likelihood approach.

    abstract::It is well known that sampling variability, if not properly taken into account, affects various ecologically important analyses. Statistical inference for stochastic population dynamics models is difficult when, in addition to the process error, there is also sampling error. The standard maximum-likelihood approach su...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/04-1655

    authors: Lele SR

    更新日期:2006-01-01 00:00:00

  • Allometric exponents do not support a universal metabolic allometry.

    abstract::The debate about the value of the allometric scaling exponent (b) relating metabolic rate to body mass (metabolic rate = a x mass(b)) is ongoing, with published evidence both for and against a 3/4-power scaling law continuing to accumulate. However, this debate often revolves around a dichotomous distinction between t...

    journal_title:Ecology

    pub_type: 杂志文章,meta分析

    doi:10.1890/05-1883

    authors: White CR,Cassey P,Blackburn TM

    更新日期:2007-02-01 00:00:00

  • Drought sensitivity of an N2 -fixing tree may slow temperate deciduous forest recovery from disturbance.

    abstract::Increased drought intensity and frequency due to climate change may reduce the abundance and activity of nitrogen (N2 )-fixing plants, which supply new N to terrestrial ecosystems. As a result, drought may indirectly reduce ecosystem productivity through its effect on the N cycle. Here, we manipulated growing season n...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1002/ecy.2862

    authors: Minucci JM,Miniat CF,Wurzburger N

    更新日期:2019-12-01 00:00:00

  • Surf-zone hydrodynamics alter phytoplankton subsidies affecting reproductive output and growth of tidal filter feeders.

    abstract::Surf zones, classified from reflective to dissipative, separate the ocean from shore and subsidies from the coastal ocean must pass through surf zones to reach the shore. We have observed that variations in phytoplankton concentrations in the water over the intertidal zone varied with surf-zone hydrodynamics and we hy...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1002/ecy.2415

    authors: Salant CD,Shanks AL

    更新日期:2018-08-01 00:00:00

  • Water availability directly determines per capita consumption at two trophic levels.

    abstract::Community ecology has long focused on energy and nutrients as currencies of species interactions. Evidence from physiological ecology and recent studies suggest that in terrestrial systems, water may influence animal behavior and global patterns of species richness. Despite these observations, water has received littl...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/08-1626.1

    authors: McCluney KE,Sabo JL

    更新日期:2009-06-01 00:00:00

  • Allometric scaling predicts preferences for burned patches in a guild of East African grazers.

    abstract::The high herbivore diversity in savanna systems has been attributed to the inherent spatial and temporal heterogeneity related to the quantity and quality of food resources. Allometric scaling predicts that smaller-bodied grazers rely on higher quality forage than larger-bodied grazers. We replicated burns at varying ...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/09-1673.1

    authors: Sensenig RL,Demment MW,Laca EA

    更新日期:2010-10-01 00:00:00

  • Landscape connectivity explains interaction network patterns at multiple scales.

    abstract::Under a metacommunity framework, the spatial configuration of habitat fragments could determine local community structure. Yet, quantifying fragment connectivity is challenging, as it depends on multiple variables at several geographical scales. We assessed the extent to which fragment connectivity and area explain pa...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1002/ecy.2883

    authors: Santos M,Cagnolo L,Roslin T,Marrero HJ,Vázquez DP

    更新日期:2019-11-01 00:00:00

  • Broad shifts in the resource use of a commercially harvested fish following the invasion of dreissenid mussels.

    abstract::Dreissenid mussels, including the zebra (Dreissena polymorpha) and quagga (Dreissena rostiformus bugensis) mussel, are invasive species known for their capacity to act as ecosystem engineers. They have caused significant changes in the many freshwater systems they have invaded by increasing water clarity, reducing pri...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1002/ecy.1836

    authors: Fera SA,Rennie MD,Dunlop ES

    更新日期:2017-06-01 00:00:00

  • Distance-dependent effect of the nearest neighbor: spatiotemporal patterns in brown bear reproduction.

    abstract::In mammals, reproductive synchrony and reproductive suppression usually are found in social, group-living species, which often display hierarchical relationships among related animals. Some individuals, particularly younger, philopatric females beyond the age of sexual maturity, may not raise offspring because they ar...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/07-1921.1

    authors: Ordiz A,Støen OG,Swenson JE,Kojola I,Bischof R

    更新日期:2008-12-01 00:00:00

  • Allocation trade-offs dominate the response of tropical forest growth to seasonal and interannual drought.

    abstract::What determines the seasonal and interannual variation of growth rates in trees in a tropical forest? We explore this question with a novel four-year high-temporal-resolution data set of carbon allocation from two forest plots in the Bolivian Amazon. The forests show strong seasonal variation in tree wood growth rates...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/13-1507.1

    authors: Doughty CE,Malhi Y,Araujo-Murakami A,Metcalfe DB,Silva-Espejo JE,Arroyo L,Heredia JP,Pardo-Toledo E,Mendizabal LM,Rojas-Landivar VD,Vega-Martinez M,Flores-Valencia M,Sibler-Rivero R,Moreno-Vare L,Viscarra LJ,Chuviru-Castro

    更新日期:2014-08-01 00:00:00

  • Farmland biodiversity and agricultural management on 237 farms in 13 European and two African regions.

    abstract::Farmland is a major land cover type in Europe and Africa and provides habitat for numerous species. The severe decline in farmland biodiversity of the last decades has been attributed to changes in farming practices, and organic and low-input farming are assumed to mitigate detrimental effects of agricultural intensif...

    journal_title:Ecology

    pub_type: 杂志文章

    doi:10.1890/15-1985.1

    authors: Lüscher G,Ammari Y,Andriets A,Angelova S,Arndorfer M,Bailey D,Balázs K,Bogers M,Bunce RG,Choisis JP,Dennis P,Díaz M,Dyman T,Eiter S,Fjellstad W,Fraser M,Friedel JK,Garchi S,Geijzendorffer IR,Gomiero T,González-Bor

    更新日期:2016-06-01 00:00:00