Maintaining rapid growth in moderate-density Escherichia coli fermentations.

Abstract:

:A novel feeding strategy that prolongs rapid growth rates for Escherichia coli fermentations to moderately high cell density is presented. High-density fermentations are a common and successful means of producing biological products. However, acetate accumulation can be a substantial problem in these procedures. To avoid this problem, many feeding strategies and host modifications have been developed, but all result in relatively low growth rates. If a faster growth rate could be maintained, the growth phase of the process would be shortened, leading to increased productivity. It is also possible that the subsequent specific production rate could be enhanced by growing the early culture at a faster rate. We have developed a procedure to enable rapid growth to a cell density of 20 g/L and have used cell-free protein synthesis to evaluate the relative potential of the resulting cells for producing recombinant proteins. The method uses glucose pulses and the duration of the dissolved oxygen response to calculate the appropriate glucose feed rate based on the glucose demand of the culture. Amino acids and vitamins were supplied in the medium to increase the growth rate. We were able to sustain a growth rate of 0.8/h up to 20 g/L dry cell weight without significant acetate accumulation. Analysis of amino acid consumption indicates that cell composition is an accurate predictor of amino acid demand for most amino acids. Cell-free protein synthesis was used to compare the protein production potential of the high-density cultures with that of cells grown in complex medium and harvested at low cell density and maximum growth rate. Protein production for the extract from the controlled, high-density fermentations was 950 mg/L compared with 860 mg/L for the low-density control. Therefore, the new control procedure has promising potential for developing rapid and productive industrial fermentations.

journal_name

Biotechnol Bioeng

authors

Zawada J,Swartz J

doi

10.1002/bit.20369

subject

Has Abstract

pub_date

2005-02-20 00:00:00

pages

407-15

issue

4

eissn

0006-3592

issn

1097-0290

journal_volume

89

pub_type

杂志文章
  • Biosorption of lead and nickel by biomass of marine algae.

    abstract::Screening tests of different marine algae biomas types revealed a high passive biosorptive uptake of lead up to 270 mg Pb/g of biomass in some brown marine algae. Members of the order Fucales perfomed particularly well in this descending sequence: Fucus > Ascophyllum > Sargassum. Although decreasing the swelling of we...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260431102

    authors: Holan ZR,Volesky B

    更新日期:1994-05-01 00:00:00

  • Fabricating PLGA microparticles with high loads of the small molecule antioxidant N-acetylcysteine that rescue oligodendrocyte progenitor cells from oxidative stress.

    abstract::Reactive oxygen species (ROS), encompassing all oxygen radical or non-radical oxidizing agents, play key roles in disease progression. Controlled delivery of antioxidants is therapeutically relevant in such oxidant-stressed environments. Encapsulating small hydrophilic molecules into hydrophobic polymer microparticles...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.26443

    authors: Murphy NP,Lampe KJ

    更新日期:2018-01-01 00:00:00

  • A novel purification strategy for retrovirus gene therapy vectors using heparin affinity chromatography.

    abstract::Membrane separation and chromatographic technologies are regarded as an attractive alternative to conventional academic small-scale ultracentrifugation procedures used for retrovirus purification. However, despite the increasing demands for purified retroviral vector preparations, new chromatography adsorbents with hi...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.20301

    authors: Segura MM,Kamen A,Trudel P,Garnier A

    更新日期:2005-05-20 00:00:00

  • Investigation of the porous structure of cellulosic substrates through confocal laser scanning microscopy.

    abstract::At the most fundamental level, saccharification occurs when cell wall degrading enzymes (CWDEs) diffuse, bind to and react on readily accessible cellulose fibrils. Thus, the study of the diffusive behavior of solutes into and out of cellulosic substrates is important for understanding how biomass pore size distributio...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.24958

    authors: Yang D,Moran-Mirabal JM,Parlange JY,Walker LP

    更新日期:2013-11-01 00:00:00

  • Yeast suspension filtration: flux enhancement using an upward gas/liquid slug flow-application to continuous alcoholic fermentation with cell recycle.

    abstract::This study deals with the use of an upward gas/liquid slug flow to reduce tubular mineral membrane fouling. The injection of air into the feedstream is designed to create hydrodynamic conditions that destabilize the cake layer over the membrane surface inside the filtration module complex. Experimental study was carri...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0290(19980405)58:1<47::aid-bit5

    authors: Mercier M,Maranges C,Fonade C,Lafforgue-Delorme C

    更新日期:1998-04-05 00:00:00

  • An advanced image analysis system for evaluation of somatic embryo development.

    abstract::Somatic embryogenesis is among the most promising means of large scale plant micropropagation. The development of somatic embryos is characterized by their morphological changes. Embryos in culture usually exhibit high heterogeneity and abnormality. As conventional microscopic observation is laborious and subjective, ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(SICI)1097-0290(19960405)50:1<65::AID-BIT8

    authors: Chi CM,Zhang C,Staba EJ,Cooke TJ,Hu WS

    更新日期:1996-04-05 00:00:00

  • Competition between nitrate and nitrite reduction in denitrification by Pseudomonas fluorescens.

    abstract::A pure culture of Pseudomonas fluorescens was used as a model system to study the kinetics of denitrification. An exponentially growing culture was harvested and resuspended in an anoxic acetate solution buffered with K/Na phosphate at pH values of 6.6, 7.0, 7.4, and 7.8. The temperature was kept at 28 degrees C in al...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260460512

    authors: Almeida JS,Reis MA,Carrondo MJ

    更新日期:1995-06-05 00:00:00

  • Strain engineering for high-level 5-aminolevulinic acid production in Escherichia coli.

    abstract::Herein, we report the development of a microbial bioprocess for high-level production of 5-aminolevulinic acid (5-ALA), a valuable non-proteinogenic amino acid with multiple applications in medical, agricultural, and food industries, using Escherichia coli as a cell factory. We first implemented the Shemin (i.e., C4) ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.27547

    authors: Miscevic D,Mao JY,Kefale T,Abedi D,Moo-Young M,Perry Chou C

    更新日期:2021-01-01 00:00:00

  • Optimization of enzymatic lysis of yeast.

    abstract::In enzymatic lysis of yeast for the recovery of intracellular proteins, the rupture of whole cells is caused by the action of a lytic system consisting primarily of protease and glucanase. A first-principles mechanism for the lytic reaction based on a two-layer model of the wall structure and a burst model for the dis...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260320905

    authors: Liu LC,Prokopakis GJ,Asenjo JA

    更新日期:1988-10-20 00:00:00

  • A cybernetic view of microbial growth: modeling of cells as optimal strategists.

    abstract::A cybernetic framework is presented which views microbial response in multiple substrate environments as a judicious investment of cellular resources in synthesizing different key proteins according to an optimal regulatory strategy. A mathematical model is developed within the cybernetic framework for the diauxic gro...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260270102

    authors: Dhurjati P,Ramkrishna D,Flickinger MC,Tsao GT

    更新日期:1985-01-01 00:00:00

  • Optimizing normoxic conditions in liver devices using enhanced gel matrices.

    abstract::For in vitro liver replacement devices, such as packed bed bioreactors, to maintain the essential functions of the liver, they must at least successfully support hepatocytes, the parenchymal cell of the liver. In vivo, the liver is a major consumer of oxygen. Hence it is unsurprising that the limited transport distanc...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21681

    authors: Niu M,Clemens MG,Coger RN

    更新日期:2008-04-15 00:00:00

  • Design of well and groove microchannel bioreactors for cell culture.

    abstract::Microfluidic bioreactors have been shown valuable for various cellular applications. The use of micro-wells/grooves bioreactors, in which micro-topographical features are used to protect sensitive cells from the detrimental effects of fluidic shear stress, is a promising approach to culture sensitive cells in these pe...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.22153

    authors: Korin N,Bransky A,Khoury M,Dinnar U,Levenberg S

    更新日期:2009-03-01 00:00:00

  • Gas phase transesterification reactions catalyzed by lipolytic enzymes.

    abstract::Porcine pancreatic lipase and Fusarium solani cutinase were used to catalyze transesterification reactions between methyl propionate, ethyl propionate, and a series of primary alcohols at high temperatures in a continuous packed-bed gas-solid reactor, in which the solid phase is composed of the enzyme and the substrat...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260390415

    authors: Parvaresh F,Robert H,Thomas D,Legoy MD

    更新日期:1992-02-20 00:00:00

  • Physiological response of Clostridium carboxidivorans during conversion of synthesis gas to solvents in a gas-fed bioreactor.

    abstract::Clostridium carboxidivorans P7 is one of three microbial catalysts capable of fermenting synthesis gas (mainly CO, CO(2) , and H(2) ) to produce the liquid biofuels ethanol and butanol. Gasification of feedstocks to produce synthesis gas (syngas), followed by microbial conversion to solvents, greatly expands the diver...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.24549

    authors: Ukpong MN,Atiyeh HK,De Lorme MJ,Liu K,Zhu X,Tanner RS,Wilkins MR,Stevenson BS

    更新日期:2012-11-01 00:00:00

  • Detection of cellular response to titanium dioxide nanoparticle agglomerates by sensor cells using heat shock protein promoter.

    abstract::Nanotechnology is becoming increasingly important for products used in our daily lives, such as the masses of titanium dioxide nanoparticle agglomerates (TiO(2) NPs) used in the pharmaceutical industry, for cosmetic products, or for pigments. Meanwhile, a serious lack of detailed information concerning the interaction...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.24583

    authors: Chen P,Kanehira K,Sonezaki S,Taniguchi A

    更新日期:2012-12-01 00:00:00

  • Tolerance and adaptation of ethanologenic yeasts to lignocellulosic inhibitory compounds.

    abstract::Synthetic mixtures of predominant lignocellulosic hexose sugars were supplemented with separate aliquots of three inhibitory compounds (furfural, hydroxymethylfurfural (HMF), and acetic acid) in a series of concentrations and fermented by the spent sulfite liquor (SSL)-adapted yeast strain Tembec T1 and the natural is...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.20838

    authors: Keating JD,Panganiban C,Mansfield SD

    更新日期:2006-04-20 00:00:00

  • On the enthalpy of formation of Escherichia coli K-12 cells.

    abstract::An examination is made of five methods for obtaining values of the enthalpy of formation of a unit mass of living Escherichia coli K-12 cells. The values obtained by these methods ranged from -88.95 kJ to -99.55 kJ, the gross average being 96.01 kJ, per unit carbon formula weight equivalent of living, hydrated cells. ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260390103

    authors: Battley EH

    更新日期:1992-01-05 00:00:00

  • Concentration-dependent internalization of a cytokine/cytokine receptor complex in human hematopoietic cells.

    abstract::Soluble steel factor (SF) is a potent stimulator of hematopoietic progenitor cell proliferation in vitro, and cytokine combinations that include SF can support extensive expansions of hematopoietic cells. Recently, we showed that very primitive progenitor cells from normal human bone marrow require exposure to very hi...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:

    authors: Zandstra PW,Jervis E,Haynes CA,Kilburn DG,Eaves CJ,Piret JM

    更新日期:1999-05-20 00:00:00

  • Anti-apoptotic genes Aven and E1B-19K enhance performance of BHK cells engineered to express recombinant factor VIII in batch and low perfusion cell culture.

    abstract::The engineering of production cell lines to express anti-apoptotic genes has been pursued in recent years due to potential process benefits, including enhanced cell survival, increased protein expression, and improved product quality. In this study, a baby hamster kidney cell line secreting recombinant factor VIII (BH...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21479

    authors: Nivitchanyong T,Martinez A,Ishaque A,Murphy JE,Konstantinov K,Betenbaugh MJ,Thrift J

    更新日期:2007-11-01 00:00:00

  • Analysis of Golgi pH in Chinese hamster ovary cells using ratiometric pH-sensitive fluorescent proteins.

    abstract::Acidic Golgi pH plays an important role in protein glycosylation, one of the critical quality attributes of therapeutic proteins. To determine the intracellular Golgi pH during culture, stable Chinese hamster ovary (CHO) cell clones expressing pHluorin2, a ratiometric pH-sensitive fluorescent protein (FP), in the cis-...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.26920

    authors: Lee JH,Kim J,Park JH,Heo WD,Lee GM

    更新日期:2019-05-01 00:00:00

  • Development of a robust nitrilase by fragment swapping and semi-rational design for efficient biosynthesis of pregabalin precursor.

    abstract::Protein engineering is a powerful tool for improving the properties of enzymes. However, large changes in enzyme properties are still challenging for traditional evolution strategies because they usually require multiple amino acid substitutions. In this study, a feasible evolution approach by a combination of fragmen...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.27203

    authors: Zhang Q,Lu XF,Zhang Y,Tang XL,Zheng RC,Zheng YG

    更新日期:2020-02-01 00:00:00

  • Elucidation of enzyme control mechanisms using macroscopic measurements in a mixed substrate fermentation system.

    abstract::The objective of this work was to relate macroscopically measurable on-line fermentation parameters such as dissolved oxygen, off-gas oxygen and carbon dioxide, and cell mass, to the controlled production of key intracellular enzymes under carbon limited conditions. Both batch and perturbed batch aerobic fermentations...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260310406

    authors: Pih N,De Bernardez E,Dhurjati P

    更新日期:1988-03-01 00:00:00

  • Analysis of metabolic pathways and fluxes in a newly discovered thermophilic and ethanol-tolerant Geobacillus strain.

    abstract::A recently discovered thermophilic bacterium, Geobacillus thermoglucosidasius M10EXG, ferments a range of C5 (e.g., xylose) and C6 sugars (e.g., glucose) and is tolerant to high ethanol concentrations (10%, v/v). We have investigated the central metabolism of this bacterium using both in vitro enzyme assays and 13C-ba...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.22181

    authors: Tang YJ,Sapra R,Joyner D,Hazen TC,Myers S,Reichmuth D,Blanch H,Keasling JD

    更新日期:2009-04-01 00:00:00

  • High-throughput identification of factors promoting neuronal differentiation of human neural progenitor cells in microscale 3D cell culture.

    abstract::Identification of conditions for guided and specific differentiation of human stem cell and progenitor cells is important for continued development and engineering of in vitro cell culture systems for use in regenerative medicine, drug discovery, and human toxicology. Three-dimensional (3D) and organotypic cell cultur...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.26839

    authors: Nierode GJ,Gopal S,Kwon P,Clark DS,Schaffer DV,Dordick JS

    更新日期:2019-01-01 00:00:00

  • On-line determination of animal cell concentration in two industrial high-density culture processes by dielectric spectroscopy.

    abstract::Dielectric spectroscopy was applied to two industrial high cell density culture processes and used to determine on-line the concentration of CHO cells immobilized on macroporous microcarriers in a stirred bioreactor and in a packed-bed of disk carriers. The cell concentration predicted from the spectroscopic data was ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.1197

    authors: Ducommun P,Kadouri A,von Stockar U,Marison IW

    更新日期:2002-02-05 00:00:00

  • Synthesis of polyketides from low cost substrates by the thermotolerant yeast Kluyveromyces marxianus.

    abstract::Kluyveromyces marxianus is a promising nonconventional yeast for biobased chemical production due to its rapid growth rate, high TCA cycle flux, and tolerance to low pH and high temperature. Unlike Saccharomyces cerevisiae, K. marxianus grows on low-cost substrates to cell densities that equal or surpass densities in ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.26976

    authors: McTaggart TL,Bever D,Bassett S,Da Silva NA

    更新日期:2019-07-01 00:00:00

  • Mode of action and properties of the beta-xylosidases from Talaromyces emersonii and Trichoderma reesei.

    abstract::Enzymatic hydrolysis of arabinoxylan is an important prerequisite for the utilization of hemicellulose for ethanol fermentation or for making the low calorie sweetener xylitol by catalytic hydrogenation of the generated xylose. This study focus on cloning and characterization of two industrial relevant beta-xylosidase...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.20908

    authors: Rasmussen LE,Sørensen HR,Vind J,Viksø-Nielsen A

    更新日期:2006-08-05 00:00:00

  • Esterification reactions of lipase in reverse micelles.

    abstract::The activities of lipase from Candida cylindracea and Rhizopus delemar have been investigated in water/AOT/iso-octane reverse micellar media through the use of two esterification reactions: fatty acid-alcohol esterification and glyceride synthesis. Such media promotes the occurrence of these two lipase-catalyzed react...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260350807

    authors: Hayes DG,Gulari E

    更新日期:1990-04-05 00:00:00

  • Simultaneous positioning of cells into two-dimensional arrays using ultrasound.

    abstract::Contactless simultaneous positioning of micrometer-sized particles in suspension (e.g., copolymer beads, living cells, silicon microparts) can be performed using ultrasound. Current devices are capable of collecting particles into planes or lines by exciting a resonance in the fluid by means of a piezoelectric transdu...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21315

    authors: Neild A,Oberti S,Radziwill G,Dual J

    更新日期:2007-08-01 00:00:00

  • On-line gas analysis in animal cell cultivation: I. Control of dissolved oxygen and pH.

    abstract::To monitor gas reaction rates in animal cell culture at constant dissolved oxygen concentration (DO) and constant pH it was necessary to develop improved control methods. Decoupling of both controllrs was obtained by manipulation of molar fractions of oxygen and carbon dioxide in the gas phase. Two pairs of DO and pH ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260450107

    authors: Oeggerli A,Eyer K,Heinzle E

    更新日期:1995-01-05 00:00:00