Base usage and dinucleotide frequency of infectious bursal disease virus.

abstract：:The presence of Gooseberry vein banding associated virus (GVBaV), a badnavirus in the family Caulimoviridae, is strongly correlated with gooseberry vein banding disease in Ribes spp. In this study, full-length genomic sequences of four GVBaV isolates from different hosts and geographic regions were determined to be 76...

journal_title：Virus genes

authors： Xu D,Mock R,Kinard G,Li R

更新日期：2011-08-01 00:00:00

abstract：:The genomic structure of two strains of orf virus (OV), a field isolate (MRI-Scab) which has never been passaged in cell culture, and a multiple-passage cell culture-adapted strain (Orf-11) were compared. The Orf-11 genome is approximately 8.0 kb longer than that of the MRI-Scab due to a duplication of the right-hand ...

journal_title：Virus genes

authors： McInnes CJ,Wood AR,Nettleton PE,Gilray JA

更新日期：2001-03-01 00:00:00

abstract：:Twenty-four avian influenza viruses were collected from poultry farms in three different governorates in Egypt during the years 2006-2009 and genetically characterized. All the isolates were confirmed to be type A and subtype H5 influenza virus by chromatographic strip test and hemagglutination inhibition assay. The s...

journal_title：Virus genes

authors： Eladl AE,El-Azm KI,Ismail AE,Ali A,Saif YM,Lee CW

更新日期：2011-10-01 00:00:00

abstract：:Twenty-three CSFV isolates recovered from field outbreaks in various parts of India during 2006-2009 were used for genetic analysis in the NS5B region (409 nts). Seventeen of these were studied earlier [16] in the 5'UTR region. Phylogenetic analysis indicated the continued dominance of subgroup 1.1 strains in the coun...

journal_title：Virus genes

authors： Patil SS,Hemadri D,Veeresh H,Sreekala K,Gajendragad MR,Prabhudas K

更新日期：2012-02-01 00:00:00

abstract：:We report here the complete genome sequence of a bipartite virus, herein denoted WLPRV/human/BRA/TO-34/201, from a sample collected in 2015 from a two-year-old child in Brazil presenting acute gastroenteritis. The virus has 98-99% identity (segments 2 and 1, respectively) with the Wuhan large pig roundworm virus (uncl...

journal_title：Virus genes

authors： Luchs A,Leal E,Komninakis SV,de Pádua Milagres FA,Brustulin R,da Aparecida Rodrigues Teles M,Gill DE,Deng X,Delwart E,Sabino EC,da Costa AC

更新日期：2018-06-01 00:00:00

abstract：UNLABELLED:This study determined the complete nucleotide sequence of Beet cryptic virus 1 (BCV1). As expected by analogy to previously sequenced alphacryptoviruses, dsRNA1 (2008 bp) encodes a 72.5-kDa protein containing sequence motifs characteristic for RNA-dependent RNA polymerases (RdRp). In addition to the full-len...

journal_title：Virus genes

authors： Szego A,Enünlü N,Deshmukh SD,Veliceasa D,Hunyadi-Gulyás E,Kühne T,Ilyés P,Potyondi L,Medzihradszky K,Lukács N

更新日期：2010-04-01 00:00:00

abstract：:Infectious full-length cDNA clones from the genomic RNAs of a subgroup II cucumber mosaic cucumovirus strain (Trk7) were obtained. Sequence analysis of the whole genome revealed strong homology (99%) to the genome of Q-CMV, the only subgroup II strain whose entire genomic nucleotide sequence had been available in the ...

journal_title：Virus genes

authors： Szilassy D,Salánki K,Balázs E

更新日期：1999-01-01 00:00:00

abstract：:In this study, we report the discovery and molecular characterization of a novel mycovirus, Nigrospora oryzae fusarivirus 1 (NoFV1) isolated from the rice-infecting fungus Nigrospora oryzae. Excluding a poly (A) tail, the genome of the virus is 7004 nucleotide (nt) long containing three putative nonoverlapping open re...

journal_title：Virus genes

authors： Zhong J,Zhao SQ,Li GF,Pang XD,Deng XJ,Zhu HJ,Da Gao B,Zhou Q

更新日期：2016-12-01 00:00:00

abstract：:A maximum clade credibility tree constructed using the full-length spike (S) and hemagglutinin-esterase genes revealed that Vietnamese Bovine coronavirus (BCoV) strains belong to a single cluster (C1); therefore, they might share a common origin with Cuban and Chinese BCoV strains. The omega values of cluster 1 (C1) a...

journal_title：Virus genes

authors： Shin J,Tark D,Le VP,Choe S,Cha RM,Park GN,Cho IS,Nga BTT,Lan NT,An DJ

更新日期：2019-06-01 00:00:00

abstract：:The Chinese equine infectious anemia virus (EIAV) virulent strain EIAV(LN40) is derived from a naturally occurring virus by continuously passing in horses for 16 generations. Its genome sequence is 23% different from that of the American strains or the Japanese strains, and the variation of envelope gp90 surface unit ...

journal_title：Virus genes

authors： Wang X,Wang S,Lin Y,Jiang C,Ma J,Zhao L,Lv X,Wang F,Shen R,Zhou J

更新日期：2011-04-01 00:00:00

abstract：:Novel duck reovirus (NDRV), the prototype strain of the species Avian orthoreovirus (ARV), is associated with high mortality in Pekin ducklings. σC is an outer capsid protein encoded by the S1 genome segment of NDRV which mediates attachment to host cells. Our previous studies using immunoprecipitation and mass spectr...

journal_title：Virus genes

authors： Xiao R,Mi X,Sun J,Ding M,Li C,Zhu J,Liu G,Ma W,Zhou H,Chen Z

更新日期：2020-06-01 00:00:00

abstract：:Tobacco bushy top disease is caused by tobacco bushy top virus (TBTV, a member of the genus Umbravirus) which is dependent on tobacco vein-distorting virus (TVDV) to act as a helper virus encapsidating TBTV and enabling its transmission by aphids. Isometric virions from diseased tobacco plants were purified and diseas...

journal_title：Virus genes

authors： Mo XH,Chen ZB,Chen JP

更新日期：2010-12-01 00:00:00

abstract：:We amplified the capsid protein gene fragments of 30 Japanese isolates of feline calicivirus (FCV), including the C, D, and E regions, by reverse transcription-polymerase chain reaction (RT-PCR), followed by direct sequencing. Alignment of the predicted amino acid sequences, together with other published sequences fro...

journal_title：Virus genes

authors： Horimoto T,Takeda Y,Iwatsuki-Horimoto K,Sugii S,Tajima T

更新日期：2001-01-01 00:00:00

abstract：:Virus-like particles (VLPs, named HmTV1-17), about 40 nm in diameter were found in the violet root rot fungus Helicobasidium mompa Tanaka strain No. 17, which had been isolated from an apple tree. Purified preparations of HmTV1-17 contained two species of double-stranded RNA (dsRNA), designated 17L and 17S. cDNAs were...

journal_title：Virus genes

authors： Nomura K,Osaki H,Iwanami T,Matsumoto N,Ohtsu Y

更新日期：2003-05-01 00:00:00

abstract：:In this study, a novel duplex nanoparticle-assisted polymerase chain reaction (nanoPCR) assay was developed to detect porcine epidemic diarrhea virus (PEDV) and porcine transmissible gastroenteritis virus (TGEV). Two pairs of primers were designed based on the conserved region within the N gene of PEDV and TGEV. In a ...

journal_title：Virus genes

authors： Zhu Y,Liang L,Luo Y,Wang G,Wang C,Cui Y,Ai X,Cui S

更新日期：2017-02-01 00:00:00

abstract：:Bovine viral diarrhea virus (BVDV) belongs to the Pestivirus genus of the Flaviviridae family and has worldwide distribution, being one of the main causes of economic losses in cattle raising. The genome of pestiviruses is a single strand of positive-sense RNA with a length of 12.3 kb, which encodes one open reading f...

journal_title：Virus genes

authors： Mirosław P,Polak MP

更新日期：2020-08-01 00:00:00

abstract：:Infection of infants in their first year of life, children and elderly people with the respiratory syncytial virus (RSV) endangers the life of the patient. An attempt to develop a formalin-inactivated RSV (FI-RSV) vaccine during the 1960s resulted in an aggravated infection in immunized children, leading to hospitaliz...

journal_title：Virus genes

authors： Becker Y

更新日期：2006-10-01 00:00:00

abstract：:The broad distribution and prevalence of H3 subtype influenza viruses in avian and mammalian hosts constitutes a global threat to both human and veterinary health. In this present study, six H3N8 influenza viruses isolated from domestic ducks during 2004-2005 in northern China were genetically and phylogenetically cha...

journal_title：Virus genes

authors： Pu J,Liu QF,Xia YJ,Fan YL,Brown EG,Tian FL,Liu JH

更新日期：2009-02-01 00:00:00

abstract：:We have determined the complete capsid gene sequence of 20 Norwalk-like viruses (NLVs) collected predominantly from outbreaks in the UK between 1989 and 1996. These comprised nine genogroup I and eleven genogroup II strains. Phylogenetic analysis of these and 15 published sequences suggest seven genomic sub-groups wit...

journal_title：Virus genes

authors： Green J,Vinje J,Gallimore CI,Koopmans M,Hale A,Brown DW,Clegg JC,Chamberlain J

更新日期：2000-01-01 00:00:00

abstract：:Tumor-selectively replicating (oncolytic) viruses are promising tools for therapy of solid cancers and have been initially developed to achieve potent tumor lysis with acceptable side effects on healthy tissue. However, in recent years, oncolytic viruses have been recognized as therapeutic vehicles exhibiting multipro...

journal_title：Virus genes

authors： Niemann J,Kühnel F

更新日期：2017-10-01 00:00:00

abstract：:The complete genomes of three rabies viruses (BD0406CC, BV9901PJ, and 08F40) of two raccoon dogs (Nyctereutes procyonoides koreensis) and a cow were determined. The genomic organization is typical of rabies viruses, and the open reading frames of the N, P, M, G, and L genes are 1,353, 894, 609, 1,575, and 6,384 bases ...

journal_title：Virus genes

authors： Oem JK,Kim SH,Kim YH,Lee MH,Lee KK

更新日期：2013-12-01 00:00:00

abstract：:This study describes the results of the sequencing and analysis of segments of Blocks II and III of the RNA polymerase L gene of Rabies virus isolates from different reservoir species of Brazil. The phylogenetic relations of the virus were determined and a variety of species-specific nucleotides were found in the anal...

journal_title：Virus genes

authors： Carnieli P Jr,de Novaes Oliveira R,de Oliveira Fahl W,de Carvalho Ruthner Batista HB,Scheffer KC,Iamamoto K,Castilho JG

更新日期：2012-08-01 00:00:00

abstract：:Human parainfluenza virus type 3 (HPIV3) causes the majority of childhood viral pneumonia around the world. Fusing the viral and target cell membranes is crucial for its entry into target cells, and the fusion process requires the concerted actions of two viral glycoproteins: hemagglutinin-neuraminidase (HN) and fusio...

journal_title：Virus genes

authors： Liu Y,Chi M,Wen H,Zhao L,Song Y,Liu N,Chi L,Wang Z

更新日期：2020-02-01 00:00:00

abstract：:Canine distemper (CD) is a highly contagious, often fatal, multisystemic, and incurable disease in dogs and other carnivores, which is caused by canine distemper virus (CDV). Although vaccines have been used as the principal means of controlling the disease, CD has been reported in vaccinated animals. The hemoagglutin...

journal_title：Virus genes

authors： Li W,Li T,Liu Y,Gao Y,Yang S,Feng N,Sun H,Wang S,Wang L,Bu Z,Xia X

更新日期：2014-08-01 00:00:00

abstract：:The sequence of rice hoja blanca tenuivirus RNA-2 is analysed and compared to its counter-part in rice stripe tenuivirus. The RNA encodes two proteins, in an ambisense arrangement. The 94 kD pc2, located in the complementary sense RNA, has several features typical of viral membrane (glyco)proteins, and also has region...

journal_title：Virus genes

authors： De Miranda JR,Muñoz M,Wu R,Hull R,Espinoza AM

更新日期：1996-01-01 00:00:00

abstract：:Two or three regions containing three or more successive newly defined heptads of a-d hydrophobic amino acid repeats have been located in the cDNA-derived amino acid sequences of glycoprotein G of all rhabdoviruses examined (rabies, vesicular stomatitis, fish, and plant rhabdoviruses) by computer search. These new hep...

journal_title：Virus genes

authors： Coll JM

更新日期：1995-01-01 00:00:00

abstract：:Newcastle disease virus with velogenic characteristics circulates in the poultry industry in Mexico and various other American countries. In Mexico, vaccine efficacy testing to obtain commercial registration is reliant on a challenge with a velogenic strain known colloquially as Chimalhuacan due to the site where it w...

journal_title：Virus genes

authors： Absalón AE,Mariano-Matías A,García LJ,Morales-Garzón A,Toscano-Contreras A,Lucio-Decanini E,Cortés-Espinosa DV

更新日期：2014-10-01 00:00:00

abstract：:Betasatellites are single-stranded circular DNAs associated with a number of monopartite begomoviruses. Betasatellites rely on the helper begomoviruses for replication and movement in plant tissues and plant-to-plant transmission by vectors. Their genomes are approximately half the size of the helper viruses and consi...

journal_title：Virus genes

authors： Eini O,Behjatnia SA

更新日期：2016-10-01 00:00:00

abstract：:The incidence of watermelon chlorotic stunt disease and the molecular characterization of the Jordanian isolate of Watermelon chlorotic stunt virus (WmCSV-[JO]) are described in this study. Symptomatic leaf samples obtained from watermelon (Citrullus lanatus Thunb.), melon (Cucumis melo L.), squash (Cucurbita pepo), c...

journal_title：Virus genes

authors： Al-Musa A,Anfoka G,Al-Abdulat A,Misbeh S,Haj Ahmed F,Otri I

更新日期：2011-08-01 00:00:00

abstract：:Three double-stranded RNA (dsRNA) segments from Aspergillus ochraceus isolate FA 0611, designated as AoR1, AoR2, and AoR3, were cloned and sequenced. AoR1 was identical with AoV dsRNA 1 previously reported from A. ochraceus ATCC 28706, which putatively encoded an RNA-dependent RNA polymerase of an unidentified mycovir...

journal_title：Virus genes

authors： Liu W,Duns G,Chen J

更新日期：2008-12-01 00:00:00