Fluorescence energy transfer reveals microdomain formation at physiological temperatures in lipid mixtures modeling the outer leaflet of the plasma membrane.

Abstract:

:An approach is described using fluorescence resonance energy transfer (FRET) to detect inhomogeneity in lipid organization, on distance scales of the order of tens of nanometers or greater, in lipid bilayers. This approach compares the efficiency of energy transfer between two matched fluorescent lipid donors, differing in their affinities for ordered versus disordered regions of the bilayer, and an acceptor lipid that distributes preferentially into disordered regions. Inhomogeneities in bilayer organization, on spatial scales of tens of nanometers or greater, are detected as a marked difference in the efficiencies of quenching of fluorescence of the two donor species by the acceptor. Using a novel pair of 7-nitrobenz-2-oxa-1,3-diazol-4-yl (NBD)-labeled tetraacyl lipids as donor species with a rhodaminyl-labeled acceptor, this strategy faithfully reports homo- versus inhomogeneous mixing in each of several lipid bilayer systems whose organization on the FRET distance scale can be predicted from previous findings. Interestingly, however, the present FRET method reports clear evidence of inhomogeneity in the organization of mixtures combining sphingomyelin or saturated phospholipids with unsaturated phospholipids and physiological proportions of cholesterol, even at physiological temperatures where these systems have been reported to appear homogeneous by fluorescence microscopy. These results indicate that under physiological conditions, lipid mixtures mimicking the lipid composition of the outer leaflet of the plasma membrane can form domains on a spatial scale comparable to that inferred for the dimensions of lipid rafts in biological membranes.

journal_name

Biophys J

journal_title

Biophysical journal

authors

Silvius JR

doi

10.1016/S0006-3495(03)74542-1

subject

Has Abstract

pub_date

2003-08-01 00:00:00

pages

1034-45

issue

2

eissn

0006-3495

issn

1542-0086

pii

S0006-3495(03)74542-1

journal_volume

85

pub_type

杂志文章
  • A GTPase chimera illustrates an uncoupled nucleotide affinity and release rate, providing insight into the activation mechanism.

    abstract::The release of GDP from GTPases signals the initiation of a GTPase cycle, where the association of GTP triggers conformational changes promoting binding of downstream effector molecules. Studies have implicated the nucleotide-binding G5 loop to be involved in the GDP release mechanism. For example, biophysical studies...

    journal_title:Biophysical journal

    pub_type: 信件

    doi:10.1016/j.bpj.2014.10.064

    authors: Guilfoyle AP,Deshpande CN,Font Sadurni J,Ash MR,Tourle S,Schenk G,Maher MJ,Jormakka M

    更新日期:2014-12-16 00:00:00

  • Distribution of ganglioside GM1 in L-alpha-dipalmitoylphosphatidylcholine/cholesterol monolayers: a model for lipid rafts.

    abstract::The distribution of low concentrations of ganglioside GM1 in L-alpha-dipalmitoylphosphatidylcholine (DPPC) and DPPC/cholesterol monolayers supported on mica has been studied using atomic force microscopy (AFM). The monolayers studied correspond to a pure gel phase and a mixture of liquid-expanded (LE) and liquid-conde...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(00)76516-7

    authors: Yuan C,Johnston LJ

    更新日期:2000-11-01 00:00:00

  • Ratchetlike properties of in vitro microtubule translocation by a Chlamydomonas inner-arm dynein species c in the presence of flow.

    abstract::To investigate the force generation properties of Chlamydomonas axonemal inner-arm dyneins in response to external force, we analyzed microtubule gliding on dynein-coated surfaces under shear flow. When inner-arm dynein c was used, microtubule translocation in the downstream direction accelerated with increasing flow ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2009.07.010

    authors: Kikushima K,Kamiya R

    更新日期:2009-09-16 00:00:00

  • Mechanics and Buckling of Biopolymeric Shells and Cell Nuclei.

    abstract::We study a Brownian dynamics simulation model of a biopolymeric shell deformed by axial forces exerted at opposing poles. The model exhibits two distinct, linear force-extension regimes, with the response to small tensions governed by linear elasticity and the response to large tensions governed by an effective spring...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2017.08.034

    authors: Banigan EJ,Stephens AD,Marko JF

    更新日期:2017-10-17 00:00:00

  • The first extracellular loop domain is a major determinant of charge selectivity in connexin46 channels.

    abstract::Intercellular channels formed of members of the gene family of connexins (Cxs) vary from being substantially cation selective to being anion selective. We took advantage of the ability of Cx46 to function as an unopposed hemichannel to examine the basis of Cx charge selectivity. Previously we showed Cx46 hemichannels ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(00)76539-8

    authors: Trexler EB,Bukauskas FF,Kronengold J,Bargiello TA,Verselis VK

    更新日期:2000-12-01 00:00:00

  • Measuring actin flow in 3D cell protrusions.

    abstract::Actin dynamics is important in determining cell shape, tension, and migration. Methods such as fluorescent speckle microscopy and spatial temporal image correlation spectroscopy have been used to capture high-resolution actin turnover dynamics within cells in two dimensions. However, these methods are not directly app...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2013.07.057

    authors: Chiu CL,Digman MA,Gratton E

    更新日期:2013-10-15 00:00:00

  • Cholesterol Regulates Monocyte Rolling through CD44 Distribution.

    abstract::Cholesterol is an important risk factor of atherosclerosis, due to its active uptake by monocytes/macrophages. Monocyte recruitment from flowing blood to atherosclerotic foci is the key first step in the development of atherosclerosis. Cholesterol content alters cell membrane stiffness, and lateral lipid and protein d...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2017.02.021

    authors: Saha AK,Osmulski P,Dallo SF,Gaczynska M,Huang TH,Ramasubramanian AK

    更新日期:2017-04-11 00:00:00

  • The stiffness of the flagella of impaled bull sperm.

    abstract::The elastic rigidity (stiffness) of impaled motionless bull sperm flagella has been determined by a manipulatory technique which permitted direct analytical treatment of the experimental system. The effects of external ATP and ADP were measured. It was found that ATP acts as a plasticizing agent, while ADP does not. T...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(73)85997-1

    authors: Lindemann CB,Rudd WG,Rikmenspoel R

    更新日期:1973-05-01 00:00:00

  • Mathematical analysis of cell-target encounter rates in three dimensions. Effect of chemotaxis.

    abstract::Efficient and rapid immune response upon challenge by an infectious agent is vital to host defense. The encounter of leukocytes (white blood cells of the immune system) with their targets is the first step in this response. Analysis of the kinetics of this process is essential not only to understanding dynamic behavio...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(90)82620-5

    authors: Charnick SB,Lauffenburger DA

    更新日期:1990-05-01 00:00:00

  • On the wobbling-in-cone analysis of fluorescence anisotropy decay.

    abstract::Interpretation of fluorescence anisotropy decay for the case of restricted rotational diffusion often requires a model. To investigate the extent of model dependence, two models are compared: a strict cone model, in which a fluorescent probe wobbles uniformly within a cone, and a Gaussian model, where the stationary d...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(82)84692-4

    authors: Kinosita K Jr,Ikegami A,Kawato S

    更新日期:1982-02-01 00:00:00

  • Order parameters of a transmembrane helix in a fluid bilayer: case study of a WALP peptide.

    abstract::A new solid-state NMR-based strategy is established for the precise and efficient analysis of orientation and dynamics of transmembrane peptides in fluid bilayers. For this purpose, several dynamically averaged anisotropic constraints, including (13)C and (15)N chemical shift anisotropies and (13)C-(15)N dipolar coupl...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2010.01.016

    authors: Holt A,Rougier L,Réat V,Jolibois F,Saurel O,Czaplicki J,Killian JA,Milon A

    更新日期:2010-05-19 00:00:00

  • Properties of gap junction channels formed by Cx46 alone and in combination with Cx50.

    abstract::Gap junctions formed of connexin46 (Cx46) and connexin50 (Cx50) in lens fiber cells are crucial for maintaining lens transparency. We determined the functional properties of homotypic Cx46, heterotypic Cx46/Cx50, and heteromeric Cx46/Cx50 channels in a communication-deficient neuroblastoma (N2A) cell line, using dual ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(00)76444-7

    authors: Hopperstad MG,Srinivas M,Spray DC

    更新日期:2000-10-01 00:00:00

  • Mechanism of pH-triggered collapse of phosphatidylethanolamine liposomes stabilized by an ortho ester polyethyleneglycol lipid.

    abstract::The mechanism of pH-triggered destabilization of liposomes composed of a polyethyleneglycol-orthoester-distearoylglycerol lipid (POD) and phosphatidyl ethanolamine (PE) has been studied using an ANTS/DPX leakage and a lipid-mixing assay. We developed a kinetic model that relates POD hydrolysis to liposome collapse. Th...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/s0006-3495(03)74986-8

    authors: Guo X,MacKay JA,Szoka FC Jr

    更新日期:2003-03-01 00:00:00

  • Molecular adsorption steers bacterial swimming at the air/water interface.

    abstract::Microbes inhabiting Earth have adapted to diverse environments of water, air, soil, and often at the interfaces of multiple media. In this study, we focus on the behavior of Caulobacter crescentus, a singly flagellated bacterium, at the air/water interface. Forward swimming C. crescentus swarmer cells tend to get phys...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2013.05.026

    authors: Morse M,Huang A,Li G,Maxey MR,Tang JX

    更新日期:2013-07-02 00:00:00

  • Understanding adsorption-desorption dynamics of BMP-2 on hydroxyapatite (001) surface.

    abstract::The interaction between protein molecules and the hydroxyapatite (HAP) crystal is an important research topic in many fields. However, the nature of their noncovalent bonding is still not clear at the atomic level. In this work, molecular dynamics simulation, steered molecular dynamics simulation, and quantum chemistr...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.106.103168

    authors: Dong X,Wang Q,Wu T,Pan H

    更新日期:2007-08-01 00:00:00

  • Paxillin dynamics measured during adhesion assembly and disassembly by correlation spectroscopy.

    abstract::Paxillin is an adaptor molecule involved in the assembly of focal adhesions. Using different fluorescence fluctuation approaches, we established that paxillin-EGFP is dynamic on many timescales within the cell, ranging from milliseconds to seconds. In the cytoplasmic regions, far from adhesions, paxillin is uniformly ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.107.104984

    authors: Digman MA,Brown CM,Horwitz AR,Mantulin WW,Gratton E

    更新日期:2008-04-01 00:00:00

  • Fluorescence emission spectroscopy of 1,4-dihydroxyphthalonitrile. A method for determining intracellular pH in cultured cells.

    abstract::We have developed new methodology for measuring intracellular pH (pHi) in cultured cell monolayers and epithelia by analyzing the emission spectra of the trapped fluorescent pH probe, 1,4-dihydroxyphthalonitrile (1,4-DHPN). This compound is unique since both its acid and base forms possess different fluorescence emiss...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(85)83805-4

    authors: Kurtz I,Balaban RS

    更新日期:1985-09-01 00:00:00

  • Nucleation and decay initiation are the stiffness-sensitive phases of focal adhesion maturation.

    abstract::A cell plated on a two-dimensional substrate forms adhesions with that surface. These adhesions, which consist of aggregates of various proteins, are thought to be important in mechanosensation, the process by which the cell senses and responds to the mechanical properties of the substrate (e.g., stiffness). On the ba...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2011.11.010

    authors: Walcott S,Kim DH,Wirtz D,Sun SX

    更新日期:2011-12-21 00:00:00

  • Reversal of the surface charge asymmetry in purple membrane due to single amino acid substitutions.

    abstract::Twenty-seven mutant bacteriorhodopsin's were screened to determine the PKa for reversal of the permanent electric dipole moment. The photoelectric response of an aqueous purple-membrane suspension was used to determine the direction of the purple-membrane dipole moment as a function of pH. The pK(a) for the dipole rev...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(96)79802-8

    authors: Hsu KC,Rayfield GW,Needleman R

    更新日期:1996-05-01 00:00:00

  • The Berg-Purcell limit revisited.

    abstract::Biological systems often have to measure extremely low concentrations of chemicals with high precision. When dealing with such small numbers of molecules, the inevitable randomness of physical transport processes and binding reactions will limit the precision with which measurements can be made. An important question ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2013.12.030

    authors: Kaizu K,de Ronde W,Paijmans J,Takahashi K,Tostevin F,ten Wolde PR

    更新日期:2014-02-18 00:00:00

  • Mechanism for Triggered Waves in Atrial Myocytes.

    abstract::Excitation-contraction coupling in atrial cells is mediated by calcium (Ca) signaling between L-type Ca channels and Ryanodine receptors that occurs mainly at the cell boundary. This unique architecture dictates essential aspects of Ca signaling under both normal and diseased conditions. In this study we apply laser s...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2017.06.026

    authors: Shiferaw Y,Aistrup GL,Wasserstrom JA

    更新日期:2017-08-08 00:00:00

  • Molecular dissection of N2B cardiac titin's extensibility.

    abstract::Titin is a giant filamentous polypeptide of multidomain construction spanning between the Z- and M-lines of the cardiac muscle sarcomere. Extension of the I-band segment of titin gives rise to a force that underlies part of the diastolic force of cardiac muscle. Titin's force arises from its extensible I-band region, ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(99)77149-3

    authors: Trombitás K,Freiburg A,Centner T,Labeit S,Granzier H

    更新日期:1999-12-01 00:00:00

  • Specific ion effects: why the properties of lysozyme in salt solutions follow a Hofmeister series.

    abstract::Protein solubility in aqueous solutions depends in a complicated and not well understood way on pH, salt type, and salt concentration. Why for instance does the use of two different monovalent salts, potassium thiocyanate and potassium chloride, produce such different results? One important and previously neglected so...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(03)74512-3

    authors: Boström M,Williams DR,Ninham BW

    更新日期:2003-08-01 00:00:00

  • Machine Learning Methods for X-Ray Scattering Data Analysis from Biomacromolecular Solutions.

    abstract::Small-angle x-ray scattering (SAXS) of biological macromolecules in solutions is a widely employed method in structural biology. SAXS patterns include information about the overall shape and low-resolution structure of dissolved particles. Here, we describe how to transform experimental SAXS patterns to feature vector...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2018.04.018

    authors: Franke D,Jeffries CM,Svergun DI

    更新日期:2018-06-05 00:00:00

  • Residue-specific α-helix propensities from molecular simulation.

    abstract::Formation of α-helices is a fundamental process in protein folding and assembly. By studying helix formation in molecular simulations of a series of alanine-based peptides, we obtain the temperature-dependent α-helix propensities of all 20 naturally occurring residues with two recent additive force fields, Amber ff03w...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2012.02.024

    authors: Best RB,de Sancho D,Mittal J

    更新日期:2012-03-21 00:00:00

  • Introducing titratable water to all-atom molecular dynamics at constant pH.

    abstract::Recent development of titratable coions has paved the way for realizing all-atom molecular dynamics at constant pH. To further improve physical realism, here we describe a technique in which proton titration of the solute is directly coupled to the interconversion between water and hydroxide or hydronium. We test the ...

    journal_title:Biophysical journal

    pub_type: 信件

    doi:10.1016/j.bpj.2013.06.036

    authors: Chen W,Wallace JA,Yue Z,Shen JK

    更新日期:2013-08-20 00:00:00

  • The nature of sources of bioelectric and biomagnetic fields.

    abstract::The goal of this paper is to examine the origins and relative importance of primary and secondary sources of electric and magnetic fields for excitable tissue. It is shown that for axonal and cardiac tissue a comparison of the relative field strength from both primary and secondary sources shows only the latter to be ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(82)84521-9

    authors: Plonsey R

    更新日期:1982-09-01 00:00:00

  • Determination of membrane-insertion free energies by molecular dynamics simulations.

    abstract::The accurate prediction of membrane-insertion probability for arbitrary protein sequences is a critical challenge to identifying membrane proteins and determining their folded structures. Although algorithms based on sequence statistics have had moderate success, a complete understanding of the energetic factors that ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2012.01.021

    authors: Gumbart J,Roux B

    更新日期:2012-02-22 00:00:00

  • Single-molecule analysis of epidermal growth factor signaling that leads to ultrasensitive calcium response.

    abstract::Quantitative relationships between inputs and outputs of signaling systems are fundamental information for the understanding of the mechanism of signal transduction. Here we report the correlation between the number of epidermal growth factor (EGF) bindings and the response probability of intracellular calcium elevati...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.104.053330

    authors: Uyemura T,Takagi H,Yanagida T,Sako Y

    更新日期:2005-05-01 00:00:00

  • Charge movement and SR calcium release in frog skeletal muscle can be related by a Hodgkin-Huxley model with four gating particles.

    abstract::Charge movement currents (IQ) and calcium transients (delta[Ca2+]) were measured simultaneously in frog skeletal muscle fibers, voltage clamped in a double vaseline gap chamber, using Antipyrylazo III as the calcium indicator. The rate of release of calcium from the SR (Rrel) was calculated from the calcium transients...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(92)81920-3

    authors: Simon BJ,Hill DA

    更新日期:1992-05-01 00:00:00