Conservation of electrostatic properties within enzyme families and superfamilies.

Abstract:

:Electrostatic interactions play a key role in enzyme catalytic function. At long range, electrostatics steer the incoming ligand/substrate to the active site, and at short distances, electrostatics provide the specific local interactions for catalysis. In cases in which electrostatics determine enzyme function, orthologs should share the electrostatic properties to maintain function. Often, electrostatic potential maps are employed to depict how conserved surface electrostatics preserve function. We expand on previous efforts to explain conservation of function, using novel electrostatic sequence and structure analyses of four enzyme families and one enzyme superfamily. We show that the spatial charge distribution is conserved within each family and superfamily. Conversely, phylogenetic analysis of key electrostatic residues provide the evolutionary origins of functionality.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Livesay DR,Jambeck P,Rojnuckarin A,Subramaniam S

doi

10.1021/bi026918f

subject

Has Abstract

pub_date

2003-04-01 00:00:00

pages

3464-73

issue

12

eissn

0006-2960

issn

1520-4995

journal_volume

42

pub_type

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