Antigen, allele, and haplotype frequencies report of the ASHI minority antigens workshops: part 1, African-Americans.

Abstract:

:HLA typing was performed on 977 African Americans residing throughout most of the United States. Class I and class II antigens and class II alleles were defined for all individuals and class I alleles were determined for a subset of individuals. The occurrence of 854 of the individuals in family groups permitted direct counting of allele and haplotype frequencies. The data were analyzed for antigen, allele, and haplotype frequencies; recombination frequencies; segregation distortion; distribution of haplotype frequencies; linkage disequilibria; and geographic distribution of DR antigens. Tables of the antigen, allele, the most common two and three point haplotypes, and 88 extended haplotypes that include class I and class II alleles are presented. Notable findings include a lower than expected frequency of recombination between the B and DR loci (theta= 0.0013), lower than expected frequency of inheritance (44.5% vs 54.5%) of the DRB1*1503; DQB1*0602 haplotype, lower than anticipated linkage disequilibrium values for DR; DQ haplotypes, and a skewed geographic distribution of DR antigens.

journal_name

Hum Immunol

journal_title

Human immunology

authors

Zachary AA,Bias WB,Johnson A,Rose SM,Leffell MS

doi

10.1016/s0198-8859(01)00305-6

subject

Has Abstract

pub_date

2001-10-01 00:00:00

pages

1127-36

issue

10

eissn

0198-8859

issn

1879-1166

pii

S0198-8859(01)00305-6

journal_volume

62

pub_type

多中心研究
  • Association of CD209 polymorphisms with tuberculosis in an Indonesian population.

    abstract::Tuberculosis (TB) caused by Mycobacterium tuberculosis is a major cause of morbidity and mortality worldwide. Thus far, many candidate genes have been investigated for their possible association with TB. Dendritic cell-specific ICAM-3 grabbing nonintegrin (DC-SIGN) encoded by CD209 is the major receptor of M tuberculo...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2011.04.004

    authors: Kobayashi K,Yuliwulandari R,Yanai H,Lien LT,Hang NT,Hijikata M,Keicho N,Tokunaga K

    更新日期:2011-09-01 00:00:00

  • Association of KCNQ1 and KLF14 polymorphisms and risk of type 2 diabetes mellitus: A global meta-analysis.

    abstract::rs151290 in KCNQ1 and rs972283 in KLF14 have been evaluated in terms of risk of type 2 diabetes mellitus (T2DM), but the results are inconsistent. We performed an meta-analysis to assess the contributions of rs151290 in KCNQ1 and rs972283 in KLF14 to risk of T2DM. We searched the worldwide literature published from 20...

    journal_title:Human immunology

    pub_type: 杂志文章,meta分析

    doi:10.1016/j.humimm.2014.01.008

    authors: Wang J,Zhang J,Shen J,Hu D,Yan G,Liu X,Xu X,Pei L,Li Y,Sun C

    更新日期:2014-04-01 00:00:00

  • Oligonol, a lychee fruit-derived low-molecular form of polyphenol mixture, suppresses inflammatory cytokine production from human monocytes.

    abstract::Monocytes produce high levels of inflammatory cytokines including IL-6 and TNF-α that are involved in autoimmunity, inflammatory diseases, cardiovascular disease and obesity. Therapies targeting IL-6 and TNF-α have been utilized in treating chronic inflammatory diseases. Oligonol is a lychee fruit-derived low-molecula...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2016.04.011

    authors: Lee N,Shin MS,Kang Y,Park K,Maeda T,Nishioka H,Fujii H,Kang I

    更新日期:2016-06-01 00:00:00

  • Molecular variations in the promoter and coding regions of human Tim-1 gene and their association in Koreans with asthma.

    abstract::The family of T-cell immunoglobulin domain and mucin domain (TIM) proteins is identified to be expressed on T cells. A member of Tim family, TIM-1, was considered as a membrane protein that is associated with the development of helper T cell (Th2) biased immune responses, and may be selectively expressed on Th2 cells....

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2003.09.011

    authors: Chae SC,Song JH,Heo JC,Lee YC,Kim JW,Chung HT

    更新日期:2003-12-01 00:00:00

  • Two distinct forms of soluble MHC class I molecules synthesized by different mechanisms in normal rat cells in vitro.

    abstract::Rat soluble MHC class I synthesis was studied at both RNA and protein levels to determine whether multiple forms of soluble MHC class I molecules are produced by different mechanisms. RT-PCR and sequencing of MHC class I transcripts identified an alternatively spliced nonclassical MHC class I gene product, lacking bot...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/s0198-8859(98)00039-1

    authors: Zhai Y,Knechtle S

    更新日期:1998-07-01 00:00:00

  • Elevation of HLA-G-expressing DC-10 cells in patients with gastric cancer.

    abstract::DC-10 is a distinct subset of human tolerogenic dendritic cells (DCs) which express high levels of human leukocyte antigen-G (HLA-G). DC-10 could induce adaptive type 1 regulatory T cells through the IL-10 dependent ILT4/HLA-G signaling pathway. However, the significance of DC-10 in malignancies remains unclear. In th...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2016.01.003

    authors: Xu DP,Shi WW,Zhang TT,Lv HY,Li JB,Lin A,Yan WH

    更新日期:2016-09-01 00:00:00

  • Polymorphism in L-selectin, E-selectin and ICAM-1 genes in Asian Indian pediatric patients with celiac disease.

    abstract::Celiac disease (CD) follows an autoimmune course in which both genetic and environmental factors contribute to its development. A strong association with HLA class II molecules, predominantly HLA-DQ2, has been reported in most ethnic groups with CD. The aim of this study was to determine if genetic polymorphisms in L-...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2006.05.001

    authors: Kaur G,Rapthap CC,Kumar S,Bhatnagar S,Bhan MK,Mehra NK

    更新日期:2006-08-01 00:00:00

  • Functional impact of A91V mutation of the PRF1 perforin gene.

    abstract::Perforin (PRF1) gene mutations have been associated with Familial Hemophagocytic Lymphohistiocytosis type 2 (FHL2). Substitution p.A91V (c.272C>T) in exon 2 was first described as a neutral polymorphism. Nonetheless, recent clinical evidence and functional assays, suggest a potential pathogenic role for p.A91V, especi...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2012.10.011

    authors: Martínez-Pomar N,Lanio N,Romo N,Lopez-Botet M,Matamoros N

    更新日期:2013-01-01 00:00:00

  • The impact of non-HLA antibodies on outcomes after lung transplantation and implications for therapeutic approaches.

    abstract::The role of donor-specific antibodies (DSA) to mismatched human leukocyte antigens (HLA) in lung allograft rejection has been recognized over the past 20 years. During this time, there has been growing experience and recognition of an important role for non-HLA antibodies in lung allograft rejection. Multiple self-ant...

    journal_title:Human immunology

    pub_type: 杂志文章,评审

    doi:10.1016/j.humimm.2019.04.008

    authors: Hachem RR

    更新日期:2019-08-01 00:00:00

  • A study of HLA-B∗15:02 in a Sri Lankan population: Implications for pharmacogenomic testing.

    abstract::HLA-B∗15:02 is known as a biomarker for carbamazepine (CBZ) induced Steven-Johnson Syndrome and Toxic Epidermal Necrolysis (SJS/TEN) in some Asian populations. Hence United States Federal Drug Administration (USFDA) recommends HLA-B∗15:02 screening for Asian and other populations with a high prevalence of HLA-B∗15:02,...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2016.04.001

    authors: Gunathilake KM,Wettasinghe KT,Dissanayake VH

    更新日期:2016-05-01 00:00:00

  • Tolerance: a case of self/not-self discrimination maintained by clonal deletion?

    abstract::The clonal selection theory of immune reactivity is based on a metaphor of self/not-self discrimination and considers self-tolerance to result from clonal deletion. There is evidence that a deletional mechanism is responsible for negative selection of self MHC-reactive T-cells in the thymus. Bretscher/Cohn theory buil...

    journal_title:Human immunology

    pub_type: 历史文章,杂志文章,评审

    doi:10.1016/S0198-8859(96)00294-7

    authors: Lafferty KJ,Gazda LS

    更新日期:1997-02-01 00:00:00

  • Lack of evidence of association between IFNG and IL28B polymorphisms and QuantiFERON-CMV test results in seropositive transplant patients.

    abstract::The aim of this study was to analyze the relationship between the IFNG +874 T/A and IL28B (rs12979860) C/T polymorphisms and the secretion of IFNG by CD8+ T cells after stimulation with cytomegalovirus (CMV) peptides, measured using QuantiFERON-CMV (QF-CMV) assay. A total of 184 CMV-seropositive solid organ transplant...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2018.03.009

    authors: Aguado R,Páez-Vega A,Agüera ML,Montejo M,Guirado L,Fortún J,Suárez-Benjumea A,Len O,Fariñas MC,de Gracia C,Hernández D,Cobos-Ceballos MJ,Torre-Cisneros J,Cantisán S,Spanish Network for Research in Infectious Diseases and the

    更新日期:2018-06-01 00:00:00

  • Human leukocyte antigen class I alleles and haplotypes associated with primary hepatocellular carcinoma in persistent HBV-infected patients.

    abstract::Many studies have shown that Human leukocyte antigen (HLA) class I alleles are associated with the development of various cancers. However, its role in hepatocellular carcinoma (HCC) is still unknown. To investigate whether HLA class I allelic polymorphism is related to the development of hepatitis B virus(HBV)-associ...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2013.02.007

    authors: Pan N,Chen K,Qiu J,Sun H,Xu J,Miao F,Shi Q,Jiang W,Jin H,He Y,Xie W,Zhang J

    更新日期:2013-06-01 00:00:00

  • Discordant expression of HLA class II-associated co-chaperones and HLA-DRB alleles in cultured fibroblast-like synoviocytes.

    abstract::Human leukocyte antigen (HLA)-DR-positive synovial fibroblasts are frequently observed in rheumatoid arthritis (RA) and may be implicated in the autoimmune reaction because RA is associated with certain HLA-DRB1* alleles. The question of whether components of the class II antigen presentation pathway and specific DRB ...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2004.09.005

    authors: Spurrell DR,Oldford SA,Frost T,Larsen B,Codner D,Edgecombe A,Drover S

    更新日期:2004-12-01 00:00:00

  • A 70 kDa MHC class I associated protein (MAP-70) identified as a receptor molecule for Coxsackievirus A9 cell attachment.

    abstract::One of the major categories of disease-causing micro-organisms are viruses. New studies on many different viruses have shown that virus attachment and cell entry is often a multistep process, requiring many interactions between the virus and cell surface molecules. In this study, we have attempted to identify the cell...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/s0198-8859(00)00151-8

    authors: Triantafilou M,Triantafilou K,Wilson KM

    更新日期:2000-09-01 00:00:00

  • Innate immune receptors in solid organ transplantation.

    abstract::The discovery of Pattern Recognition Receptors (PRRs) followed by that of their role in the early detection of pathogens and the ignition of the innate immune response has been a formidable progress for immunological research in the past 15years. This has massively fueled investigations aiming at developing better str...

    journal_title:Human immunology

    pub_type: 杂志文章,评审

    doi:10.1016/j.humimm.2016.04.004

    authors: Georgel P

    更新日期:2016-11-01 00:00:00

  • TLR expression, phagocytosis and oxidative burst in healthy and septic newborns in response to Gram-negative and Gram-positive rods.

    abstract::The objective was to investigate whether phagocytes from healthy and septic newborns have a developmental deficiency in their capacity to recognize, phagocytize and generate hydrogen peroxide (H2O2) in response to Escherichia coli and Staphylococcus aureus. TLR expression and phagocytic ability of neutrophils and mono...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2016.07.230

    authors: Silveira-Lessa AL,Quinello C,Lima L,Redondo ACC,Ceccon MEJR,Carneiro-Sampaio M,Palmeira P

    更新日期:2016-10-01 00:00:00

  • Higher decidual EBI3 and HLA-G mRNA expression in preeclampsia: Cause or consequence of preeclampsia.

    abstract::The maternal immune system must adapt to tolerate the invasion of the allogeneic feto-placental unit. It is generally accepted that improper adaptation causes pregnancy complications like preeclampsia. The Epstein-Barr virus-induced gene 3 (EBI3) protein is a subunit of immune-modulatory cytokines interleukin 27 (IL-2...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2015.10.004

    authors: Prins JR,van der Hoorn MLP,Keijser R,Ris-Stalpers C,van Beelen E,Afink GB,Claas FHJ,van der Post JAM,Scherjon SA

    更新日期:2016-01-01 00:00:00

  • Celiac disease--sandwiched between innate and adaptive immunity.

    abstract::Celiac disease (CD) patients are intolerant to gluten, proteins in wheat, and related cereals. Virtually all patients are human leukocyte antigen (HLA)-DQ2 or HLA-DQ8 positive and several studies have demonstrated that CD4 T cells specific for (modified) gluten peptides bound to these HLA-DQ molecules are found in pat...

    journal_title:Human immunology

    pub_type: 杂志文章,评审

    doi:10.1016/j.humimm.2006.03.011

    authors: Stepniak D,Koning F

    更新日期:2006-06-01 00:00:00

  • Description of a new HLA-E (E*01031) allele and its frequency in the Spanish population.

    abstract::An HLA-E polymorphism study by oligotyping and DNA sequencing was carried out in the Spanish population. As a result, a new HLA-E allele (E*01031) initially assigned by polymerase chain reaction oligotyping as E*0104 was found. This allele presents a synonymous change at codon 77 (AAT-->AAC; Asn) when compared with th...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/s0198-8859(97)00008-6

    authors: Gomez-Casado E,Martinez-Laso J,Vargas-Alarcón G,Varela P,Diaz-Campos N,Alvarez M,Alegre R,Arnaiz-Villena A

    更新日期:1997-04-15 00:00:00

  • Interleukin-1RN gene polymorphisms in elderly patients with rheumatic inflammatory chronic conditions: Association of IL-1RN*2/2 genotype with polymyalgia rheumatica.

    abstract::The objective of this study was to investigate whether there is an association between IL1RN polymorphism and disease susceptibility for three age-related inflammatory conditions: polymyalgia rheumatica (PMR), giant cell arteritis (GCA), and elderly-onset rheumatoid arthritis (EORA). A tandem-repeat polymorphism withi...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2008.10.011

    authors: Alvarez-Rodriguez L,Carrasco-Marin E,Lopez-Hoyos M,Mata C,Fernandez-Prieto L,Ruiz-Soto M,Calvo J,Rodriguez-Valverde V,Ruiz T,Blanco R,Corrales A,Martinez-Taboada VM

    更新日期:2009-01-01 00:00:00

  • Gorilla major histocompatibility complex-DRB pseudogene orthologous to HLA-DRBVIII.

    abstract::The HLA-DR4 haplotype consists of four DRB genes: DRB1*04, DRBVII, DRBVIII, and DRB4*01, arranged in this order on the chromosome. The DRB1 and DRB4 genes code for beta chains of the alpha beta heterodimers expressed on the cell surface and bearing the HLA-DR4 and HLA-DRw53 determinants, respectively; the DRBVII and D...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/0198-8859(91)90058-h

    authors: Klein D,Vincek V,Kasahara M,Schönbach C,O'hUigin C,Klein J

    更新日期:1991-11-01 00:00:00

  • Narcolepsy without unique MHC class II antigen association: studies in the canine model.

    abstract::Human narcolepsy is almost exclusively associated with the major histocompatibility complex (MHC) class II antigen HLA-DR2 and is the strongest HLA-disease association described to date. Canine narcolepsy resembles the human disease in its behavioral manifestations and responses to therapeutic drugs. Therefore, mixed ...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/0198-8859(89)90067-0

    authors: Dean RR,Kilduff TS,Dement WC,Grumet FC

    更新日期:1989-05-01 00:00:00

  • The association of class I HLA alleles and antibody levels after a single dose of measles vaccine.

    abstract::Despite the success of the current measles vaccine in controlling disease in industrialized countries, the importance of vaccine failure has become increasingly apparent. Our objective was to determine if associations exist between seronegativity after measles vaccination and class I human leukocyte antigen (HLA) alle...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/s0198-8859(02)00741-3

    authors: Jacobson RM,Poland GA,Vierkant RA,Pankratz VS,Schaid DJ,Jacobsen SJ,Sauver JS,Moore SB

    更新日期:2003-01-01 00:00:00

  • Analysis of the distribution of HLA-B alleles in populations from five continents.

    abstract::A two stage PCR-SSOP typing procedure, that permitted HLA-B allele assignment, was applied to DNA samples obtained from six diverse populations -Brazilian, Mexican (Series and Mestizos), Cuban (Caucasoid and Mulatto), South African Zulu, Omani, and Singapore Chinese. HLA-B allele frequencies and HLA-A/B two locus hapl...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/s0198-8859(01)00247-6

    authors: Williams F,Meenagh A,Darke C,Acosta A,Daar AS,Gorodezky C,Hammond M,Nascimento E,Middleton D

    更新日期:2001-06-01 00:00:00

  • Restriction fragment length polymorphism in HLA class II genes of Latin-American Caucasian celiac disease patients.

    abstract::In the present study Latin-American celiac disease patients were analyzed for the frequency of certain HLA class II restriction fragment length polymorphisms in order to investigate whether they exhibited the normal associated alleles or showed unusual class II variants. A DPB/RsaI 4.0-kb fragment that was shown to be...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/0198-8859(89)90005-0

    authors: Herrera M,Chertkoff L,Palavecino E,Mota A,Guala MC,Fainboim L,Satz ML

    更新日期:1989-12-01 00:00:00

  • Modulation of LILRB2 protein and mRNA expressions in septic shock patients and after ex vivo lipopolysaccharide stimulation.

    abstract::Septic patients develop immune dysfunctions, the intensities and durations of which are associated with deleterious outcomes. LILRB2 (leukocyte immunoglobulin-like receptors subfamily B, member 2), an inhibitory member of the LILR family of receptors, is known for its immunoregulatory properties. In a microarray study...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2017.03.010

    authors: Venet F,Schilling J,Cazalis MA,Demaret J,Poujol F,Girardot T,Rouget C,Pachot A,Lepape A,Friggeri A,Rimmelé T,Monneret G,Textoris J

    更新日期:2017-01-01 00:00:00

  • Lack of association of vitamin D receptor gene polymorphisms with susceptibility to type 1 diabetes mellitus in the Portuguese population.

    abstract::The vitamin D receptor (VDR) gene is a candidate gene for susceptibility to autoimmune disorders. Association studies of VDR polymorphisms and risk of type 1 diabetes often produced conflicting results in different ethnic backgrounds. The aim of this study was to test for association between common VDR polymorphisms a...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2008.01.008

    authors: Lemos MC,Fagulha A,Coutinho E,Gomes L,Bastos M,Barros L,Carrilho F,Geraldes E,Regateiro FJ,Carvalheiro M

    更新日期:2008-02-01 00:00:00

  • No association of the HLA-DQ alleles with myasthenia gravis in Cuban patients.

    abstract::Myasthenia gravis (MG) is a neuromuscular disorder characterized by fatigability and weakness of striated muscles. Its association with HLA molecules is well known and varies depending on age, sex and the ethnicity of the patients. A case-control study was performed in 61 Cuban patients and 81 controls using polymeras...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2013.04.027

    authors: Sylvia T,Samuel M,Luis G,Zuzet M

    更新日期:2013-08-01 00:00:00

  • Potential influence of interleukin-1 haplotype IL-1 beta-511*T-IL-1RN*1 in conferring low risk to middle third location of esophageal cancer: a case-control study.

    abstract::Interleukin (IL)-1 gene polymorphisms affect several inflammatory diseases, including cancer. Therefore, we studied genetic association of biallelic (-511C>T) polymorphism of IL-1 beta and 86-bp VNTR polymorphism of IL-1RN in 159 patients with esophageal cancer (EC) and 194 age- and gender-matched healthy controls. Ge...

    journal_title:Human immunology

    pub_type: 杂志文章

    doi:10.1016/j.humimm.2008.01.012

    authors: Upadhyay R,Jain M,Kumar S,Ghoshal UC,Mittal B

    更新日期:2008-03-01 00:00:00