Transcript mapping and processing of mitochondrial RNA in Dictyostelium discoideum.

Abstract:

:The circular mitochondrial genome of Dictyostelium discoideum has a size of 55,564 base pairs. We present here a complete and detailed transcription map of the mitochondrial DNA. Eight major, polycistronic transcripts encoding polypeptides, ribosomal RNAs and interspersed transfer RNAs were identified in Northern hybridization studies. Most of these polycistronic transcripts are subsequently processed into smaller mono-, di- or tricistronic RNAs. In some cases, the maturation involves endonucleolytic cleavage of the transcripts using transfer RNAs as excision signals. Primer extension experiments mapped the 5' ends of the transcripts, which may represent transcription initiation sites. Two of the polycistronic transcripts were found to be overlapping. Based on sequence alignments of the potential transcription start sites, a short oligonucleotide consensus initiation sequence has been identified which does not reveal any significant sequence homologies to known promoter regions from other organisms.

journal_name

Curr Genet

journal_title

Current genetics

authors

Barth C,Greferath U,Kotsifas M,Tanaka Y,Alexander S,Alexander H,Fisher PR

doi

10.1007/s002940100196

subject

Has Abstract

pub_date

2001-07-01 00:00:00

pages

355-64

issue

5-6

eissn

0172-8083

issn

1432-0983

journal_volume

39

pub_type

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