Abstract:
:Hydroxyproline-rich glycoproteins (HRGPs) are the major proteinaceous components of higher plant walls and the predominant components of the cell wall of the green alga Chlamydomonas reinhardtii. The GP1 protein, an HRGP of the C. reinhardtii wall, is shown to adopt a polyproline II helical configuration and to carry a complex array of arabinogalactoside residues, many branched, which are necessary to stabilize the helical conformation. The deduced GP1 amino acid sequence displays two Ser-Pro-rich domains, one with a repeating (SP)(x)() motif and the other with a repeating (PPSPX)(x)() motif. A second cloned gene a2 also carries the PPSPX repeat, defining a novel gene family in this lineage. The SP-repeat domains of GP1 form a 100-nm shaft with a flexible kink 28 nm from the head. The gp1 gene encodes a PPPPPRPPFPANTPM sequence at the calculated kink position, generating the proposal that this insert interrupts the PPII helix, with the resultant kink exposing amino acids necessary for GP1 to bind to partner molecules. It is proposed that similar kinks in the higher plant HRGPs called extensins may play a comparable role in wall assembly.
journal_name
Biochemistryjournal_title
Biochemistryauthors
Ferris PJ,Woessner JP,Waffenschmidt S,Kilz S,Drees J,Goodenough UWdoi
10.1021/bi0023605subject
Has Abstractpub_date
2001-03-06 00:00:00pages
2978-87issue
9eissn
0006-2960issn
1520-4995pii
bi0023605journal_volume
40pub_type
杂志文章相关文献
BIOCHEMISTRY文献大全abstract::Pyruvate decarboxylase (PDC) uses thiamine diphosphate as an essential cofactor to catalyze the formation of acetaldehyde on the pathway of ethanol synthesis. Here we report the crystallographic image of a prereaction intermediate of a bacterial pyruvate decarboxylase prepared by cocrystallizing the enzyme with pyruva...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi901864j
更新日期:2010-03-02 00:00:00
abstract::Comparisons of membrane glycopeptides from baby hamster kidney fibroblasts (BHK21/C13) and a clone transformed by Rous sarcoma virus (C13/B4) were made by using cells metabolically labeled with radioactive D-glucose and L-fucose. Most of the glycopeptides were metabolically labeled with both the general and the specif...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00579a015
更新日期:1979-06-12 00:00:00
abstract::Retinoids function through conformational alterations of ligand-dependent nuclear transcription factors, the retinoic acid receptors, and retinoid X receptors. 9-cis-Retinoic acid is a known biological ligand for retinoid X receptors, but its synthesis pathway in vivo is largely unknown. Recently, we identified a cis-...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi992152g
更新日期:2000-07-11 00:00:00
abstract::Most RNA molecules that are endowed with catalytic activity function in the form of ribonucleoproteins within cells. These complexes are frequently large, poorly defined, and difficult to study. As a model system to study biological catalysis by ribonucleoproteins, we have modified the hairpin ribozyme by inserting an...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00023a021
更新日期:1995-06-13 00:00:00
abstract::In this report recombinant estrogen binding protein (EBP1), isolated originally from Candida albicans as a result of its high affinity for 17beta-estradiol, has been purified extensively using a modified affinity purification scheme originally developed for a homolog of EBP1, old yellow enzyme (OYE). It is shown that ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi981106y
更新日期:1998-10-06 00:00:00
abstract::It had been reported previously that the beta2 subunit of Escherichia coli tryptophan synthetase [L-serinehydrolyase (adding indole) EC 4.2.1.20] can be cleaved by trypsin into a nearly functional dimeric protein, the monomer of which consists of two large, nonoverlapping, polypeptide fragments. In the present paper, ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00637a012
更新日期:1977-09-06 00:00:00
abstract::We have synthesized 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho(N-oleoyl)serine (N-acyl-PS) and 1,2-dioleoyl-sn-glycero-3-phospho-Tris (phosphatidyl-Tris) and have characterized both phospholipids by their chemical and chromatographic properties, as well as by their IR, 13C NMR, and 1H NMR spectra. Comparison of these d...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00221a003
更新日期:1991-02-19 00:00:00
abstract::Serine hydroxymethyltransferase (SHMT) catalyzes the reversible cleavage of serine to form glycine and single carbon groups that are essential for many biosynthetic pathways. SHMT requires both pyridoxal phosphate (PLP) and tetrahydropteroylpolyglutamate (H4PteGlun) as cofactors, the latter as a carrier of the single ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi9904151
更新日期:1999-06-29 00:00:00
abstract::Effects of different end sequences on melting, circular dichroism spectra (CD), and enzyme binding properties were investigated for four 40 base pair, non-self-complementary duplex DNA oligomers. The center sequences of these oligoduplexes have either of two 22 base pair modules flanked on both sides by sequences diff...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi000326k
更新日期:2000-07-04 00:00:00
abstract::A high molecular weight acyl coenzyme A (acyl-CoA) thioesterase, designated thioesterase II, has been purified 5300-fold from photoheterotrophically grown cells of Rhodopseudomonas sphaeroides. In contrast to R. sphaeroides acyl-CoA thioesterase I [Boyce, S.G., & Lueking, D.R. (1984) Biochemistry 23, 141-147], thioest...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00357a029
更新日期:1986-05-06 00:00:00
abstract::S-(4-Bromo-2,3-dioxobutyl)glutathione (S-BDB-G), a reactive analogue of glutathione, has been synthesized and characterized by UV spectroscopy and thin-layer chromatography, as well as by bromide and primary amine analysis. Incubation of S-BDB-G (200 microM) with the 4-4 isoenzyme of rat liver glutathione S-transferas...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00111a006
更新日期:1991-11-26 00:00:00
abstract::The photoaffinity reagent 6-azido-L-tryptophan was synthesized by chemical methods. It binds reversibly in the dark to the alpha 2 beta 2 complex of tryptophan synthase of Escherichia coli and forms a quinonoid intermediate with enzyme-bound pyridoxal phosphate (lambda max = 476 nm). The absorbance of this chromophore...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00338a031
更新日期:1985-08-13 00:00:00
abstract::One way to improve the economic feasibility of biomass conversion is to enhance the catalytic efficiency of cellulases through protein engineering. This requires that high-resolution structures of cellulases be available. Here we present the structure of E2cd, the catalytic domain of the thermophilic endocellulase E2 ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00089a006
更新日期:1993-09-28 00:00:00
abstract::Membrane-bound mammalian adenylyl cyclase isoforms contain two internally homologous cytoplasmic domains (C1 and C2). When expressed separately, C1 and C2 are catalytically inactive, but conversion of ATP to cAMP is observed if C1 and C2 are combined. By analogy with DNA polymerases, adenylyl cyclases are thought to r...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi981441m
更新日期:1998-11-17 00:00:00
abstract::Recently we demonstrated that the unique stereoelectronic relationships inherent in the structure of plasmenylethanolamine facilitate membrane fusion, and we postulated the existence of a membrane fusion protein which could exploit the propensity of plasmenylethanolamine molecular species to adapt an inverted hexagona...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00038a013
更新日期:1995-09-26 00:00:00
abstract::Prion diseases are associated with a conformational switch in the prion protein (PrP) from its normal cellular form (denoted PrP(C)) to a disease-associated "scrapie" form (PrP(Sc)). A number of PrP(Sc)-like conformations can be generated by incubating recombinant PrP(C) at low pH, indicating that protonation of key r...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi100572j
更新日期:2010-10-12 00:00:00
abstract::Factor IX activation by factor XIa is thought to proceed through the singly-cleaved free intermediate, factor IX alpha. However, we observed no intermediate development during factor IX activation by factor XIa when using a low substrate to enzyme ratio (44:1 mol/mol). This result can be explained by one of two mechan...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi962274y
更新日期:1997-04-08 00:00:00
abstract::Globotriaosylceramide [(Gal alpha 1-4Gal beta 1-4Glc-ceramide (Gb3)] was separated from human kidney, and the fatty acid composition was determined. Semisynthetic Gb3 molecular species of corresponding fatty acid chain length were prepared and compared for verotoxin (VT) binding affinity by TLC overlay, and a quantita...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00120a011
更新日期:1992-02-11 00:00:00
abstract::This report presents evidence for interdomain steps of the ligand-coupled signal transduction mechanism of the oxygen receptor from Rhizobium meliloti, RmFixL. Photolysis of the CO adducts of heme domain (RmFixLN) and heme kinase (RmFixL*) proteins allowed tracking of second-order heme CO recombination reactions by tr...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi011237q
更新日期:2001-10-30 00:00:00
abstract::The X-ray crystal structure of human soluble epoxide hydrolase (sEH) has been determined at 2.6 A resolution, revealing a domain-swapped quaternary structure identical to that observed for the murine enzyme [Argiriadi, M. A., Morisseau, C., Hammock, B. D., and Christianson, D. W. (1999) Proc. Natl. Acad. Sci. U.S.A. 9...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi036189j
更新日期:2004-04-27 00:00:00
abstract::The structure of an active mutant of (S)-mandelate dehydrogenase (MDH-GOX2) from Pseudomonas putida has been determined at 2.15 A resolution. The membrane-associated flavoenzyme (S)-mandelate dehydrogenase (MDH) catalyzes the oxidation of (S)-mandelate to give a flavin hydroquinone intermediate which is subsequently r...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi010938k
更新日期:2001-08-21 00:00:00
abstract::A simple and rapid procedure is described for purification of P-glycoprotein (Pgp) from a multidrug-resistant Chinese hamster ovary cell line (CR1R12) in which the plasma membranes are highly enriched in Pgp (Al-Shawi, M.K., Senior A.E. (1993) J. Biol. Chem, 268, 4197-4206). The procedure consisted of octylglucoside s...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00189a008
更新日期:1994-06-14 00:00:00
abstract::The respiratory chain in the cytochrome d deficient mutant Escherichia coli GR19N is a relatively simple, linear system consisting of primary dehydrogenases, ubiquinone 8, cytochrome b-556, and cytochrome o oxidase. By use of right-side-out and inside-out membrane vesicles from this strain, various oxidase activities ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00357a004
更新日期:1986-05-06 00:00:00
abstract::Neutral solutes were used to investigate the effects of osmotic stress both on the ability of rhodopsin to undergo its activating conformation change and on acyl chain packing in the rod outer segment (ROS) disk membrane. The equilibrium concentration of metarhodopsin II (MII), the conformation of photoactivated rhodo...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi990634m
更新日期:1999-06-15 00:00:00
abstract::Mg2+ is important for the RNase activity of the hammerhead ribozyme. To investigate the binding properties of Mg2+ to the hammerhead ribozyme, cleavage rates and CD spectra for substrates containing inosine or guanosine at the cleavage site were measured. The 2-amino group of this guanosine interfered with the rate of...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00235a005
更新日期:1991-05-28 00:00:00
abstract::Interleukin-8 (IL-8), a member of the chemokine superfamily, exists as both monomers and dimers, and mediates its function by binding to neutrophil CXCR1 and CXCR2 receptors that belong to the G protein-coupled receptor class. It is now well established that the monomer functions as a high-affinity ligand, but the bin...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi0605944
更新日期:2006-06-27 00:00:00
abstract::We have sought to determine the role of histone H2A phosphorylation in chromatin by examining the distribution of the phosphorylated and unphosphorylated forms of this core histone within the nuclei of mouse and human cells. At any time, only about 15% of the H2A of whole chromatin is in the phosphorylated form, and i...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00539a021
更新日期:1982-05-11 00:00:00
abstract::Differential scanning calorimetry and CD spectrometry were employed to study the thermal unfolding of light meromyosin (LMM) prepared from carp acclimated to different temperatures. The transition temperatures given by the major peaks at pH 8.0 in 0.6 M KCl for LMM from carp acclimated to 10 degrees C were 32.5 and 39...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi9701181
更新日期:1997-07-29 00:00:00
abstract::Triton X-100 solubilized monomers of bacteiorhodopsin (bR) show a decrease in the extent of light adaptation; the red shift and the absorbance increase of the visible absorption band are reduced no less than half the values observed in purple membrane (p.m.) with a corresponding reduction in the isomerization of 13-ci...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00555a043
更新日期:1980-07-08 00:00:00
abstract::The time-resolved fluorescence decay of plant PSI-LHCI has been analyzed and compared with its component parts, the PSI core and the peripheral antenna LHCI, in an attempt to (i) define the physical domains associated with the multicomponent decay-associated spectra (DAS) and determine the origin of the kinetically sl...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi060243p
更新日期:2006-06-06 00:00:00