Cost-effective screening methods for various single gene defects in single cells using high magnesium and total ionic strength and restriction enzymes.

Abstract:

:A reliable cost-effective protocol for the diagnosis of various defective genes in single blastomeres from preimplantation embryos has been established. Single cells were lysed in alkali buffer followed by neutralization and addition of a solution containing a high concentration of sulfhydryl reducing agents and MgCl(2) in relatively high ionic strength (0.45) (solution M) with or without restriction enzyme(s). The reaction mixture was incubated at 37 degrees C for 15 min followed by heat denaturation at 95 degrees C for 10 min. Respective polymerase chain reaction (PCR) mixture was then added to amplify each designated DNA region. The treatment of neutralized single cell lysate with adequate restriction enzyme(s) which do not cleave the target DNA sequences but shortens the genomic template DNA strands. This may facilitate primer-template annealing. The subsequent heat denaturation of the cell lysate in solution M indeed gave better signals of amplified DNA fragments on polyacrylamide gels. Defects in Tay Sachs exons 11 and 12, CF-DeltaF508 and CF-N1303K, and genomic sequences of ZFX/ZFY were successfully detected on gels after one-step PCR amplification, especially those cell lysates treated with restriction enzymes. In conclusion, a cost-effective one-step PCR method for amplifying various specific genomic regions containing a single gene defect in single cells has been established. This protocol may be applied to genetic screening for many single defective genes of biopsied single blastomeres from preimplantation in vitro fertilization (IVF) embryos.

journal_name

Prenat Diagn

journal_title

Prenatal diagnosis

authors

Tsai YH

doi

10.1002/1097-0223(200012)20:12<979::aid-pd966>3.0.

subject

Has Abstract

pub_date

2000-12-01 00:00:00

pages

979-85

issue

12

eissn

0197-3851

issn

1097-0223

pii

10.1002/1097-0223(200012)20:12<979::AID-PD966>3.0.

journal_volume

20

pub_type

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