Abstract:
:The Blocks Database contains multiple alignments of conserved regions in protein families which can be searched by e-mail (blocks@blocks.fhcrc.org) and World Wide Web (http://blocks.fhcrc.org/ ) servers to classify protein and nucleotide sequences. Recent enhancements to the servers include: (i) improved calculation of position-specific scoring matrices from blocks; (ii) availability of the Prints protein fingerprint database for searching in Blocks format; (iii) a representative sequence biased towards the Blocks of a protein family; (iv) a tree constructed from the Blocks of a protein family; (v) links to related World Wide Web pages for a family; and (vi) the new Local Alignment of Multiple Alignments (LAMA) method to search a block against a database of blocks.
journal_name
Nucleic Acids Resjournal_title
Nucleic acids researchauthors
Henikoff JG,Pietrokovski S,Henikoff Sdoi
10.1093/nar/25.1.222subject
Has Abstractpub_date
1997-01-01 00:00:00pages
222-5issue
1eissn
0305-1048issn
1362-4962pii
gka021journal_volume
25pub_type
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