Peptide bond synthesis catalyzed by subtilisin, papain, and pepsin.

Abstract:

:The peptide bond syntheses catalyzed by subtilisin BPN', papain [EC 3.4.22.2], and pepsin [EC 3.4.23.1] were studied comparatively at the optimum pH of the enzymes with the coupling system Cbz-(AA)n-OH + Leu-X leads to Cbz-(AA)n-Leu-X, in which AA = various amino acid residues, n = 1-3 and X = -NH2, -OEt, -OBut, -ODPM (diphenyl methyl ester) or -NH. The coupling with these enzymes differed depending upon the nature of (AA)n and X. For subtilisin-catalyzed coupling, the molecular size of the carboxyl component was most important. Thus, Cbz-Gly-Pro-Leu-OH was useful for synthesis in the presence of an equimolar concentration of Leu-NH. Either Ala-NH2 or Leu-NH2 was also useful as an amine component when present at a concentration several times that of the carboxyl component. Papain catalyzed the coupling between Cbz-AA-OH (AA = glycine, L-alanine, L-valine, L-glutamic acid, or L-phenylalanine) and Leu-X (X = -OBut and -ODPM). The coupling of Cbz-Gly-Phe-OH and Leu-X catalyzed by pepsin was markedly affected, depending upon the nature of X in the following order: -NH greater than -OBut greater than -NH2, -OEt. Leu-NH2, however, was quite efficient when its molar concentration was raised to twenty times that of the carboxyl component.

journal_name

J Biochem

journal_title

Journal of biochemistry

authors

Morihara K,Oka T

doi

10.1093/oxfordjournals.jbchem.a133213

subject

Has Abstract

pub_date

1981-02-01 00:00:00

pages

385-95

issue

2

eissn

0021-924X

issn

1756-2651

journal_volume

89

pub_type

杂志文章
  • Effect of selenite on glucocorticoid receptor.

    abstract::Rat liver glucocorticoid receptor was partially purified and characterized for its hormone binding using selenite. Selenite at very low concentrations irreversibly inhibited the hormone binding. The concentration for half maximal inhibition was approximately 2.8 microM. The inhibition was restored by dithiothreitol. T...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a122668

    authors: Tashima Y,Terui M,Itoh H,Mizunuma H,Kobayashi R,Marumo F

    更新日期:1989-03-01 00:00:00

  • Circular RNA circNINL promotes breast cancer progression through activating β-catenin signaling via miR-921/ADAM9 axis.

    abstract::We investigated the expression and functions of circular RNA (circRNA) circNINL and miR-921 in breast cancer (BC) in this study. We found that the expression of circNINL increased while the expression of miR-921 decreased in BC tissues and cell lines, and their anomalous expressions were associated with malignant feat...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/jb/mvab005

    authors: Xu C,Yu H,Yin X,Zhang J,Liu C,Qi H,Liu P

    更新日期:2021-01-21 00:00:00

  • Isolation and characterization of a monoclonal antibody against pig kidney sodium- and potassium-activated ATPase.

    abstract::A hybridoma cell line producing mouse monoclonal antibody against pig kidney Na,K-ATPase was established. The antibody, named 38 (mAb38, IgG1), was purified from mouse ascites fluid by chromatography on a protein A-Sepharose column. Antigens immobilized on microplate wells with p-benzoquinone were used for titer assay...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a135260

    authors: Urayama O,Nagamune H,Nakao M,Hara Y,Sugiyama H,Sato K,Nakao T

    更新日期:1985-07-01 00:00:00

  • Characterization of novel cysteine proteases from germinating cotyledons of soybean [Glycine max (L.) Merrill].

    abstract::The enzymatic properties of novel cysteine proteases D3-alpha and beta which were purified from germinating soybean cotyledons were investigated. The enzyme activities were exhibited in the presence of a thiol reagent, such as 2-mercaptoethanol, and apparently inhibited by E-64, a cysteine protease inhibitor. Hydrolyt...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a022448

    authors: Asano M,Suzuki S,Kawai M,Miwa T,Shibai H

    更新日期:1999-08-01 00:00:00

  • The first molecular evidence that autophagy relates rimmed vacuole formation in chloroquine myopathy.

    abstract::Chloroquine myopathy is a drug poisoning disease involving rimmed vacuole formation. By Western blot analysis, we investigated posttranslational modification of LC3 in cultured cells with a high concentration of chloroquine, and found that the autophagosome membrane-bound form of LC3 increased dose-dependently. We als...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a003147

    authors: Suzuki T,Nakagawa M,Yoshikawa A,Sasagawa N,Yoshimori T,Ohsumi Y,Nishino I,Ishiura S,Nonaka I

    更新日期:2002-05-01 00:00:00

  • On the structures of flavoprotein D-amino acid oxidase purple intermediates. A resonance Raman study.

    abstract::Resonance Raman (RR) spectra were obtained in H2O or D2O solution for the purple intermediates of D-amino acid oxidase (DAO) with isotopically labeled substrates, i.e., [1-13C]-, [2-13C]-, [3-13C]-, [15N]-, and [3,3,3-D3]alanine; [carboxyl-13C]- and [15N]proline. RR spectra were also measured for the intermediates of ...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a134552

    authors: Nishina Y,Shiga K,Miura R,Tojo H,Ohta M,Miyake Y,Yamano T,Watari H

    更新日期:1983-12-01 00:00:00

  • Drosophila melanogaster aldolase: characterization of the isozymes alpha, beta, and gamma generated from a single gene.

    abstract::Three isozymic forms, alpha, beta, and gamma, of Drosophila melanogaster aldolase are produced from a single gene by alternative usage of the triple exons 4 (4 alpha, 4 beta, and 4 gamma) [Shaw-Lee et al. (1992) J. Biol. Chem. 267, 3959-3967; Kim et al. (1992) Mol. Cell. Biol. 12, 773-783; Kai et al. (1992) J. Biochem...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a124876

    authors: Zhang R,Kai T,Sugimoto Y,Kusakabe T,Takasaki Y,Koga K,Hori K

    更新日期:1995-07-01 00:00:00

  • Proton nuclear magnetic resonance study of a selectively deuterated mouse monoclonal antibody: use of two-dimensional homonuclear Hartmann-Hahn spectroscopy.

    abstract::A 1H NMR study of a selectively deuterated mouse anti-dansyl monoclonal antibody is reported. Two-dimensional homonuclear Hartmann-Hahn (2D-HOHAHA) spectroscopy was found to be effective for establishing the connectivity between the C2-H and C4-H protons of His residues in the antibody molecule. It has been concluded ...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a122858

    authors: Kato K,Nishimura Y,Waelchli M,Arata Y

    更新日期:1989-09-01 00:00:00

  • A splicing factor, Prp8: preferential localization in the testis and ovary in adult mice.

    abstract::Prp8 is a splicing factor of 220 kDa originally identified in yeast and is a component of the U5 small nuclear ribonucleoprotein particle. Mouse Prp8 cDNA was cloned and shown to share 62.6 and 68.2% sequence identity with the yeast homologue at the amino acid and nucleotide level, respectively, while it differs by on...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a002896

    authors: Takahashi A,Muramatsu H,Takagi S,Fujisawa H,Miyake Y,Muramatsu T

    更新日期:2001-04-01 00:00:00

  • Amino acid sequence of the 203-residue fragment of the heavy chain of chicken gizzard myosin containing the SH1-type cysteine residue.

    abstract::A fluorescent fragment of Mr = 23,800 was obtained by the papain digestion of N-iodoacetyl-N'-(5-sulfo-1-naphthyl)ethylene diamine (abbreviated as IAEDANS)-modified chicken gizzard myosin. The fragment was isolated by gel filtration on a Sephadex G-100 column in the presence of 5 M guanidine-HCl followed by anion exch...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a121849

    authors: Onishi H,Maita T,Miyanishi T,Watanabe S,Matsuda G

    更新日期:1986-12-01 00:00:00

  • PqqE from Methylobacterium extorquens AM1: a radical S-adenosyl-l-methionine enzyme with an unusual tolerance to oxygen.

    abstract::Methylobacterium extorquens AM1 is an aerobic facultative methylotroph known to secrete pyrroloquinoline quinone (PQQ), a cofactor of a number of bacterial dehydrogenases, into the culture medium. To elucidate the molecular mechanism of PQQ biosynthesis, we are focusing on PqqE which is believed to be the enzyme catal...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/jb/mvv073

    authors: Saichana N,Tanizawa K,Pechoušek J,Novák P,Yakushi T,Toyama H,Frébortová J

    更新日期:2016-01-01 00:00:00

  • Urinary excretion of retinol-binding protein (RBP) in rabbit chronically poisoned with cadmium. Isolation and partial characterization of rabbit RBP.

    abstract::Studies were conducted to induce urinary excretion of retinol-binding protein (RBP) in the rabbit by long-term administration of cadmium, and to isolate and characterize rabbit RBP. Two rabbits were exposed to Cd at a dose of 0.8 and/or 1.5mg/kg of body weight by means of subcutaneous injections five times per week. O...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a131130

    authors: Muto Y,Nakanishi M,Shidoji Y

    更新日期:1976-04-01 00:00:00

  • Binding of activated macrophages to tumor cells through a macrophage lectin and its role in macrophage tumoricidal activity.

    abstract::A 45-60 kDa Gal/GalNAc-specific macrophage lectin was found to participate in the interaction between tumor cells and tumoricidal macrophages activated by an antitumor streptococcal preparation, OK-432, and in the tumoricidal activity of the activated macrophages. The binding between OK-432-elicited activated macropha...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a122763

    authors: Oda S,Sato M,Toyoshima S,Osawa T

    更新日期:1989-06-01 00:00:00

  • The structural organization of ascidian Halocynthia roretzi troponin I genes.

    abstract::The organization of troponin I (TnI) genes from the ascidian Halocynthia roretzi have been determined. Halocynthia possesses roughly two types of TnI isoforms. One type is a single-copied adult TnI (adTnI) gene, which contains eight exons and seven introns. adTnI expresses two isoforms, the shorter body wall muscle Tn...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a003191

    authors: Yuasa HJ,Kawamura K,Yamamoto H,Takagi T

    更新日期:2002-07-01 00:00:00

  • A method to determine the affinity of heparin to thrombin and antithrombin III on equilibrium gel permeation chromatography.

    abstract::Equilibrium gel permeation chromatography was employed to determine the ability of heparin to form complexes with thrombin and antithrombin III. In the eluate from a Sephacryl S-200 column, heparin caused a peak and then a trough in the fluorescence of 48 nM antithrombin III or 63 nM thrombin. The peak-heights with kn...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a134920

    authors: Oshima G,Uchiyama H,Nagasawa K

    更新日期:1984-10-01 00:00:00

  • ATP-dependent uptake of anti-neoplastic agents by acidic organelles.

    abstract::Daunomycin, an anti-neoplastic agent, is known to be sequestered by acidic organelles in normal and multidrug-resistant cells [Willingham, M.C., Cornwell, M.M., Cardarelli, C.O., Gottesman, M.M., & Pastan, I. (1986) Cancer Res. 46, 5941-5946]. We studied the mechanism of accumulation of daunomycin into acidic organell...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a124320

    authors: Moriyama Y,Manabe T,Yoshimori T,Tashiro Y,Futai M

    更新日期:1994-02-01 00:00:00

  • Structure of DNA polymerase alpha-primase complexes from mammalian cells analyzed by using monoclonal antibodies.

    abstract::The molecular masses of two of the four DNA polymerase alpha-primase complex subunit peptides from various mammalian cells have been compared through the use of specific monoclonal antibodies. One monoclonal antibody (E4) binds to 77-kDa peptide from HeLa cells and cognate peptides from other mammalian cells (monkey, ...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a123081

    authors: Kozu T,Nikaido K,Yagura T

    更新日期:1990-04-01 00:00:00

  • Interaction of Streptomyces subtilisin inhibitor (SSI) with Streptomyces griseus metallo-endopeptidase II (SGMP II).

    abstract::We have unexpectedly found that Streptomyces subtilisin inhibitor (SSI) and some other similar serine protease inhibitors produced by Streptomycetes strongly inhibit Streptomyces griseus metallo-endopeptidase II (SGMP II) [Kajiwara, K. et al. (1991) J. Biochem. 110, 350-354]. In order to elucidate the mode of their un...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a124218

    authors: Kumazaki T,Kajiwara K,Kojima S,Miura K,Ishii S

    更新日期:1993-10-01 00:00:00

  • A cytochrome o-type oxidase of the thermophilic bacterium PS3 grown under air-limited conditions.

    abstract::A cytochrome o-type oxidase from the thermophilic bacterium PS3 grown under air-limited conditions was purified by ion-exchange chromatography in the presence of a non-ionic detergent. The enzyme was composed of three subunits (60, 30, and 16 kDa) and seemed to contain two molecules of heme b as prosthetic groups. It ...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a123092

    authors: Sone N,Kutoh E,Sato K

    更新日期:1990-04-01 00:00:00

  • Cloning and characterization of phosphoglucomutase and phosphomannomutase derived from Sphingomonas chungbukensis DJ77.

    abstract::The enzymes phosphoglucomutase (PGM) and phosphomannomutase (PMM) play an important role in the synthesis of extracellular polysaccharide. By colony hybridization of the fosmid library of Sphingomonas chungbukensis DJ77, an open reading frame (ORF-1) of 1,626 nucleotides, whose predicted product is highly homologous w...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/jb/mvn094

    authors: Yoon SS,Park SH,Kim YC,Shin M,Chong CK,Choi JD

    更新日期:2008-10-01 00:00:00

  • A simple and effective method for hemolysis with a hypoxanthine-xanthine oxidase system and alteration of erythrocyte phospholipid composition during the hemolysis.

    abstract::A very rapid hemolysis was found to be caused by active oxygen species produced by a hypoxanthine-xanthine oxidase system with very low concentrations of hypoxanthine. The addition of superoxide dismutase or catalase inhibited the hemolysis, indicating that O2- and H2O2 participate in this system. The extent of erythr...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a133261

    authors: Taniguchi M,Aikawa M,Sakagami T

    更新日期:1981-03-01 00:00:00

  • The characterization of 2,3-alkanediol diacyl esters obtained from the Harderian glands of Mongolian gerbil (Meriones unguiculatus).

    abstract::A major lipid class in the Harderian glands of the Mongolian gerbil was investigated. The IR and 1H-NMR spectra suggested that it was a wax-like compound. Fatty acids present were capric, lauric, myristic, palmitic, stearic, arachidic, and behenic acids in ratios of 3.0%, 16.3%, 16.5%, 29.5%, 5.1%, 16.4%, and 9.8%, re...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a134560

    authors: Otsuru O,Otsuka H,Kasama T,Seyama Y,Sakai T,Yohro T

    更新日期:1983-12-01 00:00:00

  • Oxygen exchange reaction during ATP hydrolysis by glycerinated muscle fibers, myofibrils, and synthetic actomyosin filaments.

    abstract::The oxygen exchange during ATP hydrolysis by glycerinated muscle fibers, myofibrils, and synthetic actomyosin filaments was studied from the distribution of the [18O]Pi species produced by the hydrolysis of [gamma-18O]ATP. The products were mixtures of two species, one with a low extent of oxygen exchange and the othe...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a122718

    authors: Yasui M,Ohe M,Kajita A,Arata T,Inoue A

    更新日期:1989-04-01 00:00:00

  • ATP-induced conformational transition of denatured proteins.

    abstract::Although the conformational change occurring in proteins upon ATP binding is important in many biological reactions, the mechanism by which ATP binding induces the conformational change is unknown. We found that ATP induces acid-unfolded (pH 2) ferricytochrome c or apomyoglobin to adopt a compact structure with a sign...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a123451

    authors: Goto Y,Okamura N,Aimoto S

    更新日期:1991-05-01 00:00:00

  • Limited autolysis of Ca2+-activated neutral protease (CANP) changes its sensitivity to Ca2+ ions.

    abstract::Ca2+-activated neutral protease (CANP) usually requires mM Ca2+ for activation. The sensitivity of CANP to Ca2+ is greatly enhanced by passing it through a casein-Sepharose column in the presence of Ca2+ ions. This conversion is ascribed to autolysis of CANP. The converted enzyme required 40 microM Ca2+ for 50% activa...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a133463

    authors: Suzuki K,Tsuji S,Kubota S,Kimura Y,Imahori K

    更新日期:1981-07-01 00:00:00

  • Calphobindins (placental annexins) inhibit protein kinase C.

    abstract::Calphobindins (CPBs, placental annexins) are intracellular Ca(2+)- and phospholipid-dependent proteins like protein kinase C [EC 2.7.1.37]. We investigated the inhibitory effects of calphobindins on the protein kinase C activity in vitro. CPB I inhibited the protein kinase C activity for both histone phosphorylation a...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a123937

    authors: Shibata S,Sato H,Maki M

    更新日期:1992-10-01 00:00:00

  • Development of a novel preparation method of recombinant proteoliposomes using baculovirus gene expression systems.

    abstract::We have developed a novel method for the preparation of 'recombinant proteoliposomes'. Membrane proteins were expressed on budded virus (BV) envelopes using baculovirus gene expression systems, and proteoliposomes were prepared by fusion of these viruses with liposomes. First, plasmid DNA containing the gene for the t...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/jb/mvn125

    authors: Fukushima H,Mizutani M,Imamura K,Morino K,Kobayashi J,Okumura K,Tsumoto K,Yoshimura T

    更新日期:2008-12-01 00:00:00

  • Proteomic profiling of lipid droplet proteins in hepatoma cell lines expressing hepatitis C virus core protein.

    abstract::Hepatitis C virus (HCV) core protein has been suggested to play crucial roles in the pathogeneses of liver steatosis and hepatocellular carcinomas due to HCV infection. Intracellular HCV core protein is localized mainly in lipid droplets, in which the core protein should exert its significant biological/pathological f...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/jb/mvj104

    authors: Sato S,Fukasawa M,Yamakawa Y,Natsume T,Suzuki T,Shoji I,Aizaki H,Miyamura T,Nishijima M

    更新日期:2006-05-01 00:00:00

  • Biosynthesis of lactosylceramide and paragloboside by human lactose synthase A protein.

    abstract::Lactosylceramide and paragloboside were synthesized from their precursor glycolipids and UDP-galactose by lactose synthase A protein [UDP-Gal : GlcNAc beta-4-galactosyltransferase, EC 2.4.1.22] purified to homogeneity from human plasma. The partially purified human liver enzyme and an extract from human lymphoblastoid...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a134028

    authors: Yamato K,Yoshida A

    更新日期:1982-10-01 00:00:00

  • RNA polymerase of influenza virus. II. Influence of oligonucleotide chain length on the priming activity of RNA synthesis by virion-associated RNA polymerase.

    abstract::The virion-associated RNA-dependent RNA polymerase of influenza virus PR8 was activated by treatment with specific non-ionic detergents, and was remarkably stimulated by exogenously added oligonucleotide primers. Among synthetic oligonucleotides of various chain lengths, the dinucleotide ApG and the trinucleotide ApGp...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a133375

    authors: Kawakami K,Ishihama A,Ohtsuka E,Tanaka T,Takashima H,Ikehara M

    更新日期:1981-06-01 00:00:00