Abstract:
:The microbial community during fermented vegetable production has a large impact on the quality of the final products. Lactic acid bacteria have been well-studied in such processes, but knowledge about the roles of non-lactic acid bacteria is limited. This study aimed to provide useful knowledge about the relationships between the microbiota, including non-lactic acid bacteria, and metabolites in commercial pickle production by investigating Japanese pickles fermented in rice-bran. The samples were provided by six manufacturers, divided into two groups depending on the production conditions. The microbiological content of these samples was investigated by high-throughput sequencing, and metabolites were assessed by liquid chromatography-mass spectrometry and enzymatic assay. The data suggest that Halomonas, halophilic Gram-negative bacteria, can increase glutamic acid content during the pickling process under selective conditions for bacterial growth. In contrast, in less selective conditions, the microbiota consumed glutamic acid. Our results indicate that the glutamic acid content in fermented pickle is influenced by the microbiota, rather than by externally added glutamic acid. Our data suggest that both lactic acid bacteria and non-lactic acid bacteria are positive key factors in the mechanism of commercial vegetable fermentation and affect the quality of pickles.
journal_name
Sci Repjournal_title
Scientific reportsauthors
Sawada K,Koyano H,Yamamoto N,Yamada Tdoi
10.1038/s41598-021-81105-xsubject
Has Abstractpub_date
2021-01-19 00:00:00pages
1791issue
1issn
2045-2322pii
10.1038/s41598-021-81105-xjournal_volume
11pub_type
杂志文章abstract::Tropical deforestation is responsible for around one tenth of total anthropogenic carbon emissions, and tropical protected areas (PAs) that reduce deforestation can therefore play an important role in mitigating climate change and protecting biodiversity and ecosystem services. While the effectiveness of PAs in reduci...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-14467-w
更新日期:2017-10-25 00:00:00
abstract::gH625 constitutes a promising delivery vehicle for the transport of therapeutic biomacromolecules across membrane barriers. We report an application of multivalency to create a complex nanosystem for delivery and to elucidate the mechanism of peptide-lipid bilayer interactions. Multivalency may offer a route to enhanc...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-09001-x
更新日期:2017-08-25 00:00:00
abstract::The physical properties of polycrystalline materials depend on their microstructure, which is the nano- to centimeter scale arrangement of phases and defects in their interior. Such microstructure depends on the shape, crystallographic phase and orientation, and interfacing of the grains constituting the material. Thi...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-09717-w
更新日期:2017-08-25 00:00:00
abstract::The development of environmentally friendly plant protection products (PPPs), including pesticides, is a challenge nowadays. A commercial herbicide combining terbuthylazine and nicosulfuron as active substances (a.s.) was selected as a model PPP. The suitability of manipulating the ratio between a.s. towards alternati...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-23883-5
更新日期:2018-04-03 00:00:00
abstract::Transposable elements (TEs) are genomic sequences that can move, multiply, and often form sizable fractions of vertebrate genomes. Fish belong to a unique group of vertebrates, since their karyotypes and genome sizes are more diverse and complex, with probably higher diversity and evolution specificity of TE. To inves...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-51888-1
更新日期:2019-10-28 00:00:00
abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...
journal_title:Scientific reports
pub_type: 已发布勘误
doi:10.1038/s41598-020-60582-6
更新日期:2020-02-27 00:00:00
abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...
journal_title:Scientific reports
pub_type: 已发布勘误
doi:10.1038/s41598-020-57947-2
更新日期:2020-01-30 00:00:00
abstract::Lactobacilli are thought to be beneficial for human health, with lactobacilli-associated infections being confined to immune-compromised individuals. However, Lactobacillus fermentum AGR1487 negatively affects barrier integrity in vitro so we hypothesized that it caused a pro-inflammatory response in the host. We comp...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep20318
更新日期:2016-02-04 00:00:00
abstract::Heterogeneous catalysis, which is widely used in the chemical industry, makes a great use of supported late-transition-metal nanoparticles, and bimetallic catalysts often show superior catalytic performances as compared to their single metal counterparts. In order to optimize catalyst efficiency and discover new activ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep35226
更新日期:2016-10-14 00:00:00
abstract::Human phosphoglucomutase 1 (PGM1) is an evolutionary conserved enzyme that belongs to the ubiquitous and ancient α-D-phosphohexomutases, a large enzyme superfamily with members in all three domains of life. PGM1 catalyzes the bi-directional interconversion between α-D-glucose 1-phosphate (G1P) and α-D-glucose 6-phosph...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-62548-0
更新日期:2020-03-27 00:00:00
abstract::The probability of mitochondrial permeability transition (mPT) pore opening is inversely related to the magnitude of the proton electrochemical gradient. The module conferring sensitivity of the pore to this gradient has not been identified. We investigated mPT's voltage-sensing properties elicited by calcimycin or H2...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep26700
更新日期:2016-05-25 00:00:00
abstract::Carbon-based stationary phases for chromatographic separation have been commercially available since the 1980s. Porous graphitic carbon liquid chromatography columns are known to be highly resistant to aggressive mobile phases and extreme pH values of solvents and eluents, an important advantage compared to convention...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-33075-w
更新日期:2018-10-03 00:00:00
abstract::Cell-free enzymatic reaction cascades combine the advantages of well-established in vitro biocatalysis with the power of multi-step in vivo pathways. The absence of a regulatory cell environment enables direct process control including methods for facile bottleneck identification and process optimization. Within this ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-48151-y
更新日期:2019-08-13 00:00:00
abstract::Seven new formyl phloroglucinol meroterpenoids (FPMs), namely eucalrobusones J-P (1-7), as well as three known ones (8-10) were isolated from the leaves of Eucalyptus robusta. Their structures were elucidated by spectroscopic data analysis, and their absolute configurations were determined by applications of the Snatz...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep39815
更新日期:2016-12-22 00:00:00
abstract::Nitric oxide (NO) signaling has been studied in the eye, including in the pathophysiology of some eye diseases. While NO production by nitric oxide synthase (NOS) enzymes in the eye has been characterized, the more recently described pathways of NO generation by nitrate (NO3-) and nitrite (NO2-) ions reduction has rec...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-69272-9
更新日期:2020-08-05 00:00:00
abstract::We analysed the imaging findings of macular telangiectasia (MacTel) type 2 in Korea using spectral domain optical coherence tomography (SD-OCT) and investigated their relationship with visual acuity and clinical stages. A retrospective multicentre cross-sectional study was conducted in six tertiary hospitals in Korea ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-73803-9
更新日期:2020-10-06 00:00:00
abstract::It is well known the thermal properties of three-dimensional (3-D) hybrid graphene (GR)-carbon nanotube (CNT) structures are not superior to that of the individual GR and CNT, however, the 3-D hybrid GR-CNT structures can effectively improve the thermal properties of polymer matrix. Therefore, understanding the therma...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-14710-4
更新日期:2017-10-31 00:00:00
abstract::Lipidised analgesic peptide prodrugs self-assemble into peptide nanofibers; with the nanofiber morphology protecting the peptide from plasma degradation and improving therapeutic efficacy. Extending this learning, we hypothesised that a self-assembling lipidized peptide arginine vasopressin (AVP) receptor agonist, tha...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-64070-9
更新日期:2020-04-29 00:00:00
abstract::The majority of surveys on food webs of aquatic ecosystems have been conducted during the day owning to difficulties in sampling animals at night. In this study, to examine diurnal changes in predator-prey interactions in a temperate seagrass Zostera marina bed, a quantitative day/night survey of fish, the dominant an...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-04217-3
更新日期:2017-06-20 00:00:00
abstract::The ZIC proteins are a family of transcription regulators with a well-defined zinc finger DNA-binding domain and there is evidence that they elicit functional DNA binding at a ZIC DNA binding site. Little is known, however, regarding domains within ZIC proteins that confer trans-activation or -repression. To address t...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-69917-9
更新日期:2020-08-04 00:00:00
abstract::For accurate micro-scale quantification of a specific protein in biological fluids, immunoaffinity chromatography (IAC) and isoelectric focusing (IEF) were combined in a single fused-silica capillary. The inner wall of the capillary was coated with an anti-E-tag antibody at the inlet side to form an IAC column, and po...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep39221
更新日期:2016-12-15 00:00:00
abstract::Environmental cycles often influence the presence of animals, creating patterns at different temporal scales, which may mean that their effects overlap and/or interact. Interactions between diel and seasonal cycles have been reported to influence fish behaviour but little is known about such interactions in marine top...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-38900-4
更新日期:2019-02-22 00:00:00
abstract::Understanding the neural basis of poor impulse control in Internet addiction (IA) is important for understanding the neurobiological mechanisms of this syndrome. The current study investigated how neuronal pathways implicated in response inhibition were affected in IA using a Go-Stop paradigm and functional magnetic r...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep05027
更新日期:2014-05-22 00:00:00
abstract::Complex interactions occur between tumor and host immune system at each site in the metastatic setting, the outcome of which can determine behavior ranging from dormancy to rapid growth. An additional layer of complexity arises from the understanding that cytotoxic T cells can traffic through the host circulatory syst...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-27718-1
更新日期:2018-06-21 00:00:00
abstract::Duchenne muscular dystrophy, one of the most common lethal genetic disorders, is caused by mutations in the DMD gene and a lack of dystrophin protein. In most DMD patients and animal models, sporadic dystrophin-positive muscle fibres, called revertant fibres (RFs), are observed in otherwise dystrophin-negative backgro...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep38371
更新日期:2016-12-07 00:00:00
abstract::The present study investigates the impact of charge variants on bevacizumab's structure, stability, and biological activity. Five basic and one acidic charge variants were separated using semi-preparative cation exchange chromatography using linear pH gradient elution with purity > 85%. Based on the commercial biosimi...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-79541-2
更新日期:2021-01-29 00:00:00
abstract::Early cow-calf separation prevents much of cows' natural maternal behaviour. Early separation is thought to prevent the development of a cow-calf bond. To assess this bond, we measured motivation of dairy cows to reunite with their calf. To vary the degree of bonding, some cows were allowed continued contact with thei...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-70927-w
更新日期:2020-08-28 00:00:00
abstract::Hair cortisol concentration (HCC) is a promising measure of long-term hypothalamus-pituitary-adrenal (HPA) axis activity. Previous research has suggested an association between HCC and psychological variables, and initial studies of inter-individual variance in HCC have implicated genetic factors. However, whether HCC...
journal_title:Scientific reports
pub_type: 临床试验,杂志文章
doi:10.1038/s41598-017-11852-3
更新日期:2017-11-10 00:00:00
abstract::Although nearly one fifth of all human cancers have an infectious aetiology, the causes for the majority of cancers remain unexplained. Despite the enormous data output from high-throughput shotgun sequencing, viral DNA in a clinical sample typically constitutes a proportion of host DNA that is too small to be detecte...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep13201
更新日期:2015-08-19 00:00:00
abstract::The incidence of patients under 55 years old diagnosed with Prostate Cancer (EO-PCa) has increased during recent years. The molecular biology of PCa cancer in this group of patients remains unclear. Here, we applied weighted gene coexpression network analysis of the expression of miRNAs from 24 EO-PCa patients (38-45 ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-69290-7
更新日期:2020-07-23 00:00:00