Eco-Evolutionary Feedbacks and the Maintenance of Metacommunity Diversity in a Changing Environment.

Abstract:

:The presence and strength of resource competition can influence how organisms adaptively respond to environmental change. Selection may thus reflect a balance between two forces, adaptation to an environmental optimum and evolution to avoid strong competition. While this phenomenon has previously been explored in the context of single communities, its implications for eco-evolutionary dynamics at the metacommunity scale are largely unknown. We developed a simulation model for the evolution of a quantitative trait that influences both an organism's carrying capacity and its intra- and interspecific competitive ability. In the model, multiple species inhabit a three-patch landscape, and we investigated the effect of varying the connectivity level among patches, the presence and pace of directional environmental change, and the strength of competition between the species. Our model produced some patterns previously observed in evolving metacommunity models, such as species sorting and community monopolization. However, we found that species sorting was diminished even at low rates of dispersal and was influenced by competition strength, and that monopolization was observed only when environmental change was very rapid. We also detected an eco-evolutionary feedback loop between local phenotypic evolution at one site and competition at another site, which maintains species diversity in some conditions. The existence of a feedback loop maintained by dispersal indicates that eco-evolutionary dynamics in communities operate at a landscape scale.

journal_name

Genes (Basel)

journal_title

Genes

authors

Fielding AP,Pantel JH

doi

10.3390/genes11121433

subject

Has Abstract

pub_date

2020-11-28 00:00:00

issue

12

issn

2073-4425

pii

genes11121433

journal_volume

11

pub_type

杂志文章

相关文献

Genes文献大全
  • Characterization of the Transcriptome and Gene Expression of Brain Tissue in Sevenband Grouper (Hyporthodus septemfasciatus) in Response to NNV Infection.

    abstract::Grouper is one of the favorite sea food resources in Southeast Asia. However, the outbreaks of the viral nervous necrosis (VNN) disease due to nervous necrosis virus (NNV) infection have caused mass mortality of grouper larvae. Many aqua-farms have suffered substantial financial loss due to the occurrence of VNN. To b...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes8010031

    authors: Kim JO,Kim JO,Kim WS,Oh MJ

    更新日期:2017-01-13 00:00:00

  • Long Non-Coding RNA NEAT1 Associates with SRp40 to Temporally Regulate PPARγ2 Splicing during Adipogenesis in 3T3-L1 Cells.

    abstract::Long non-coding (lnc) RNAs serve a multitude of functions in cells. NEAT1 RNA is a highly abundant 4 kb lncRNA in nuclei, and coincides with paraspeckles, nuclear domains that control sequestration of paraspeckle proteins. We examined NEAT1 RNA levels and its function in 3T3-L1 cells during differentiation to adipocyt...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes5041050

    authors: Cooper DR,Carter G,Li P,Patel R,Watson JE,Patel NA

    更新日期:2014-11-27 00:00:00

  • Molecular Processes Connecting DNA Methylation Patterns with DNA Methyltransferases and Histone Modifications in Mammalian Genomes.

    abstract::DNA methylation is an essential part of the epigenome chromatin modification network, which also comprises several covalent histone protein post-translational modifications. All these modifications are highly interconnected, because the writers and erasers of one mark, DNA methyltransferases (DNMTs) and ten eleven tra...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes9110566

    authors: Jeltsch A,Broche J,Bashtrykov P

    更新日期:2018-11-21 00:00:00

  • DNA Damage Repair System in Plants: A Worldwide Research Update.

    abstract::Living organisms are usually exposed to various DNA damaging agents so the mechanisms to detect and repair diverse DNA lesions have developed in all organisms with the result of maintaining genome integrity. Defects in DNA repair machinery contribute to cancer, certain diseases, and aging. Therefore, conserving the ge...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes8110299

    authors: Gimenez E,Manzano-Agugliaro F

    更新日期:2017-10-30 00:00:00

  • Genomic Insights into the Carbon and Energy Metabolism of a Thermophilic Deep-Sea Bacterium Deferribacter autotrophicus Revealed New Metabolic Traits in the Phylum Deferribacteres.

    abstract::Information on the biochemical pathways of carbon and energy metabolism in representatives of the deep lineage bacterial phylum Deferribacteres are scarce. Here, we report the results of the sequencing and analysis of the high-quality draft genome of the thermophilic chemolithoautotrophic anaerobe Deferribacter autotr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10110849

    authors: Slobodkin A,Slobodkina G,Allioux M,Alain K,Jebbar M,Shadrin V,Kublanov I,Toshchakov S,Bonch-Osmolovskaya E

    更新日期:2019-10-26 00:00:00

  • An Introduction to Systems Analytics and Integration of Big Omics Data.

    abstract::A major technological shift in the research community in the past decade has been the adoption of high throughput (HT) technologies to interrogate the genome, epigenome, transcriptome, and proteome in a massively parallel fashion [...]. ...

    journal_title:Genes

    pub_type: 社论

    doi:10.3390/genes11030245

    authors: Hardiman G

    更新日期:2020-02-26 00:00:00

  • Characterization of the IS200/IS605 Insertion Sequence Family in Halanaerobium Hydrogeniformans.

    abstract::Mobile DNA elements play a significant evolutionary role by promoting genome plasticity. Insertion sequences are the smallest prokaryotic transposable elements. They are highly diverse elements, and the ability to accurately identify, annotate, and infer the full genomic impact of insertion sequences is lacking. Halan...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11050484

    authors: Sadler M,R Mormile M,L Frank R

    更新日期:2020-04-29 00:00:00

  • Comprehensive Transcriptome Profiling and Identification of Potential Genes Responsible for Salt Tolerance in Tall Fescue Leaves under Salinity Stress.

    abstract::Soil salinity is a serious threat to plant growth and crop productivity. Tall fescue utilization in saline areas is limited by its inferior salt tolerance. Thus, a transcriptome study is a prerequisite for future research aimed at providing deeper insights into the molecular mechanisms of tall fescue salt tolerance as...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9100466

    authors: Amombo E,Li X,Wang G,An S,Wang W,Fu J

    更新日期:2018-09-21 00:00:00

  • Serendipitous In Situ Conservation of Faba Bean Landraces in Tunisia: A Case Study.

    abstract::Cultivation of faba bean (Vicia faba L.) in Tunisia is largely based on improved varieties of the crop. However, a few farmers continue to produce local cultivars or landraces. The National Gene Bank of Tunisia (NGBT) recently launched a collection project for faba bean landraces, with special focus on the regions of ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11020236

    authors: Babay E,Khamassi K,Sabetta W,Miazzi MM,Montemurro C,Pignone D,Danzi D,Finetti-Sialer MM,Mangini G

    更新日期:2020-02-24 00:00:00

  • Identification of Genetic Locus Underlying Easy Dehulling in Rice-Tartary for Easy Postharvest Processing of Tartary Buckwheat.

    abstract::As a highly nutritious crop, Tartary buckwheat (Fagopyrum tartaricum) strongly adapts and grows in adverse environments and is widely grown in Asia. However, its flour contains a large proportion of the hull that adheres to the testa layer of the groats and is difficult to be removed in industrial processing. Fortunat...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11040459

    authors: Zhang L,Ma M,Liu L

    更新日期:2020-04-23 00:00:00

  • High-Throughput Genetic Testing in ALS: The Challenging Path of Variant Classification Considering the ACMG Guidelines.

    abstract::The development of high-throughput sequencing technologies and screening of big patient cohorts with familial and sporadic amyotrophic lateral sclerosis (ALS) led to the identification of a significant number of genetic variants, which are sometimes difficult to interpret. The American College of Medical Genetics and ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11101123

    authors: Lattante S,Marangi G,Doronzio PN,Conte A,Bisogni G,Zollino M,Sabatelli M

    更新日期:2020-09-24 00:00:00

  • Mechanisms of base substitution mutagenesis in cancer genomes.

    abstract::Cancer genome sequence data provide an invaluable resource for inferring the key mechanisms by which mutations arise in cancer cells, favoring their survival, proliferation and invasiveness. Here we examine recent advances in understanding the molecular mechanisms responsible for the predominant type of genetic altera...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes5010108

    authors: Bacolla A,Cooper DN,Vasquez KM

    更新日期:2014-03-05 00:00:00

  • Cortical Granule Distribution and Expression Pattern of Genes Regulating Cellular Component Size, Morphogenesis, and Potential to Differentiation are Related to Oocyte Developmental Competence and Maturational Capacity In Vivo and In Vitro.

    abstract::Polyspermia is an adverse phenomenon during mammalian fertilization when more than one sperm fuses with a single oocyte. The egg cell is prepared to prevent polyspermia by, among other ways, producing cortical granules (CGs), which are specialized intracellular structures containing enzymes that aim to harden the zona...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11070815

    authors: Kulus M,Kranc W,Jeseta M,Sujka-Kordowska P,Konwerska A,Ciesiółka S,Celichowski P,Moncrieff L,Kocherova I,Józkowiak M,Kulus J,Wieczorkiewicz M,Piotrowska-Kempisty H,Skowroński MT,Bukowska D,Machatkova M,Hanulakova S,Mozd

    更新日期:2020-07-17 00:00:00

  • Beyond junk-variable tandem repeats as facilitators of rapid evolution of regulatory and coding sequences.

    abstract::Copy Number Variations (CNVs) and Single Nucleotide Polymorphisms (SNPs) have been the major focus of most large-scale comparative genomics studies to date. Here, we discuss a third, largely ignored, type of genetic variation, namely changes in tandem repeat number. Historically, tandem repeats have been designated as...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes3030461

    authors: Gemayel R,Cho J,Boeynaems S,Verstrepen KJ

    更新日期:2012-07-26 00:00:00

  • Biodegradation of Tetralin: Genomics, Gene Function and Regulation.

    abstract::Tetralin (1,2,3,4-tetrahydonaphthalene) is a recalcitrant compound that consists of an aromatic and an alicyclic ring. It is found in crude oils, produced industrially from naphthalene or anthracene, and widely used as an organic solvent. Its toxicity is due to the alteration of biological membranes by its hydrophobic...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes10050339

    authors: Floriano B,Santero E,Reyes-Ramírez F

    更新日期:2019-05-06 00:00:00

  • Drosophila Interspecific Hybridization Causes A Deregulation of the piRNA Pathway Genes.

    abstract::Almost all eukaryotes have transposable elements (TEs) against which they have developed defense mechanisms. In the Drosophila germline, the main transposable element (TE) regulation pathway is mediated by specific Piwi-interacting small RNAs (piRNAs). Nonetheless, for unknown reasons, TEs sometimes escape cellular co...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11020215

    authors: Gámez-Visairas V,Romero-Soriano V,Martí-Carreras J,Segarra-Carrillo E,García Guerreiro MP

    更新日期:2020-02-19 00:00:00

  • Pipeline for the Rapid Development of Cytogenetic Markers Using Genomic Data of Related Species.

    abstract::Repetitive DNA including tandem repeats (TRs) is a significant part of most eukaryotic genomes. TRs include rapidly evolving satellite DNA (satDNA) that can be shared by closely related species, their abundance may be associated with evolutionary divergence, and they have been widely used for chromosome karyotyping us...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10020113

    authors: Kroupin P,Kuznetsova V,Romanov D,Kocheshkova A,Karlov G,Dang TX,Khuat TML,Kirov I,Alexandrov O,Polkhovskiy A,Razumova O,Divashuk M

    更新日期:2019-02-01 00:00:00

  • Cryptic Diversity Hidden within the Leafminer Genus Liriomyza (Diptera: Agromyzidae).

    abstract::Leafminer insects of the genus Liriomyza are small flies whose larvae feed on the internal tissue of some of the most important crop plants for the human diet. Several of these pest species are highly uniform from the morphological point of view, meaning molecular data represents the only reliable taxonomic tool usefu...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9110554

    authors: Carapelli A,Soltani A,Leo C,Vitale M,Amri M,Mediouni-Ben Jemâa J

    更新日期:2018-11-15 00:00:00

  • Versatility of Synthetic tRNAs in Genetic Code Expansion.

    abstract::Transfer RNA (tRNA) is a dynamic molecule used by all forms of life as a key component of the translation apparatus. Each tRNA is highly processed, structured, and modified, to accurately deliver amino acids to the ribosome for protein synthesis. The tRNA molecule is a critical component in synthetic biology methods f...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes9110537

    authors: Hoffman KS,Crnković A,Söll D

    更新日期:2018-11-07 00:00:00

  • Non-Random Distribution of Reciprocal Translocation Breakpoints in the Pig Genome.

    abstract::Balanced chromosome rearrangements are one of the main etiological factors contributing to hypoprolificacy in the domestic pig. Amongst domestic animals, the pig is considered to have the highest prevalence of chromosome rearrangements. To date over 200 unique chromosome rearrangements have been identified. The factor...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10100769

    authors: Donaldson B,Villagomez DAF,Revay T,Rezaei S,King WA

    更新日期:2019-09-30 00:00:00

  • Genetics of Omega-3 Long-Chain Polyunsaturated Fatty Acid Metabolism and Meat Eating Quality in Tattykeel Australian White Lambs.

    abstract::Meat eating quality with a healthy composition hinges on intramuscular fat (IMF), fat melting point (FMP), tenderness, juiciness, flavour and omega-3 long-chain polyunsaturated fatty acids (n-3 LC-PUFA) content. These health-beneficial n-3 LC-PUFA play significant roles in optimal cardiovascular, retinal, maternal and...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes11050587

    authors: Pewan SB,Otto JR,Huerlimann R,Budd AM,Mwangi FW,Edmunds RC,Holman BWB,Henry MLE,Kinobe RT,Adegboye OA,Malau-Aduli AEO

    更新日期:2020-05-25 00:00:00

  • The Role of MicroRNAs in Diabetic Complications-Special Emphasis on Wound Healing.

    abstract::Overweight and obesity are major problems in today's society, driving the prevalence of diabetes and its related complications. It is important to understand the molecular mechanisms underlying the chronic complications in diabetes in order to develop better therapeutic approaches for these conditions. Some of the mos...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes5040926

    authors: Moura J,Børsheim E,Carvalho E

    更新日期:2014-09-29 00:00:00

  • High-Throughput Incubation and Quantification of Agglutination Assays in a Microfluidic System.

    abstract::In this paper, we present a two-phase microfluidic system capable of incubating and quantifying microbead-based agglutination assays. The microfluidic system is based on a simple fabrication solution, which requires only laboratory tubing filled with carrier oil, driven by negative pressure using a syringe pump. We pr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9060281

    authors: Castro D,Conchouso D,Kodzius R,Arevalo A,Foulds IG

    更新日期:2018-06-04 00:00:00

  • Opportunities and Challenges in Interpreting and Sharing Personal Genomes.

    abstract::The 2019 "Personal Genomes: Accessing, Sharing and Interpretation" conference (Hinxton, UK, 11-12 April 2019) brought together geneticists, bioinformaticians, clinicians and ethicists to promote openness and ethical sharing of personal genome data while protecting the privacy of individuals. The talks at the conferenc...

    journal_title:Genes

    pub_type:

    doi:10.3390/genes10090643

    authors: Rubin IR,Glusman G

    更新日期:2019-08-25 00:00:00

  • Characterization, Knockdown and Parental Effect of Hexokinase Gene of Cnaphalocrocis medinalis (Lepidoptera: Pyralidae) Revealed by RNA Interference.

    abstract::Hexokinase (HK) is a key enzyme in chitin biosynthesis in insects and plays an important role in development and energy regulation. It also performs a crucial role in the synthesis of Glucose-6-phosphate and its putative functions are studied via injection of dsRNA corresponding to the hexokinase gene from Cnaphalocro...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11111258

    authors: Shakeel M,Du J,Li SW,Zhou YJ,Sarwar N,Bukhari SAH

    更新日期:2020-10-26 00:00:00

  • Cord Blood DNA Methylation Biomarkers for Predicting Neurodevelopmental Outcomes.

    abstract::Adverse environmental exposures in pregnancy can significantly alter the development of the fetus resulting in impaired child neurodevelopment. Such exposures can lead to epigenetic alterations like DNA methylation, which may be a marker of poor cognitive, motor and behavioral outcomes in the infant. Here we review st...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes7120117

    authors: Hodyl NA,Roberts CT,Bianco-Miotto T

    更新日期:2016-12-03 00:00:00

  • Combining Random Forests and a Signal Detection Method Leads to the Robust Detection of Genotype-Phenotype Associations.

    abstract::Genome wide association studies (GWAS) are a well established methodology to identify genomic variants and genes that are responsible for traits of interest in all branches of the life sciences. Despite the long time this methodology has had to mature the reliable detection of genotype-phenotype associations is still ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11080892

    authors: Ramzan F,Gültas M,Bertram H,Cavero D,Schmitt AO

    更新日期:2020-08-05 00:00:00

  • Novel Aspects on The Interaction Between Grapevine and Plasmopara viticola: Dual-RNA-Seq Analysis Highlights Gene Expression Dynamics in The Pathogen and The Plant During The Battle For Infection.

    abstract::Mgaloblishvili, a Vitis vinifera cultivar, exhibits unique resistance traits against Plasmopara viticola, the downy mildew agent. This offers the unique opportunity of exploring the molecular responses in compatible and incompatible plant-pathogen interaction. In this study, whole transcriptomes of Mgaloblishvili, Pin...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11030261

    authors: Toffolatti SL,De Lorenzis G,Brilli M,Moser M,Shariati V,Tavakol E,Maddalena G,Passera A,Casati P,Pindo M,Cestaro A,Maghradze D,Failla O,Bianco PA,Quaglino F

    更新日期:2020-02-28 00:00:00

  • Sequence Composition Underlying Centromeric and Heterochromatic Genome Compartments of the Pacific Oyster Crassostrea gigas.

    abstract::Segments of the genome enriched in repetitive sequences still present a challenge and are omitted in genome assemblies. For that reason, the exact composition of DNA sequences underlying the heterochromatic regions and the active centromeres are still unexplored for many organisms. The centromere is a crucial region o...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11060695

    authors: Tunjić Cvitanić M,Vojvoda Zeljko T,Pasantes JJ,García-Souto D,Gržan T,Despot-Slade E,Plohl M,Šatović E

    更新日期:2020-06-24 00:00:00

  • Proteomic Analysis of Methanonatronarchaeum thermophilum AMET1, a Representative of a Putative New Class of Euryarchaeota, "Methanonatronarchaeia".

    abstract::The recently discovered Methanonatronarchaeia are extremely halophilic and moderately thermophilic methyl-reducing methanogens representing a novel class-level lineage in the phylum Euryarchaeota related to the class Halobacteria. Here we present a detailed analysis of 1D-nano liquid chromatography-electrospray ioniza...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9020028

    authors: Ferrer M,Sorokin DY,Wolf YI,Ciordia S,Mena MC,Bargiela R,Koonin EV,Makarova KS

    更新日期:2018-01-23 00:00:00