Coronapp: A web application to annotate and monitor SARS-CoV-2 mutations.

Abstract:

:The avalanche of genomic data generated from the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus requires the development of tools to detect and monitor its mutations across the world. Here, we present a webtool, coronapp, dedicated to easily processing user-provided SARS-CoV-2 genomic sequences and visualizing the current worldwide status of SARS-CoV-2 mutations. The webtool allows users to highlight mutations and categorize them by frequency, country, genomic location and effect on protein sequences, and to monitor their presence in the population over time. The tool is available at http://giorgilab.unibo.it/coronannotator/ for the annotation of user-provided sequences. The full code is freely shared at https://github.com/federicogiorgi/giorgilab/tree/master/coronannotator.

journal_name

J Med Virol

authors

Mercatelli D,Triboli L,Fornasari E,Ray F,Giorgi FM

doi

10.1002/jmv.26678

subject

Has Abstract

pub_date

2020-11-18 00:00:00

eissn

0146-6615

issn

1096-9071

pub_type

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