Combining genetic markers with stable isotopes in otoliths reveals complexity in the stock structure of Atlantic bluefin tuna (Thunnus thynnus).

Abstract:

:Atlantic bluefin tuna (Thunnus thynnus) from the two main spawning populations in the Mediterranean and Gulf of Mexico occur together in the western, central and eastern Atlantic. Stock composition of catches from mixing areas is uncertain, presenting a major challenge to the sustainable management of the fisheries. This study combines genetic and chemical markers to develop an integrated method of population assignment. Stable isotope signatures (δ13C and δ18O) in the otolith core of adults from the two main spawning populations (adult baselines) showed less overlap than those of yearlings (12-18 months old) from western and eastern nursery areas suggesting that some exchange occurs towards the end of the yearling phase. The integrated model combined δ18O with four genetic markers (SNPs) to distinguish the adult baselines with greater accuracy than chemical or genetic markers alone. When used to assign individuals from the mixing areas to their population of origin, the integrated model resolved some (but not all) discrepancies between the chemistry and genetic methods. Some individuals in the mixing area had otolith δ18O values and genetic profiles which when taken together, were not representative of either population. These fish may originate from another Atlantic spawning area or may represent population contingents that move away from the main spawning areas during the first year of life. This complexity in stock structure is not captured by the current two-stock model.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Brophy D,Rodríguez-Ezpeleta N,Fraile I,Arrizabalaga H

doi

10.1038/s41598-020-71355-6

subject

Has Abstract

pub_date

2020-09-07 00:00:00

pages

14675

issue

1

issn

2045-2322

pii

10.1038/s41598-020-71355-6

journal_volume

10

pub_type

杂志文章
  • Green tide development associated with submarine groundwater discharge in a coastal harbor, Jeju, Korea.

    abstract::We measured the magnitude of submarine fresh groundwater discharge (SFGD) and associated nutrient inputs to Jocheon harbor, on Jeju Island, Korea, during four sampling periods, in order to determine the link between SFGD and Ulva sp. green tide development. Good correlations among salinity, 222Rn, and dissolved inorga...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-06711-0

    authors: Kwon HK,Kang H,Oh YH,Park SR,Kim G

    更新日期:2017-07-24 00:00:00

  • Recent Arctic tundra fire initiates widespread thermokarst development.

    abstract::Fire-induced permafrost degradation is well documented in boreal forests, but the role of fires in initiating thermokarst development in Arctic tundra is less well understood. Here we show that Arctic tundra fires may induce widespread thaw subsidence of permafrost terrain in the first seven years following the distur...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep15865

    authors: Jones BM,Grosse G,Arp CD,Miller E,Liu L,Hayes DJ,Larsen CF

    更新日期:2015-10-29 00:00:00

  • Differential DNA methylation of potassium channel KCa3.1 and immune signalling pathways is associated with infant immune responses following BCG vaccination.

    abstract::Bacillus Calmette-Guérin (BCG) is the only licensed vaccine for tuberculosis (TB) and induces highly variable protection against pulmonary disease in different countries. We hypothesised that DNA methylation is one of the molecular mechanisms driving variability in BCG-induced immune responses. DNA methylation in peri...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-31537-9

    authors: Hasso-Agopsowicz M,Scriba TJ,Hanekom WA,Dockrell HM,Smith SG

    更新日期:2018-08-30 00:00:00

  • The impact of wavelengths of LED light-therapy on endothelial cells.

    abstract::Low level light therapy receives increasing interest in the fields of tissue regeneration and wound healing. Several in vivo studies demonstrated the positive effects of LLLT on angiogenesis. This study aimed to investigate the underlying properties in vitro by comparing the effects of light therapy by light emitting ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-11061-y

    authors: Rohringer S,Holnthoner W,Chaudary S,Slezak P,Priglinger E,Strassl M,Pill K,Mühleder S,Redl H,Dungel P

    更新日期:2017-09-06 00:00:00

  • Shaping and Controlled Fragmentation of Liquid Metal Droplets through Cavitation.

    abstract::Targeting micrometer sized metal droplets with near-infrared sub-picosecond laser pulses generates intense stress-confined acoustic waves within the droplet. Spherical focusing amplifies their pressures. The rarefaction wave nucleates cavitation at the center of the droplet, which explosively expands with a repeatable...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-19140-w

    authors: Krivokorytov MS,Zeng Q,Lakatosh BV,Vinokhodov AY,Sidelnikov YV,Kompanets VO,Krivtsun VM,Koshelev KN,Ohl CD,Medvedev VV

    更新日期:2018-01-12 00:00:00

  • A Machine-learning Approach to Forecast Aggravation Risk in Patients with Acute Exacerbation of Chronic Obstructive Pulmonary Disease with Clinical Indicators.

    abstract::Patients with chronic obstructive pulmonary disease (COPD) repeat acute exacerbations (AE). Global Initiative for Chronic Obstructive Lung Disease (GOLD) is only available for patients in stable phase. Currently, there is a lack of assessment and prediction methods for acute exacerbation of chronic obstructive pulmona...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-60042-1

    authors: Peng J,Chen C,Zhou M,Xie X,Zhou Y,Luo CH

    更新日期:2020-02-20 00:00:00

  • EGFP-EGF1-conjugated poly (lactic-co-glycolic acid) nanoparticles as a carrier for the delivery of CCR2- shRNA to atherosclerotic macrophage in vitro.

    abstract::Reducing macrophage recruitment by silencing chemokine (C-C motif) receptor 2 (CCR2) expression is a promising therapeutic approach against atherosclerosis. However the transfection of macrophages with siRNA is often technically challenging. EGFP-EGF1-conjugated poly (lactic-co-glycolic acid) (PLGA) nanoparticles (ENP...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-76416-4

    authors: Wu Z,Chen C,Luo J,Davis JRJ,Zhang B,Tang L,Shi W,Liao D

    更新日期:2020-11-12 00:00:00

  • Valproate inhibits mitochondrial bioenergetics and increases glycolysis in Saccharomyces cerevisiae.

    abstract::The widely used mood stabilizer valproate (VPA) causes perturbation of energy metabolism, which is implicated in both the therapeutic mechanism of action of the drug as well as drug toxicity. To gain insight into these mechanisms, we determined the effects of VPA on energy metabolism in yeast. VPA treatment increased ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-68725-5

    authors: Salsaa M,Pereira B,Liu J,Yu W,Jadhav S,Hüttemann M,Greenberg ML

    更新日期:2020-07-16 00:00:00

  • Ubiquitin C-terminal hydrolase37 regulates Tcf7 DNA binding for the activation of Wnt signalling.

    abstract::The Tcf/Lef family of transcription factors mediates the Wnt/β-catenin pathway that is involved in a wide range of biological processes, including vertebrate embryogenesis and diverse pathogenesis. Post-translational modifications, including phosphorylation, sumoylation and acetylation, are known to be important for t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep42590

    authors: Han W,Lee H,Han JK

    更新日期:2017-02-15 00:00:00

  • A comparative analysis using flowmeter, laser-Doppler |spectrophotometry, and indocyanine green-videoangiography for detection of vascular stenosis in free flaps.

    abstract::The effects of gradual vascular occlusion on the blood supply of perfused areas are poorly described. Information relating to the comparison of flap monitoring techniques is lacking. Varying stenotic conditions (0%, 25%, 50%, 75% and 100%) were generated on purpose at the A. and V. femoralis in the rat model. Analyses...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-57777-2

    authors: Mücke T,Hapfelmeier A,Schmidt LH,Fichter AM,Kanatas A,Wolff KD,Ritschl LM

    更新日期:2020-01-22 00:00:00

  • The RIFLE versus AKIN classification for incidence and mortality of acute kidney injury in critical ill patients: A meta-analysis.

    abstract::The sensitivity and accuracy of the Risk/Injury/Failure/Loss/End-stage (RIFLE) versus acute kidney injury Network (AKIN) criteria for acute kidney injury (AKI) in critically ill patients remains uncertain. Therefore, we performed a systematic review and meta-analysis to investigate the incidence and prognostic value o...

    journal_title:Scientific reports

    pub_type: 杂志文章,meta分析

    doi:10.1038/srep17917

    authors: Xiong J,Tang X,Hu Z,Nie L,Wang Y,Zhao J

    更新日期:2015-12-07 00:00:00

  • Budgerigars adopt robust, but idiosyncratic flight paths.

    abstract::We have investigated the paths taken by Budgerigars while flying in a tunnel. The flight trajectories of nine Budgerigars (Melopsittacus undulatus) were reconstructed in 3D from high speed stereo videography of their flights in an obstacle-free tunnel. Individual birds displayed highly idiosyncratic flight trajectorie...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-59013-3

    authors: Karmaker D,Groening J,Wilson M,Schiffner I,Srinivasan MV

    更新日期:2020-02-13 00:00:00

  • An analytical approach to determine the optimal duration of continuous glucose monitoring data required to reliably estimate time in hypoglycemia.

    abstract::Diabetes is a chronic metabolic disease that causes blood glucose (BG) concentration to make dangerous excursions outside its physiological range. Measuring the fraction of time spent by BG outside this range, and, specifically, the time-below-range (TBR), is a clinically common way to quantify the effectiveness of th...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-75079-5

    authors: Camerlingo N,Vettoretti M,Facchinetti A,Sparacino G,Mader JK,Choudhary P,Del Favero S

    更新日期:2020-10-23 00:00:00

  • Kefir peptides alleviate particulate matter

    abstract::Kefir peptides, generated by kefir grain fermentation of milk proteins, showed positive antioxidant effects, lowered blood pressure and modulated the immune response. In this study, kefir peptide was evaluated regarding their anti-inflammatory effects on particulate matter <4 μm (PM4.0)-induced lung inflammation in NF...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-47872-4

    authors: Chen HL,Hung KF,Yen CC,Laio CH,Wang JL,Lan YW,Chong KY,Fan HC,Chen CM

    更新日期:2019-08-08 00:00:00

  • Effect of volatile and total intravenous anesthesia on syndecan-1 shedding after minimally invasive gastrectomy: a randomized trial.

    abstract::This study aimed to compare the effects of volatile anesthesia and total intravenous anesthesia (TIVA) on syndecan-1 shedding in patients with gastric cancer undergoing minimally invasive gastrectomy. Patients were randomly assigned to either the Volatile (n = 68) or the TIVA (n = 68) group. Anesthesia was maintained ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-021-81012-1

    authors: Kim NY,Kim KJ,Lee KY,Shin HJ,Cho J,Nam DJ,Kim SY

    更新日期:2021-01-15 00:00:00

  • Paclitaxel-loaded phosphonated calixarene nanovesicles as a modular drug delivery platform.

    abstract::A modular p-phosphonated calix[4]arene vesicle (PCV) loaded with paclitaxel (PTX) and conjugated with folic acid as a cancer targeting ligand has been prepared using a thin film-sonication method. It has a pH-responsive capacity to trigger the release of the encapsulated PTX payload under mildly acidic conditions. PTX...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep23489

    authors: Mo J,Eggers PK,Yuan ZX,Raston CL,Lim LY

    更新日期:2016-03-24 00:00:00

  • Detection of antibiotics synthetized in microfluidic picolitre-droplets by various actinobacteria.

    abstract::The natural bacterial diversity is regarded as a treasure trove for natural products. However, accessing complex cell mixtures derived from environmental samples in standardized high-throughput screenings is challenging. Here, we present a droplet-based microfluidic platform for ultrahigh-throughput screenings able to...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-31263-2

    authors: Mahler L,Wink K,Beulig RJ,Scherlach K,Tovar M,Zang E,Martin K,Hertweck C,Belder D,Roth M

    更新日期:2018-08-30 00:00:00

  • Whispering Gallery Mode Enabled Efficiency Enhancement: Defect and Size Controlled CdSe Quantum Dot Sensitized Whisperonic Solar Cells.

    abstract::A synergetic approach of employing smooth mesoporous TiO2 microsphere (SμS-TiO2)-nanoparticulate TiO2 (np-TiO2) composite photoanode, and size and defect controlled CdSe quantum dots (QD) to achieve high efficiency (η) in a modified Grätzel solar cell, quantum dot sensitized whisperonic solar cells (QDSWSC), is report...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-27969-y

    authors: Das TK,Ilaiyaraja P,Sudakar C

    更新日期:2018-06-26 00:00:00

  • Nano-volcanic Eruption of Silver.

    abstract::Silver (Ag) is one of the seven metals of antiquity and an important engineering material in the electronic, medical, and chemical industries because of its unique noble and catalytic properties. Ag thin films are extensively used in modern electronics primarily because of their oxidation-resistance. Here we report a ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep34769

    authors: Lin SK,Nagao S,Yokoi E,Oh C,Zhang H,Liu YC,Lin SG,Suganuma K

    更新日期:2016-10-05 00:00:00

  • Optimal crosstalk suppression in multicore fibers.

    abstract::We study propagation in a cyclic symmetric multicore fiber where the core radii randomly fluctuate along the propagation direction. We propose a hybrid analytic-numerical method to optimize the amplitude and frequency of the fluctuations that suppress power transfer between outer and inner cores. This framework allows...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-51854-x

    authors: Jaramillo Ávila B,Torres JM,León-Montiel RJ,Rodríguez-Lara BM

    更新日期:2019-10-31 00:00:00

  • Machine Learning Approach to find the relation between Endometriosis, benign breast disease, cystitis and non-toxic goiter.

    abstract::The exact mechanism of endometriosis is unknown. The recommendation system (RS) based on item similarities of machine learning has never been applied to the relationship between diseases. The study aim was to identify diseases associated with endometriosis by applying RS based on item similarities to insurance data in...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-41973-w

    authors: Lee JH,Kwon SY,Chang J,Yuk JS

    更新日期:2019-04-01 00:00:00

  • Why one-size-fits-all vaso-modulatory interventions fail to control glioma invasion: in silico insights.

    abstract::Gliomas are highly invasive brain tumours characterised by poor prognosis and limited response to therapy. There is an ongoing debate on the therapeutic potential of vaso-modulatory interventions against glioma invasion. Prominent vasculature-targeting therapies involve tumour blood vessel deterioration and normalisat...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep37283

    authors: Alfonso JC,Köhn-Luque A,Stylianopoulos T,Feuerhake F,Deutsch A,Hatzikirou H

    更新日期:2016-11-23 00:00:00

  • Sensitive, Real-time and Non-Intrusive Detection of Concentration and Growth of Pathogenic Bacteria using Microfluidic-Microwave Ring Resonator Biosensor.

    abstract::Infection diagnosis and antibiotic susceptibility testing (AST) are time-consuming and often laborious clinical practices. This paper presents a microwave-microfluidic biosensor for rapid, contactless and non-invasive device for testing the concentration and growth of Escherichia Coli (E. Coli) in medium solutions of ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-34001-w

    authors: Narang R,Mohammadi S,Ashani MM,Sadabadi H,Hejazi H,Zarifi MH,Sanati-Nezhad A

    更新日期:2018-10-25 00:00:00

  • Plastic flow anisotropy drives shear fracture.

    abstract::Fracture of initially crack-free bodies often occurs due to plastic instabilities known as shear bands. Previous computer simulations advanced a myriad of mechanisms to rationalize shear banding. However, they were restricted to planar geometries. We investigate the relevance of anisotropic plasticity by picking an ax...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-38437-y

    authors: Benzerga AA,Thomas N,Herrington JS

    更新日期:2019-02-05 00:00:00

  • Capillary isoelectric focusing after sample enrichment with immunoaffinity chromatography in a single capillary.

    abstract::For accurate micro-scale quantification of a specific protein in biological fluids, immunoaffinity chromatography (IAC) and isoelectric focusing (IEF) were combined in a single fused-silica capillary. The inner wall of the capillary was coated with an anti-E-tag antibody at the inlet side to form an IAC column, and po...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep39221

    authors: Shimura K,Nagai T

    更新日期:2016-12-15 00:00:00

  • Phaeophleospora vochysiae Savi & Glienke sp. nov. Isolated from Vochysia divergens Found in the Pantanal, Brazil, Produces Bioactive Secondary Metabolites.

    abstract::Microorganisms associated with plants are highly diverse and can produce a large number of secondary metabolites, with antimicrobial, anti-parasitic and cytotoxic activities. We are particularly interested in exploring endophytes from medicinal plants found in the Pantanal, a unique and widely unexplored wetland in Br...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-21400-2

    authors: Savi DC,Shaaban KA,Gos FMWR,Ponomareva LV,Thorson JS,Glienke C,Rohr J

    更新日期:2018-02-15 00:00:00

  • Controlled mud-crack patterning and self-organized cracking of polydimethylsiloxane elastomer surfaces.

    abstract::Exploiting pattern formation - such as that observed in nature - in the context of micro/nanotechnology could have great benefits if coupled with the traditional top-down lithographic approach. Here, we demonstrate an original and simple method to produce unique, localized and controllable self-organised patterns on e...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep14787

    authors: Seghir R,Arscott S

    更新日期:2015-10-06 00:00:00

  • MicroRNA-196b inhibits late apoptosis of pancreatic cancer cells by targeting CADM1.

    abstract::Pancreatic cancer (PC), as the leading cause of cancer death worldwide, is one of the deadliest tumors with a very low 5-year survival rate. Therefore, it is urgent to seek new biomarkers of PC for more accurate and reliable treatments. To identify the differentially expressed miRNAs (DEM) in PC tissues, we performed ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-11248-3

    authors: Wang HL,Zhou R,Liu J,Chang Y,Liu S,Wang XB,Huang MF,Zhao Q

    更新日期:2017-09-13 00:00:00

  • Orchid Bsister gene PeMADS28 displays conserved function in ovule integument development.

    abstract::The ovules and egg cells are well developed to be fertilized at anthesis in many flowering plants. However, ovule development is triggered by pollination in most orchids. In this study, we characterized the function of a Bsister gene, named PeMADS28, isolated from Phalaenopsis equestris, the genome-sequenced orchid. S...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-79877-9

    authors: Shen CY,Chen YY,Liu KW,Lu HC,Chang SB,Hsiao YY,Yang F,Zhu G,Zou SQ,Huang LQ,Liu ZJ,Tsai WC

    更新日期:2021-01-13 00:00:00

  • Identification of the catalytic triad of family S46 exopeptidases, closely related to clan PA endopeptidases.

    abstract::The exopeptidases of family S46 are exceptional, as the closest homologs of these enzymes are the endopeptidases of clan PA. The three-dimensional structure of S46 enzymes is unknown and only one of the catalytic residues, the serine, has been identified. The catalytic histidine and aspartate residues are not experime...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep04292

    authors: Suzuki Y,Sakamoto Y,Tanaka N,Okada H,Morikawa Y,Ogasawara W

    更新日期:2014-03-06 00:00:00