Rapid Detection of Nocardia by Next-Generation Sequencing.

Abstract:

:In this original study, we retrospectively reviewed the cases of nocardiosis diagnosed through culture and next-generation sequencing (NGS) methods between 2014 and 2018 in Huashan Hospital and found out that the latter way can not only improve the detection rate of Nocardia spp. but also greatly reduce the turnaround time. In addition, by comparing nocardiosis and non-nocardiosis patients both of whose samples had Nocardia spp. detected by NGS, we found that Nocardia's specific reads ranking among top two might be a satisfactory cutoff value for clinical diagnosis of the disease. Our study introduced the promising value of the NGS method in the rapid diagnosis of nocardiosis.

authors

Weng SS,Zhang HY,Ai JW,Gao Y,Liu YY,Xu B,Zhang WH

doi

10.3389/fcimb.2020.00013

subject

Has Abstract

pub_date

2020-02-18 00:00:00

pages

13

issn

2235-2988

journal_volume

10

pub_type

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