Promotion of Hyperthermic-Induced rDNA Hypercondensation in Saccharomyces cerevisiae.

Abstract:

:Ribosome biogenesis is tightly regulated through stress-sensing pathways that impact genome stability, aging and senescence. In Saccharomyces cerevisiae, ribosomal RNAs are transcribed from rDNA located on the right arm of chromosome XII. Numerous studies reveal that rDNA decondenses into a puff-like structure during interphase, and condenses into a tight loop-like structure during mitosis. Intriguingly, a novel and additional mechanism of increased mitotic rDNA compaction (termed hypercondensation) was recently discovered that occurs in response to temperature stress (hyperthermic-induced) and is rapidly reversible. Here, we report that neither changes in condensin binding or release of DNA during mitosis, nor mutation of factors that regulate cohesin binding and release, appear to play a critical role in hyperthermic-induced rDNA hypercondensation. A candidate genetic approach revealed that deletion of either HSP82 or HSC82 (Hsp90 encoding heat shock paralogs) result in significantly reduced hyperthermic-induced rDNA hypercondensation. Intriguingly, Hsp inhibitors do not impact rDNA hypercondensation. In combination, these findings suggest that Hsp90 either stabilizes client proteins, which are sensitive to very transient thermic challenges, or directly promotes rDNA hypercondensation during preanaphase. Our findings further reveal that the high mobility group protein Hmo1 is a negative regulator of mitotic rDNA condensation, distinct from its role in promoting premature condensation of rDNA during interphase upon nutrient starvation.

journal_name

Genetics

journal_title

Genetics

authors

Shen D,Skibbens RV

doi

10.1534/genetics.119.302994

subject

Has Abstract

pub_date

2020-03-01 00:00:00

pages

589-604

issue

3

eissn

0016-6731

issn

1943-2631

pii

genetics.119.302994

journal_volume

214

pub_type

杂志文章

相关文献

GENETICS文献大全
  • Mutations in SIN4 and RGR1 cause constitutive expression of MAL structural genes in Saccharomyces cerevisiae.

    abstract::Transcription of the Saccharomyces MAL structural genes is induced 40-fold by maltose and requires the MAL-activator and maltose permease. To identify additional players involved in regulating MAL gene expression, we carried out a genetic selection for MAL constitutive mutants. Strain CMY4000 containing MAL1 and integ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.029611

    authors: Wang X,Michels CA

    更新日期:2004-10-01 00:00:00

  • Context dependence of meiotic recombination hotspots in yeast: the relationship between recombination activity of a reporter construct and base composition.

    abstract::Borde and colleagues reported that a reporter plasmid inserted at different genomic locations in Saccharomyces cerevisiae had different levels of meiotic recombination activity. We show that the level of recombination activity is very significantly correlated with the GC content of DNA sequences flanking the insertion...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Petes TD,Merker JD

    更新日期:2002-12-01 00:00:00

  • Impact of Chromosome Fusions on 3D Genome Organization and Gene Expression in Budding Yeast.

    abstract::The three-dimensional (3D) organization of chromosomes can influence transcription. However, the frequency and magnitude of these effects remain debated. To determine how changes in chromosome positioning affect transcription across thousands of genes with minimal perturbation, we characterized nuclear organization an...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.119.302978

    authors: Di Stefano M,Di Giovanni F,Pozharskaia V,Gomar-Alba M,Baù D,Carey LB,Marti-Renom MA,Mendoza M

    更新日期:2020-03-01 00:00:00

  • Transposition of Ac from the P locus of maize into unreplicated chromosomal sites.

    abstract::We have analyzed donor and target sites of the mobile element Activator (Ac) that are altered as a result of somatic transposition from the P locus in maize. Previous genetic analysis has indicated that the two mitotic daughter lineages which result from Ac transposition from P differ in their Ac constitution at the P...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Chen J,Greenblatt IM,Dellaporta SL

    更新日期:1987-09-01 00:00:00

  • Cell polarity in Saccharomyces cerevisiae depends on proper localization of the Bud9 landmark protein by the EKC/KEOPS complex.

    abstract::In diploid Saccharomyces cerevisiae cells, bud-site selection is determined by two cortical landmarks, Bud8p and Bud9p, at the distal and proximal poles, respectively. Their localizations depend on the multigenerational proteins Rax1p/Rax2p. Many genes involved in bud-site selection were identified previously by genom...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.111.128231

    authors: Kato Y,Kawasaki H,Ohyama Y,Morishita T,Iwasaki H,Kokubo T,Hirano H

    更新日期:2011-08-01 00:00:00

  • Degradation of functional triose phosphate isomerase protein underlies sugarkill pathology.

    abstract::Triose phosphate isomerase (TPI) deficiency glycolytic enzymopathy is a progressive neurodegenerative condition that remains poorly understood. The disease is caused exclusively by specific missense mutations affecting the TPI protein and clinically features hemolytic anemia, adult-onset neurological impairment, degen...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.108.087551

    authors: Seigle JL,Celotto AM,Palladino MJ

    更新日期:2008-06-01 00:00:00

  • Partial diploidization of meiosis in autotetraploid Arabidopsis thaliana.

    abstract::Meiosis was analyzed cytogenetically in autotetraploids of Arabidopsis, including both established lines and newly generated autotetraploid plants. Fluorescent in situ hybridization with 5S and 45S rDNA probes was used to identify the different chromosomes at metaphase I of meiosis. Multivalents were observed frequent...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Santos JL,Alfaro D,Sanchez-Moran E,Armstrong SJ,Franklin FC,Jones GH

    更新日期:2003-11-01 00:00:00

  • Genetic analysis of variation in gene expression in Arabidopsis thaliana.

    abstract::In Arabidopsis thaliana, significant efforts to determine the extent of genomic variation between phenotypically divergent accessions are under way, but virtually nothing is known about variation at the transcription level. We used microarrays to examine variation in transcript abundance among three inbred lines and t...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.105.041509

    authors: Vuylsteke M,van Eeuwijk F,Van Hummelen P,Kuiper M,Zabeau M

    更新日期:2005-11-01 00:00:00

  • Natural selection and age-structured populations.

    abstract::This paper studies the properties of a new class of demographic parameters for age-structured populations and analyzes the effect of natural selection on these parameters. Two new demographic variables are introduced: the entropy of a population and the reproductive potential. The entropy of a population measures the ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Demetrius L

    更新日期:1975-03-01 00:00:00

  • The genetic structure of natural populations of Drosophila melanogaster. XXIV. Effects of hybrid dysgenesis on the components of genetic variance of variability.

    abstract::Eight hundred second chromosomes were extracted from the Ishigakijima population, one of the southernmost populations of Drosophila melanogaster in Japan. Half of them were extracted in Native cytoplasm (P-type), and half in Foreign cytoplasm (M-type). Various population-genetic parameters, including the frequency of ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Suh DS,Mukai T

    更新日期:1991-03-01 00:00:00

  • Mutations causing transformation of sexual phenotype in the nematode Caenorhabditis elegans.

    abstract::Ten mutations are described that transform genotypic hermaphrodites of the nematode Caenorhabditis elegans into phenotypic males. These fall into three autosomal complementation groups, termed tra-1, tra-2, and tra-3. Two alleles of tra-1 produce almost complete transformation, to a fertile male phenotype; such transf...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Hodgkin JA,Brenner S

    更新日期:1977-06-01 00:00:00

  • Sexual transmission of transposed activator elements in transgenic tomatoes.

    abstract::The transmission of transposed Ac elements in progeny derived by self-pollination of ten transformed tomato plants has been examined by Southern hybridization analysis. We show that six of these primary transformants have transmitted a transposed Ac to at least one progeny. One of the families was segregating for at l...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Belzile F,Lassner MW,Tong Y,Khush R,Yoder JI

    更新日期:1989-09-01 00:00:00

  • On the interpretation of mutagenically induced mosaicism in Drosophila.

    abstract::This paper draws attention to the formal parallelism that exists between chromosomal-loss mosaicism and mutagenically induced mosaicism in Drosophila and suggests that, although the underlying processes by which these two types of genetic mosaics are generated are very different, the more refined methodology employed ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Nissani M

    更新日期:1977-08-01 00:00:00

  • Genetic and bioinformatic analysis of 41C and the 2R heterochromatin of Drosophila melanogaster: a window on the heterochromatin-euchromatin junction.

    abstract::Genomic sequences provide powerful new tools in genetic analysis, making it possible to combine classical genetics with genomics to characterize the genes in a particular chromosome region. These approaches have been applied successfully to the euchromatin, but analysis of the heterochromatin has lagged somewhat behin...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.166.2.807

    authors: Myster SH,Wang F,Cavallo R,Christian W,Bhotika S,Anderson CT,Peifer M

    更新日期:2004-02-01 00:00:00

  • Efficiency of the use of pedigree and molecular marker information in conservation programs.

    abstract::The value of molecular markers and pedigree records, separately or in combination, to assist in the management of conserved populations has been tested. The general strategy for managing the population was to optimize contributions of parents to the next generation for minimizing the global weighted coancestry. Strate...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.037325

    authors: Fernández J,Villanueva B,Pong-Wong R,Toro MA

    更新日期:2005-07-01 00:00:00

  • Challenges of detecting directional selection after a bottleneck: lessons from Sorghum bicolor.

    abstract::Multilocus surveys of sequence variation can be used to identify targets of directional selection, which are expected to have reduced levels of variation. Following a population bottleneck, the signal of directional selection may be hard to detect because many loci may have low variation by chance and the frequency sp...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.105.054312

    authors: Hamblin MT,Casa AM,Sun H,Murray SC,Paterson AH,Aquadro CF,Kresovich S

    更新日期:2006-06-01 00:00:00

  • Genetic and molecular analysis of a tRNA(Leu) missense suppressor of nudC3, a mutation that blocks nuclear migration in Aspergillus nidulans.

    abstract::NudC encodes a protein of unknown biochemical function that is required for nuclear migration. In an attempt to define its function by identifying interacting proteins, a screen for extragenic suppressors of the temperature-sensitive nudC3 mutation was undertaken that identified nine snc genes. Here we demonstrate tha...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Chiu YH,Morris NR

    更新日期:1997-03-01 00:00:00

  • Drosophila signal peptide peptidase is an essential protease for larval development.

    abstract::We identified the Drosophila melanogaster Signal peptide peptidase gene (Spp) that encodes a multipass transmembrane aspartyl protease. Drosophila SPP is homologous to the human signal peptide peptidase (SPP) and is distantly related to the presenilins. We show that, like human SPP, Drosophila SPP can proteolyze a mod...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.039933

    authors: Casso DJ,Tanda S,Biehs B,Martoglio B,Kornberg TB

    更新日期:2005-05-01 00:00:00

  • The neutral coalescent process for recent gene duplications and copy-number variants.

    abstract::I describe a method for simulating samples from gene families of size two under a neutral coalescent process, for the case where the duplicate gene either has fixed recently in the population or is still segregating. When a duplicate locus has recently fixed by genetic drift, diversity in the new gene is expected to b...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.107.074948

    authors: Thornton KR

    更新日期:2007-10-01 00:00:00

  • Hairpin-tail: a case of post-reductional gene action in the mouse egg.

    abstract::Hairpin-tail (T(hp)) is a new allele of brachyury on chromosome 17 (linkage group IX) of the mouse. The morphological effects in the heterozygote are on the notochord and the tail. The homozygous abnormal is unknown. T(hp) is unique in that the phenotype of the heterozygote seems to depend on the source of the T(hp) g...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: JOHNSON DR

    更新日期:1974-04-01 00:00:00

  • Wolbachia infection and cytoplasmic incompatibility in Drosophila species.

    abstract::Forty-one stocks from 30 Drosophila species were surveyed for Wolbachia infection using PCR technology. D. sechellia and two strains of D. auraria were found to be infected and were tested for the expression of cytoplasmic incompatibility, along with D. ananassae and D. melanogaster strains, which are already known to...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Bourtzis K,Nirgianaki A,Markakis G,Savakis C

    更新日期:1996-11-01 00:00:00

  • Nucleosomes Are Essential for Proper Regulation of a Multigated Promoter in Saccharomyces cerevisiae.

    abstract::Nucleosome-depleted regions (NDRs) are present immediately adjacent to the transcription start site in most eukaryotic promoters. Here we show that NDRs in the upstream promoter region can profoundly affect gene regulation. Chromatin at the yeast HO promoter is highly repressive and numerous coactivators are required ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.183715

    authors: Yarrington RM,Goodrum JM,Stillman DJ

    更新日期:2016-02-01 00:00:00

  • Differentiation of Muller's chromosomal elements D and E in the obscura group of Drosophila.

    abstract::Twenty-two markers located on Muller's elements D or E have been mapped by in situ hybridization in six species of the obscura group of Drosophila and in D. melanogaster. The obscura species can be grouped into a Palearctic cluster (D. subobscura, D. madeirensis and D. guanche) and a Nearctic one (D. pseudoobscura, D....

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Segarra C,Ribó G,Aguadé M

    更新日期:1996-09-01 00:00:00

  • Twenty-Seven Tamoxifen-Inducible iCre-Driver Mouse Strains for Eye and Brain, Including Seventeen Carrying a New Inducible-First Constitutive-Ready Allele.

    abstract::To understand gene function, the cre/loxP conditional system is the most powerful available for temporal and spatial control of expression in mouse. However, the research community requires more cre recombinase expressing transgenic mouse strains (cre-drivers) that restrict expression to specific cell types. To addres...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.119.301984

    authors: Korecki AJ,Hickmott JW,Lam SL,Dreolini L,Mathelier A,Baker O,Kuehne C,Bonaguro RJ,Smith J,Tan CV,Zhou M,Goldowitz D,Deussing JM,Stewart AF,Wasserman WW,Holt RA,Simpson EM

    更新日期:2019-04-01 00:00:00

  • On the Identifiability of Transmission Dynamic Models for Infectious Diseases.

    abstract::Understanding the transmission dynamics of infectious diseases is important for both biological research and public health applications. It has been widely demonstrated that statistical modeling provides a firm basis for inferring relevant epidemiological quantities from incidence and molecular data. However, the comp...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.180034

    authors: Lintusaari J,Gutmann MU,Kaski S,Corander J

    更新日期:2016-03-01 00:00:00

  • Variation after a selective sweep in a subdivided population.

    abstract::The effect of genetic hitchhiking on neutral variation is analyzed in subdivided populations with differentiated demes. After fixation of a favorable mutation, the consequences on particular subpopulations can be radically different. In the subpopulation where the mutation first appeared by mutation, variation at link...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.032813

    authors: Santiago E,Caballero A

    更新日期:2005-01-01 00:00:00

  • Genetic instability within monotonous runs of CpG sequences in Escherichia coli.

    abstract::Genetic information can be altered by base substitutions, frameshift mutations, and addition or deletion of nucleotides. Deletions represent an important class of genetic aberration occurring at DNA sequences where it is often possible to predict the existence of intermediates of mutation. Instability within tracts of...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Bichara M,Schumacher S,Fuchs RP

    更新日期:1995-07-01 00:00:00

  • Gene differences between the sex ratio and standard gene arrangements of the X chromosome and linkage disequilibrium between loci in the standard gene Drosophila pseudoobscura.

    abstract::The Standard and Sex Ratio gene arrangements of the X chromosome of D. pseudobscura differ from each other in allele frequencies at the four X chromosome loci, esterase-5, adult acid phosphatase-6, phosphoglucomutase-1 and octanol dehydrogenase-3. The Standard arrangement which is the common arrangement in all populat...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Prakash S

    更新日期:1974-08-01 00:00:00

  • Promoter Proximal Pausing Limits Tumorous Growth Induced by the Yki Transcription Factor in Drosophila.

    abstract::Promoter proximal pausing (PPP) of RNA polymerase II has emerged as a crucial rate-limiting step in the regulation of gene expression. Regulation of PPP is brought about by complexes 7SK snRNP, P-TEFb (Cdk9/cycT), and the negative elongation factor (NELF), which are highly conserved from Drosophila to humans. Here, we...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.120.303419

    authors: Nagarkar S,Wasnik R,Govada P,Cohen S,Shashidhara LS

    更新日期:2020-09-01 00:00:00

  • Chromatin organization and remodeling of interstitial telomeric sites during meiosis in the Mongolian gerbil (Meriones unguiculatus).

    abstract::Telomeric DNA repeats are key features of chromosomes that allow the maintenance of integrity and stability in the telomeres. However, interstitial telomere sites (ITSs) can also be found along the chromosomes, especially near the centromere, where they may appear following chromosomal rearrangements like Robertsonian...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.166421

    authors: de la Fuente R,Manterola M,Viera A,Parra MT,Alsheimer M,Rufas JS,Page J

    更新日期:2014-08-01 00:00:00