Population Structure and Genetic Diversity among Isolates of Coccidioides posadasii in Venezuela and Surrounding Regions.

Abstract:

:Coccidioides posadasii is a pathogenic fungus that causes coccidioidomycosis in many arid regions of the Americas. One of these regions is bordered by the Caribbean Sea, and the surrounding landscape may play an important role in the dispersion of C. posadasii across South America through southeastern Mexico, Honduras, Guatemala, and Venezuela. Comparative phylogenomic analyses of C. posadasii reveal that clinical strains from Venezuela are genetically distinct from the North American populations found in (i) Arizona and (ii) Texas, Mexico, and the rest of South America (TX/MX/SA). We find evidence for admixture between the Venezuela and the North American populations of C. posadasii in Central America. Additionally, the proportion of Venezuelan alleles in the admixed population decreases as latitude (and distance from Venezuela) increases. Our results indicate that the population in Venezuela may have been subjected to a recent bottleneck and shows a strong population structure. This analysis provides insight into potential for Coccidioides spp. to invade new regions.IMPORTANCE Valley Fever is a fungal disease caused by two species of fungi: Coccidioides immitis and C. posadasii These fungi are found throughout the arid regions of North and South America; however, our understanding of genetic diversity and disease in South America is limited. In this report, we analyze 10 new genomes of Coccidioides posadasii from regions bordering the Caribbean Sea. We show that these populations are distinct and that isolates from Venezuela are likely a result of a recent bottleneck. These data point to patterns that might be observed when investigating recently established populations.

journal_name

mBio

journal_title

mBio

authors

Teixeira MM,Alvarado P,Roe CC,Thompson GR 3rd,Patané JSL,Sahl JW,Keim P,Galgiani JN,Litvintseva AP,Matute DR,Barker BM

doi

10.1128/mBio.01976-19

subject

Has Abstract

pub_date

2019-11-26 00:00:00

issue

6

issn

2150-7511

pii

mBio.01976-19

journal_volume

10

pub_type

杂志文章

相关文献

mBio文献大全
  • A Burkholderia pseudomallei colony variant necessary for gastric colonization.

    abstract:UNLABELLED:Diverse colony morphologies are a hallmark of Burkholderia pseudomallei recovered from infected patients. We observed that stresses that inhibit aerobic respiration shifted populations of B. pseudomallei from the canonical white colony morphotype toward two distinct, reversible, yet relatively stable yellow ...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.02462-14

    authors: Austin CR,Goodyear AW,Bartek IL,Stewart A,Sutherland MD,Silva EB,Zweifel A,Vitko NP,Tuanyok A,Highnam G,Mittelman D,Keim P,Schweizer HP,Vázquez-Torres A,Dow SW,Voskuil MI

    更新日期:2015-02-03 00:00:00

  • Viral Diversity of House Mice in New York City.

    abstract::The microbiome of wild Mus musculus (house mouse), a globally distributed invasive pest that resides in close contact with humans in urban centers, is largely unexplored. Here, we report analysis of the fecal virome of house mice in residential buildings in New York City, NY. Mice were collected at seven sites in Manh...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.01354-17

    authors: Williams SH,Che X,Garcia JA,Klena JD,Lee B,Muller D,Ulrich W,Corrigan RM,Nichol S,Jain K,Lipkin WI

    更新日期:2018-04-17 00:00:00

  • Offloading Role of a Discrete Thioesterase in Type II Polyketide Biosynthesis.

    abstract::Type II polyketides are a group of secondary metabolites with various biological activities. In nature, biosynthesis of type II polyketides involves multiple enzymatic steps whereby key enzymes, including ketoacyl-synthase (KSα), chain length factor (KSβ), and acyl carrier protein (ACP), are utilized to elongate the p...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.01334-20

    authors: Hua K,Liu X,Zhao Y,Gao Y,Pan L,Zhang H,Deng Z,Jiang M

    更新日期:2020-09-15 00:00:00

  • On the Emergence of Cryptococcus gattii in the Pacific Northwest: Ballast Tanks, Tsunamis, and Black Swans.

    abstract::The appearance of Cryptococcus gattii in the North American Pacific Northwest (PNW) in 1999 was an unexpected and is still an unexplained event. Recent phylogenomic analyses strongly suggest that this pathogenic fungus arrived in the PNW approximately 7 to 9 decades ago. In this paper, we theorize that the ancestors o...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.02193-19

    authors: Engelthaler DM,Casadevall A

    更新日期:2019-10-01 00:00:00

  • Cathelicidin Antimicrobial Peptides with Reduced Activation of Toll-Like Receptor Signaling Have Potent Bactericidal Activity against Colistin-Resistant Bacteria.

    abstract:UNLABELLED:The world is at the precipice of a postantibiotic era in which medical procedures and minor injuries can result in bacterial infections that are no longer effectively treated by antibiotics. Cathelicidins are peptides produced by animals to combat bacterial infections and to regulate innate immune responses....

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.01418-16

    authors: Kao C,Lin X,Yi G,Zhang Y,Rowe-Magnus DA,Bush K

    更新日期:2016-09-20 00:00:00

  • Antivirulence activity of the human gut metabolome.

    abstract::The mammalian gut contains a complex assembly of commensal microbes termed microbiota. Although much has been learned about the role of these microbes in health, the mechanisms underlying these functions are ill defined. We have recently shown that the mammalian gut contains thousands of small molecules, most of which...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.01183-14

    authors: Antunes LC,McDonald JA,Schroeter K,Carlucci C,Ferreira RB,Wang M,Yurist-Doutsch S,Hira G,Jacobson K,Davies J,Allen-Vercoe E,Finlay BB

    更新日期:2014-07-29 00:00:00

  • (p)ppGpp and c-di-AMP Homeostasis Is Controlled by CbpB in Listeria monocytogenes.

    abstract::The facultative intracellular pathogen Listeria monocytogenes, like many related Firmicutes, uses the nucleotide second messenger cyclic di-AMP (c-di-AMP) to adapt to changes in nutrient availability, osmotic stress, and the presence of cell wall-acting antibiotics. In rich medium, c-di-AMP is essential; however, muta...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.01625-20

    authors: Peterson BN,Young MKM,Luo S,Wang J,Whiteley AT,Woodward JJ,Tong L,Wang JD,Portnoy DA

    更新日期:2020-08-25 00:00:00

  • Type III secretion of ExoU is critical during early Pseudomonas aeruginosa pneumonia.

    abstract:UNLABELLED:The Pseudomonas aeruginosa type III secretion system has been associated with poor outcomes in both animal models and human patients. Despite a large number of studies exploring the regulation of type III secretion in vitro, little is known about the timing of secretion during mammalian infection. Here we de...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.00032-13

    authors: Howell HA,Logan LK,Hauser AR

    更新日期:2013-03-12 00:00:00

  • Structure of the Receptor Binding Domain of EnvP(b)1, an Endogenous Retroviral Envelope Protein Expressed in Human Tissues.

    abstract::EnvP(b)1 is an endogenous retroviral envelope gene found in human and other primate genomes. We report EnvP(b)1 sequences in primate genomes consistent with an integration event between 40 and 71 million years ago. Using a highly specific polyclonal antiserum raised against the putative receptor binding domain (RBD) o...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.02772-20

    authors: McCarthy KR,Timpona JL,Jenni S,Bloyet LM,Brusic V,Johnson WE,Whelan SPJ,Robinson-McCarthy LR

    更新日期:2020-11-17 00:00:00

  • Adipose Tissue Regulates Pulmonary Pathology during TB Infection.

    abstract::Tuberculosis (TB), caused by Mycobacterium tuberculosis infection, remains a major cause of mortality and morbidity worldwide. One-third of the world population is infected with M. tuberculosis, and about 15 million people with latent tuberculosis infection (LTBI) reside in the United States. An estimated 10% of indiv...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.02771-18

    authors: Ayyappan JP,Ganapathi U,Lizardo K,Vinnard C,Subbian S,Perlin DS,Nagajyothi JF

    更新日期:2019-04-16 00:00:00

  • Cuts Both Ways: Proteases Modulate Virulence of Enterohemorrhagic Escherichia coli.

    abstract::Enterohemorrhagic Escherichia coli (EHEC) is a major cause of foodborne gastrointestinal illness. EHEC uses a specialized type III secretion system (T3SS) to form attaching and effacing lesions in the colonic epithelium and outcompete commensal gut microbiota to cause disease. A recent report in mBio (E. A. Cameron, M...

    journal_title:mBio

    pub_type: 评论,杂志文章

    doi:10.1128/mBio.00115-19

    authors: Palmer LD,Skaar EP

    更新日期:2019-02-26 00:00:00

  • The Antituberculosis Drug Ethambutol Selectively Blocks Apical Growth in CMN Group Bacteria.

    abstract::Members of the genus Mycobacterium are the most prevalent cause of infectious diseases. Mycobacteria have a complex cell envelope containing a peptidoglycan layer and an additional arabinogalactan polymer to which a mycolic acid bilayer is linked; this complex, multilayered cell wall composition (mAGP) is conserved am...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.02213-16

    authors: Schubert K,Sieger B,Meyer F,Giacomelli G,Böhm K,Rieblinger A,Lindenthal L,Sachs N,Wanner G,Bramkamp M

    更新日期:2017-02-07 00:00:00

  • Identification of a New Lipoprotein Export Signal in Gram-Negative Bacteria.

    abstract::Bacteria of the phylum Bacteroidetes, including commensal organisms and opportunistic pathogens, harbor abundant surface-exposed multiprotein membrane complexes (Sus-like systems) involved in carbohydrate acquisition. These complexes have been mostly linked to commensalism, and in some instances, they have also been s...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.01232-16

    authors: Lauber F,Cornelis GR,Renzi F

    更新日期:2016-10-25 00:00:00

  • EspC, an Autotransporter Protein Secreted by Enteropathogenic Escherichia coli, Causes Apoptosis and Necrosis through Caspase and Calpain Activation, Including Direct Procaspase-3 Cleavage.

    abstract:UNLABELLED:Enteropathogenic Escherichia coli (EPEC) has the ability to antagonize host apoptosis during infection through promotion and inhibition of effectors injected by the type III secretion system (T3SS), but the total number of these effectors and the overall functional relationships between these effectors durin...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.00479-16

    authors: Serapio-Palacios A,Navarro-Garcia F

    更新日期:2016-06-21 00:00:00

  • Modulation of Monocyte-Driven Myositis in Alphavirus Infection Reveals a Role for CX3CR1+ Macrophages in Tissue Repair.

    abstract::Arthritogenic alphaviruses such as Ross River and Chikungunya viruses cause debilitating muscle and joint pain and pose significant challenges in the light of recent outbreaks. How host immune responses are orchestrated after alphaviral infections and lead to musculoskeletal inflammation remains poorly understood. Her...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.03353-19

    authors: Zaid A,Tharmarajah K,Mostafavi H,Freitas JR,Sheng KC,Foo SS,Chen W,Vider J,Liu X,West NP,Herrero LJ,Taylor A,Mackay LK,Getts DR,King NJC,Mahalingam S

    更新日期:2020-03-03 00:00:00

  • Genome-wide Annotation, Identification, and Global Transcriptomic Analysis of Regulatory or Small RNA Gene Expression in Staphylococcus aureus.

    abstract:UNLABELLED:In Staphylococcus aureus, hundreds of small regulatory or small RNAs (sRNAs) have been identified, yet this class of molecule remains poorly understood and severely understudied. sRNA genes are typically absent from genome annotation files, and as a consequence, their existence is often overlooked, particula...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.01990-15

    authors: Carroll RK,Weiss A,Broach WH,Wiemels RE,Mogen AB,Rice KC,Shaw LN

    更新日期:2016-02-09 00:00:00

  • Multicenter outbreak of infections by Saprochaete clavata, an unrecognized opportunistic fungal pathogen.

    abstract:UNLABELLED:Rapidly fatal cases of invasive fungal infections due to a fungus later identified as Saprochaete clavata were reported in France in May 2012. The objectives of this study were to determine the clonal relatedness of the isolates and to investigate possible sources of contamination. A nationwide alert was lau...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.02309-14

    authors: Vaux S,Criscuolo A,Desnos-Ollivier M,Diancourt L,Tarnaud C,Vandenbogaert M,Brisse S,Coignard B,Dromer F,Geotrichum Investigation Group.

    更新日期:2014-12-16 00:00:00

  • Heteroresistance at the single-cell level: adapting to antibiotic stress through a population-based strategy and growth-controlled interphenotypic coordination.

    abstract:UNLABELLED:Heteroresistance refers to phenotypic heterogeneity of microbial clonal populations under antibiotic stress, and it has been thought to be an allocation of a subset of "resistant" cells for surviving in higher concentrations of antibiotic. The assumption fits the so-called bet-hedging strategy, where a bacte...

    journal_title:mBio

    pub_type: 杂志文章,多中心研究

    doi:10.1128/mBio.00942-13

    authors: Wang X,Kang Y,Luo C,Zhao T,Liu L,Jiang X,Fu R,An S,Chen J,Jiang N,Ren L,Wang Q,Baillie JK,Gao Z,Yu J

    更新日期:2014-02-11 00:00:00

  • Range Expansion and the Origin of USA300 North American Epidemic Methicillin-Resistant Staphylococcus aureus.

    abstract::The USA300 North American epidemic (USA300-NAE) clone of methicillin-resistant Staphylococcus aureus has caused a wave of severe skin and soft tissue infections in the United States since it emerged in the early 2000s, but its geographic origin is obscure. Here we use the population genomic signatures expected from th...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.02016-17

    authors: Challagundla L,Luo X,Tickler IA,Didelot X,Coleman DC,Shore AC,Coombs GW,Sordelli DO,Brown EL,Skov R,Larsen AR,Reyes J,Robledo IE,Vazquez GJ,Rivera R,Fey PD,Stevenson K,Wang SH,Kreiswirth BN,Mediavilla JR,Arias CA

    更新日期:2018-01-02 00:00:00

  • Inhibition of the ATP Synthase Eliminates the Intrinsic Resistance of Staphylococcus aureus towards Polymyxins.

    abstract::Staphylococcus aureus is intrinsically resistant to polymyxins (polymyxin B and colistin), an important class of cationic antimicrobial peptides used in treatment of Gram-negative bacterial infections. To understand the mechanisms underlying intrinsic polymyxin resistance in S. aureus, we screened the Nebraska Transpo...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.01114-17

    authors: Vestergaard M,Nøhr-Meldgaard K,Bojer MS,Krogsgård Nielsen C,Meyer RL,Slavetinsky C,Peschel A,Ingmer H

    更新日期:2017-09-05 00:00:00

  • Role of CTR4 in the Virulence of Cryptococcus neoformans.

    abstract:UNLABELLED:While research has identified an important contribution for metals, such as iron, in microbial pathogenesis, the roles of other transition metals, such as copper, remain mostly unknown. Recent evidence points to a requirement for copper homeostasis in the virulence of Cryptococcus neoformans based on a role ...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.00285-12

    authors: Waterman SR,Park YD,Raja M,Qiu J,Hammoud DA,O'Halloran TV,Williamson PR

    更新日期:2012-10-02 00:00:00

  • Novel transporter required for biogenesis of cbb3-type cytochrome c oxidase in Rhodobacter capsulatus.

    abstract:UNLABELLED:The acquisition, delivery, and incorporation of metals into their respective metalloproteins are important cellular processes. These processes are tightly controlled in order to prevent exposure of cells to free-metal concentrations that could yield oxidative damage. Copper (Cu) is one such metal that is req...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.00293-11

    authors: Ekici S,Yang H,Koch HG,Daldal F

    更新日期:2012-01-31 00:00:00

  • Long-lasting T cell-independent IgG responses require MyD88-mediated pathways and are maintained by high levels of virus persistence.

    abstract:UNLABELLED:Many viruses induce acute T cell-independent (TI) B cell responses due to their repetitive epitopes and the induction of innate cytokines. Nevertheless, T cell help is thought necessary for the development of long-lasting antiviral antibody responses in the form of long-lived plasma cells and memory B cells....

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.00812-13

    authors: Raval FM,Mishra R,Garcea RL,Welsh RM,Szomolanyi-Tsuda E

    更新日期:2013-11-05 00:00:00

  • Emerging Fungal Pathogen Candida auris Evades Neutrophil Attack.

    abstract::Candida auris has recently emerged as the first fungal pathogen to cause a global public health threat. The reason this species is causing hospital-associated outbreaks of invasive candidiasis with high mortality is unknown. In this study, we examine the interaction of C. auris with neutrophils, leukocytes critical fo...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.01403-18

    authors: Johnson CJ,Davis JM,Huttenlocher A,Kernien JF,Nett JE

    更新日期:2018-08-21 00:00:00

  • Leucine Biosynthesis Is Involved in Regulating High Lipid Accumulation in Yarrowia lipolytica.

    abstract::The yeast Yarrowia lipolytica is a potent accumulator of lipids, and lipogenesis in this organism can be influenced by a variety of factors, such as genetics and environmental conditions. Using a multifactorial study, we elucidated the effects of both genetic and environmental factors on regulation of lipogenesis in Y...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.00857-17

    authors: Kerkhoven EJ,Kim YM,Wei S,Nicora CD,Fillmore TL,Purvine SO,Webb-Robertson BJ,Smith RD,Baker SE,Metz TO,Nielsen J

    更新日期:2017-06-20 00:00:00

  • FOSL1 Inhibits Type I Interferon Responses to Malaria and Viral Infections by Blocking TBK1 and TRAF3/TRIF Interactions.

    abstract::Innate immune response plays a critical role in controlling invading pathogens, but such an immune response must be tightly regulated. Insufficient or overactivated immune responses may lead to harmful or even fatal consequences. To dissect the complex host-parasite interactions and the molecular mechanisms underlying...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.02161-16

    authors: Cai B,Wu J,Yu X,Su XZ,Wang RF

    更新日期:2017-01-03 00:00:00

  • Structure-Based Modification of an Anti-neuraminidase Human Antibody Restores Protection Efficacy against the Drifted Influenza Virus.

    abstract::Here, we investigate a monoclonal antibody, Z2B3, isolated from an H7N9-infected patient, that exhibited cross-reactivity to both N9 (group 2) and a broad range of seasonal and avian N1 (group 1) proteins but lost activity to the N1 with the substitution K432E. This substitution exists in 99.25% of seasonal influenza ...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.02315-20

    authors: Jiang H,Peng W,Qi J,Chai Y,Song H,Bi Y,Rijal P,Wang H,Oladejo BO,Liu J,Shi Y,Gao GF,Townsend AR,Wu Y

    更新日期:2020-10-06 00:00:00

  • Large chromosomal rearrangements during a long-term evolution experiment with Escherichia coli.

    abstract:UNLABELLED:Large-scale rearrangements may be important in evolution because they can alter chromosome organization and gene expression in ways not possible through point mutations. In a long-term evolution experiment, twelve Escherichia coli populations have been propagated in a glucose-limited environment for over 25 ...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.01377-14

    authors: Raeside C,Gaffé J,Deatherage DE,Tenaillon O,Briska AM,Ptashkin RN,Cruveiller S,Médigue C,Lenski RE,Barrick JE,Schneider D

    更新日期:2014-09-09 00:00:00

  • Nitrite Derived from Endogenous Bacterial Nitric Oxide Synthase Activity Promotes Aerobic Respiration.

    abstract::Macrophage-derived nitric oxide (NO·) is a crucial effector against invading pathogens. Yet, paradoxically, several bacterial species, including some pathogens, are known to endogenously produce NO· via nitric oxide synthase (NOS) activity, despite its apparent cytotoxicity. Here, we reveal a conserved role for bacter...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.00887-17

    authors: Chaudhari SS,Kim M,Lei S,Razvi F,Alqarzaee AA,Hutfless EH,Powers R,Zimmerman MC,Fey PD,Thomas VC

    更新日期:2017-08-01 00:00:00

  • A mouse model for human norovirus.

    abstract:UNLABELLED:Human noroviruses (HuNoVs) cause significant morbidity and mortality worldwide. However, despite substantial efforts, a small-animal model for HuNoV has not been described to date. Since "humanized" mice have been successfully used to study human-tropic pathogens in the past, we challenged BALB/c mice defici...

    journal_title:mBio

    pub_type: 杂志文章

    doi:10.1128/mBio.00450-13

    authors: Taube S,Kolawole AO,Höhne M,Wilkinson JE,Handley SA,Perry JW,Thackray LB,Akkina R,Wobus CE

    更新日期:2013-07-16 00:00:00