Kinetic asymmetry allows macromolecular catalysts to drive an information ratchet.

Abstract:

:Molecular machines carry out their function by equilibrium mechanical motions in environments that are far from thermodynamic equilibrium. The mechanically equilibrated character of the trajectories of the macromolecule has allowed development of a powerful theoretical description, reminiscent of Onsager's trajectory thermodynamics, that is based on the principle of microscopic reversibility. Unlike the situation at thermodynamic equilibrium, kinetic parameters play a dominant role in determining steady-state concentrations away from thermodynamic equilibrium, and kinetic asymmetry provides a mechanism by which chemical free-energy released by catalysis can drive directed motion, molecular adaptation, and self-assembly. Several examples drawn from the recent literature, including a catenane-based chemically driven molecular rotor and a synthetic molecular assembler or pump, are discussed.

journal_name

Nat Commun

journal_title

Nature communications

authors

Astumian RD

doi

10.1038/s41467-019-11402-7

subject

Has Abstract

pub_date

2019-08-23 00:00:00

pages

3837

issue

1

issn

2041-1723

pii

10.1038/s41467-019-11402-7

journal_volume

10

pub_type

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