Genome Organization of Canada Goose Coronavirus, A Novel Species Identified in a Mass Die-off of Canada Geese.

Abstract:

:The complete genome of a novel coronavirus was sequenced directly from the cloacal swab of a Canada goose that perished in a die-off of Canada and Snow geese in Cambridge Bay, Nunavut, Canada. Comparative genomics and phylogenetic analysis indicate it is a new species of Gammacoronavirus, as it falls below the threshold of 90% amino acid similarity in the protein domains used to demarcate Coronaviridae. Additional features that distinguish the genome of Canada goose coronavirus include 6 novel ORFs, a partial duplication of the 4 gene and a presumptive change in the proteolytic processing of polyproteins 1a and 1ab.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Papineau A,Berhane Y,Wylie TN,Wylie KM,Sharpe S,Lung O

doi

10.1038/s41598-019-42355-y

subject

Has Abstract

pub_date

2019-04-11 00:00:00

pages

5954

issue

1

issn

2045-2322

pii

10.1038/s41598-019-42355-y

journal_volume

9

pub_type

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