Responses to soil pH gradients of inorganic phosphate solubilizing bacteria community.

Abstract:

:Soil pH is commonly considered a dominant factor affecting the function of microbiota. Few studies, however, have focused on communities of bacteria able to solubilize inorganic phosphate (iPSB), which are important for the mobilization of soil phosphorus (P), because finding an effective method to assess the abundance and diversity of iPSB communities is difficult. We used a newly reported method of database alignment and quantified the gene pqqC to analyze the compositions of iPSB communities from five soils with pH gradients ranging from 4 to 8. The iPSB community structure differed significantly between these soil types. Among iPSB community, Bacillus was the dominant genus, followed by Arthrobacter and Streptomyces. A redundancy analysis indicated that soil pH was the most important of 15 soil factors and their pairwise interactions, accounting for 5.12% of the variance. The abundance of the iPSB communities increased with pH within the gradients which was confirmed by experimental adjustment of pH, suggesting that the defect P status in high pH soil was speculated as the driving force of iPSB community population. Our study demonstrated the dominant role of soil pH on the iPSB community, which may contribute to the understanding the possible mechanism of microbial P mobilization for better improvement of P use-efficiency.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Zheng BX,Zhang DP,Wang Y,Hao XL,Wadaan MAM,Hozzein WN,Peñuelas J,Zhu YG,Yang XR

doi

10.1038/s41598-018-37003-w

subject

Has Abstract

pub_date

2019-01-10 00:00:00

pages

25

issue

1

issn

2045-2322

pii

10.1038/s41598-018-37003-w

journal_volume

9

pub_type

杂志文章
  • Postprandial metabolic response of breast-fed infants and infants fed lactose-free vs regular infant formula: A randomized controlled trial.

    abstract::Lactose intolerance is a major concern driving the growth of lactose-free foods including lactose-free infant formula. It is unknown what the metabolic consequence is of consumption of a formula where lactose has been replaced with corn syrup solids (CSS). Here, a randomized double-blinded intervention study was condu...

    journal_title:Scientific reports

    pub_type: 杂志文章,随机对照试验

    doi:10.1038/s41598-017-03975-4

    authors: Slupsky CM,He X,Hernell O,Andersson Y,Rudolph C,Lönnerdal B,West CE

    更新日期:2017-06-16 00:00:00

  • Sustainable Syntheses of (-)-Jerantinines A & E and Structural Characterisation of the Jerantinine-Tubulin Complex at the Colchicine Binding Site.

    abstract::The jerantinine family of Aspidosperma indole alkaloids from Tabernaemontana corymbosa are potent microtubule-targeting agents with broad spectrum anticancer activity. The natural supply of these precious metabolites has been significantly disrupted due to the inclusion of T. corymbosa on the endangered list of threat...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-28880-2

    authors: Smedley CJ,Stanley PA,Qazzaz ME,Prota AE,Olieric N,Collins H,Eastman H,Barrow AS,Lim KH,Kam TS,Smith BJ,Duivenvoorden HM,Parker BS,Bradshaw TD,Steinmetz MO,Moses JE

    更新日期:2018-07-13 00:00:00

  • Transcriptomic profiles of Clostridium ljungdahlii during lithotrophic growth with syngas or H2 and CO2 compared to organotrophic growth with fructose.

    abstract::Clostridium ljungdahlii derives energy by lithotrophic and organotrophic acetogenesis. C. ljungdahlii was grown organotrophically with fructose and also lithotrophically, either with syngas - a gas mixture containing hydrogen (H2), carbon dioxide (CO2), and carbon monoxide (CO), or with H2 and CO2. Gene expression was...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-12712-w

    authors: Aklujkar M,Leang C,Shrestha PM,Shrestha M,Lovley DR

    更新日期:2017-10-13 00:00:00

  • Full-length cloning, sequence analysis and expression detection of the β-tubulin gene from the Chinese gall aphid (Schlechtendalia chinensis).

    abstract::Some insect galls are formed on sumac plants by certain aphid species and have been used for medicinal and chemical purposes as they are rich in tannins. The most prominent species among gall aphids in China is Schlechtendalia chinensis, which formed horn-shaped galls on the winged rachis of Rhus chinensis. S. chinens...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-06806-8

    authors: Liu P,Yang ZX,Chen XM,Chen H

    更新日期:2017-07-25 00:00:00

  • Artificial biofilms establish the role of matrix interactions in staphylococcal biofilm assembly and disassembly.

    abstract::We demonstrate that the microstructural and mechanical properties of bacterial biofilms can be created through colloidal self-assembly of cells and polymers, and thereby link the complex material properties of biofilms to well understood colloidal and polymeric behaviors. This finding is applied to soften and disassem...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep13081

    authors: Stewart EJ,Ganesan M,Younger JG,Solomon MJ

    更新日期:2015-08-14 00:00:00

  • Developmental toxicity of diclofenac and elucidation of gene regulation in zebrafish (Danio rerio).

    abstract::Environmental pollution by emerging contaminants, e.g. pharmaceuticals, has become a matter of widespread concern in recent years. We investigated the membrane transport of diclofenac and its toxic effects on gene expression and the development of zebrafish embryos. The association of diclofenac with the embryos confo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep04841

    authors: Chen JB,Gao HW,Zhang YL,Zhang Y,Zhou XF,Li CQ,Gao HP

    更新日期:2014-05-02 00:00:00

  • Spatial Distribution of the Cannabinoid Type 1 and Capsaicin Receptors May Contribute to the Complexity of Their Crosstalk.

    abstract::The cannabinoid type 1 (CB1) receptor and the capsaicin receptor (TRPV1) exhibit co-expression and complex, but largely unknown, functional interactions in a sub-population of primary sensory neurons (PSN). We report that PSN co-expressing CB1 receptor and TRPV1 form two distinct sub-populations based on their pharmac...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep33307

    authors: Chen J,Varga A,Selvarajah S,Jenes A,Dienes B,Sousa-Valente J,Kulik A,Veress G,Brain SD,Baker D,Urban L,Mackie K,Nagy I

    更新日期:2016-09-22 00:00:00

  • The Height-Width-Depth Ratios of the Intervertebral Discs and Vertebral Bodies in Adolescent Idiopathic Scoliosis vs Controls in a Chinese Population.

    abstract::Adolescent idiopathic scoliosis (AIS) patients have been reported to be taller and more slender than normal controls, suggesting less mechanical stiffness of their trunk and spine. For assessment of mechanical stiffness, to our best knowledge this is the first to study height-width-depth relations at the level of the ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep46448

    authors: Chen H,Schlösser TPC,Brink RC,Colo D,van Stralen M,Shi L,Chu WCW,Heng PA,Castelein RM,Cheng JCY

    更新日期:2017-04-18 00:00:00

  • Homeobox code model of heterodont tooth in mammals revised.

    abstract::Heterodonty is one of the hallmarks of mammals. It has been suggested that, homeobox genes, differentially expressed in the ectomesenchyme of the jaw primordium along the distal-proximal axis, would determine the tooth classes (homeobox code model) based on mouse studies. Because mouse has highly specialized tooth pat...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-49116-x

    authors: Wakamatsu Y,Egawa S,Terashita Y,Kawasaki H,Tamura K,Suzuki K

    更新日期:2019-09-06 00:00:00

  • The patterns of response of 11 regimens for infantile spasms.

    abstract::Infantile spasms (ISs) is a devastating form of an early infantile epileptic encephalopathy. The patterns of response of multiple regimens, and the difference in response rates for the cases who receive first-line therapies on time versus those who receive them after non-first-line therapies are unknown. We performed ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-68403-6

    authors: Mao L,Kessi M,Peng P,He F,Zhang C,Yang L,Wu L,Yin F,Peng J

    更新日期:2020-07-13 00:00:00

  • Comparisons of conventional and novel anthropometric obesity indices to predict metabolic syndrome among vegetarians in Malaysia.

    abstract::Our study aimed to compare the ability of anthropometric obesity indices to predict MetS and to determine the sex-specific optimal cut-off values for MetS among Malaysian vegetarians. Body weight, height, waist circumference (WC), blood pressure (BP), fasting venous blood sample were collected from 273 vegetarians in ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-78035-5

    authors: Ching YK,Chin YS,Appukutty M,Gan WY,Chan YM

    更新日期:2020-11-30 00:00:00

  • High genetic burden of type 2 diabetes can promote the high prevalence of disease: a longitudinal cohort study in Iran.

    abstract::Type 2 diabetes (T2D) is emerging as one of the serious public health issues in both developed and developing counties. Here, we surveyed the worldwide population differentiation in T2D-associated variants and assessed the genetic burden of the disease in an ongoing Tehran Cardio-Metabolic Genetic Study (TCGS) cohort ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-70725-4

    authors: Moazzam-Jazi M,Najd Hassan Bonab L,Zahedi AS,Daneshpour MS

    更新日期:2020-08-19 00:00:00

  • The first crop plant genetically engineered to release an insect pheromone for defence.

    abstract::Insect pheromones offer potential for managing pests of crop plants. Volatility and instability are problems for deployment in agriculture but could be solved by expressing genes for the biosynthesis of pheromones in the crop plants. This has now been achieved by genetically engineering a hexaploid variety of wheat to...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep11183

    authors: Bruce TJA,Aradottir GI,Smart LE,Martin JL,Caulfield JC,Doherty A,Sparks CA,Woodcock CM,Birkett MA,Napier JA,Jones HD,Pickett JA

    更新日期:2015-06-25 00:00:00

  • Identification and quantification of plasma calciprotein particles with distinct physical properties in patients with chronic kidney disease.

    abstract::Calciprotein particles (CPP) are solid-phase calcium-phosphate bound to serum protein fetuin-A and dispersed as colloids in the blood. Recent clinical studies indicated that serum CPP levels were increased with decline of renal function and associated with inflammation and vascular calcification. However, CPP assays u...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-19677-4

    authors: Miura Y,Iwazu Y,Shiizaki K,Akimoto T,Kotani K,Kurabayashi M,Kurosu H,Kuro-O M

    更新日期:2018-01-19 00:00:00

  • Insights on the evolution of the living Great Amazon Reef System, equatorial West Atlantic.

    abstract::The Great Amazon Reef (GARS) is an extensive mesophotic reef ecosystem between Brazil and the Caribbean. Despite being considered as one of the most important mesophotic reef ecosystems of the South Atlantic, recent criticism on the existence of a living reef in the Amazon River mouth was raised by some scientists and...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-50245-6

    authors: de Mahiques MM,Siegle E,Francini-Filho RB,Thompson FL,de Rezende CE,Gomes JD,Asp NE

    更新日期:2019-09-23 00:00:00

  • Loss of maternal annexin A5 increases the likelihood of placental platelet thrombosis and foetal loss.

    abstract::Antiphospholipid syndrome is associated with an increased risk of thrombosis and pregnancy loss. Annexin A5 (Anxa5) is a candidate autoantigen. It is not known, however, whether endogenous Anxa5 prevents foetal loss during normal pregnancy. We found significant reductions in litter size and foetal weight in Anxa5-null...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep00827

    authors: Ueki H,Mizushina T,Laoharatchatathanin T,Terashima R,Nishimura Y,Rieanrakwong D,Yonezawa T,Kurusu S,Hasegawa Y,Brachvogel B,Pöschl E,Kawaminami M

    更新日期:2012-01-01 00:00:00

  • Predicting Radiation Resistance in Breast Cancer with Expression Status of Phosphorylated S6K1.

    abstract::Emerging evidence suggests that the mammalian target of rapamcyin (mTOR) pathway is associated with radio-resistance in cancer treatment. We hypothesised that phosphorylated ribosomal S6 kinase 1 (p-S6K1), a major downstream regulator of the mTOR pathway, may play a role in predicting radio-resistance. Therefore, we e...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-57496-8

    authors: Choi J,Yoon YN,Kim N,Park CS,Seol H,Park IC,Kim HA,Noh WC,Kim JS,Seong MK

    更新日期:2020-01-20 00:00:00

  • Effect of temperature on accidental human mortality: A time-series analysis in Shenzhen, Guangdong Province in China.

    abstract::Health-risk assessments of temperature are central to determine total non-accidental human mortality; however, few studies have investigated the effect of temperature on accidental human mortality. We performed a time-series study combined with a distributed lag non-linear model (DLNM) to quantify the non-linear and d...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-65344-y

    authors: Lian T,Fu Y,Sun M,Yin M,Zhang Y,Huang L,Huang J,Xu Z,Mao C,Ni J,Liu G

    更新日期:2020-05-21 00:00:00

  • Selective cognitive dysfunction and physical disability improvement after autologous hematopoietic stem cell transplantation in highly active multiple sclerosis.

    abstract::The aim was to assess the cognitive dysfunction and physical disability after autologous hematopoietic stem cell transplantation (AHSCT), to explore the potential factors influencing disability regression after AHSCT and to estimate the safety of low-dose immunosuppressive therapy in highly active Multiple Sclerosis (...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-78160-1

    authors: Giedraitiene N,Kizlaitiene R,Peceliunas V,Griskevicius L,Kaubrys G

    更新日期:2020-12-04 00:00:00

  • Hyperuricemia and overexcretion of uric acid increase the risk of simple renal cysts in type 2 diabetes.

    abstract::Previous studies have discussed the relationship between simple renal cysts (SRC) and serum uric acid level in healthy individuals. We performed a cross-sectional study to evaluate the association between serum uric acid level and fractional excretion of uric acid (FEUA) and simple renal cysts in males and postmenopau...

    journal_title:Scientific reports

    pub_type: 临床试验,杂志文章

    doi:10.1038/s41598-017-04036-6

    authors: Han Y,Zhang M,Lu J,Zhang L,Han J,Zhao F,Chen H,Bao Y,Jia W

    更新日期:2017-06-19 00:00:00

  • Effects of symmetry-breaking on electromagnetic backscattering.

    abstract::Systems with a discrete rotational symmetry [Formula: see text] where [Formula: see text] that also have electromagnetic duality symmetry exhibit zero backscattering. The impact of breaking one of the two symmetries on the emerging backscattering has not yet been systematically studied. Here, we investigate the effect...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80347-5

    authors: Abdelrahman MI,Slivina E,Rockstuhl C,Fernandez-Corbaton I

    更新日期:2021-01-18 00:00:00

  • Quantum state transfer via Bloch oscillations.

    abstract::The realization of reliable quantum channels, able to transfer a quantum state with high fidelity, is a fundamental step in the construction of scalable quantum devices. In this paper we describe a transmission scheme based on the genuinely quantum effect known as Bloch oscillations. The proposed protocol makes it pos...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep26054

    authors: Tamascelli D,Olivares S,Rossotti S,Osellame R,Paris MG

    更新日期:2016-05-18 00:00:00

  • Soil erodibility indices under different land uses in Ri-Bhoi district of Meghalaya (India).

    abstract::In absence of soil erosion plots for determination of erodibility index (K) for erosion models like Universal Soil Loss Equation (USLE) or Revised Universal Soil Loss Equation (RUSLE) to estimate soil erosion, empirical relations are used. In the present study, soil erodibility index was determined for entire Ri-bhoi ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-72070-y

    authors: Olaniya M,Bora PK,Das S,Chanu PH

    更新日期:2020-09-11 00:00:00

  • Detection of oriented fractal scaling components in anisotropic two-dimensional trajectories.

    abstract::We propose a novel class of mixed fluctuations with different orientations and fractal scaling features as a model for anisotropic two-dimensional (2D) trajectories hypothesized to appear in complex systems. Furthermore, we develop the oriented fractal scaling component analysis (OFSCA) to decompose such mixed fluctua...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-78807-z

    authors: Seleznov I,Popov A,Kikuchi K,Kolosova E,Kolomiiets B,Nakata A,Kaneko M,Kiyono K

    更新日期:2020-12-14 00:00:00

  • Co-remediation of Pb Contaminated Soils by Heat Modified Sawdust and Festuca arundinacea.

    abstract::This research aimed to explore the potential and mechanism of heat modified sawdust combined with Festuca arundinacea for the remediation of Pb-contaminated soil. We determined Pb concentration and biochemical indices in plants and soils, analyzed microbial communities in soil, and studied Pb distribution in subcellul...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-61668-x

    authors: Zhang Y,Wang X,Ji H

    更新日期:2020-03-13 00:00:00

  • Organic-Silica Interactions in Saline: Elucidating the Structural Influence of Calcium in Low-Salinity Enhanced Oil Recovery.

    abstract::Enhanced oil recovery using low-salinity solutions to sweep sandstone reservoirs is a widely-practiced strategy. The mechanisms governing this remain unresolved. Here, we elucidate the role of Ca2+ by combining chemical force microscopy (CFM) and molecular dynamics (MD) simulations. We probe the influence of electroly...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-10327-9

    authors: Desmond JL,Juhl K,Hassenkam T,Stipp SLS,Walsh TR,Rodger PM

    更新日期:2017-09-08 00:00:00

  • Subcellular localisation modulates ubiquitylation and degradation of Ascl1.

    abstract::The proneural transcription factor Ascl1 is a master regulator of neurogenesis, coordinating proliferation and differentiation in the central nervous system. While its expression is well characterised, post-translational regulation is much less well understood. Here we demonstrate that a population of chromatin-bound ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-23056-4

    authors: Gillotin S,Davies JD,Philpott A

    更新日期:2018-03-15 00:00:00

  • Determination of the pathogenicity of known COL4A5 intronic variants by in vitro splicing assay.

    abstract::X-linked Alport syndrome (XLAS) is a congenital renal disease caused by mutations in COL4A5. In XLAS cases suspected of being caused by aberrant splicing, transcript analysis needs to be conducted to determine splicing patterns and assess the pathogenicity. However, such analysis is not always available. We conducted ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-48990-9

    authors: Horinouchi T,Nozu K,Yamamura T,Minamikawa S,Nagano C,Sakakibara N,Nakanishi K,Shima Y,Morisada N,Ishiko S,Aoto Y,Nagase H,Takeda H,Rossanti R,Kaito H,Matsuo M,Iijima K

    更新日期:2019-09-03 00:00:00

  • The only complete articulated early Miocene chameleon skull (Rusinga Island, Kenya) suggests an African origin for Madagascar's endemic chameleons.

    abstract::We here present the first detailed study of the specimen KNM-RU 18340 from Rusinga Island (Kenya), the only known complete early Miocene chameleon skull, using micro-CT. This specimen represents one of the oldest chameleon fossils ever recovered. For the first time, the skull bone internal surfaces, their sutures, and...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-57014-5

    authors: Čerňanský A,Herrel A,Kibii JM,Anderson CV,Boistel R,Lehmann T

    更新日期:2020-01-10 00:00:00

  • Heuristics guide the implementation of social preferences in one-shot Prisoner's Dilemma experiments.

    abstract::Cooperation in one-shot anonymous interactions is a widely documented aspect of human behaviour. Here we shed light on the motivations behind this behaviour by experimentally exploring cooperation in a one-shot continuous-strategy Prisoner's Dilemma (i.e. one-shot two-player Public Goods Game). We examine the distribu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep06790

    authors: Capraro V,Jordan JJ,Rand DG

    更新日期:2014-10-28 00:00:00