Revealing the Critical Regulators of Cell Identity in the Mouse Cell Atlas.

Abstract:

:Recent progress in single-cell technologies has enabled the identification of all major cell types in mouse. However, for most cell types, the regulatory mechanism underlying their identity remains poorly understood. By computational analysis of the recently published mouse cell atlas data, we have identified 202 regulons whose activities are highly variable across different cell types, and more importantly, predicted a small set of essential regulators for each major cell type in mouse. Systematic validation by automated literature and data mining provides strong additional support for our predictions. Thus, these predictions serve as a valuable resource that would be useful for the broad biological community. Finally, we have built a user-friendly, interactive web portal to enable users to navigate this mouse cell network atlas.

journal_name

Cell Rep

journal_title

Cell reports

authors

Suo S,Zhu Q,Saadatpour A,Fei L,Guo G,Yuan GC

doi

10.1016/j.celrep.2018.10.045

subject

Has Abstract

pub_date

2018-11-06 00:00:00

pages

1436-1445.e3

issue

6

issn

2211-1247

pii

S2211-1247(18)31634-6

journal_volume

25

pub_type

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