Abstract：
:Virulence factors of H. pylori, such as outer inflammatory protein A (oipA), are closely involved in the development of gastric diseases such as chronic gastritis and gastric cancer. The functional status of oipA is regulated by a repair mechanism based on CT dinucleotide repeats that influence the reading frame, thus granting the gene a functional or nonfunctional status; in other words, the functional status of the oipA gene seems to be associated with the development of gastric diseases. This study sought to detect the presence of the oipA gene and to determine its functional status in patients with gastric diseases. We analyzed 516 biopsy samples (101 with normal gastric tissue, 365 with chronic gastritis, and 50 with gastric cancer). The presence of oipA was determined by PCR, and the gene status was determined using sequencing reactions. The oipA gene was found to be associated with the development of chronic gastritis, and the "on" status of the gene was the most frequent in patients with gastric cancer who were from Western countries. The CT repeats revealed geographic characteristics, but it is the functional status of the oipA gene that seems to be involved in the development of gastric diseases and in the development of gastric cancer in particular.
journal_name
Arch Microbioljournal_title
Archives of microbiologyauthors
Sallas ML,Dos Santos MP,Orcini WA,David ÉB,Peruquetti RL,Payão SLM,Rasmussen LTdoi
10.1007/s00203-018-1580-5subject
Has Abstractpub_date
2019-01-01 00:00:00pages
93-97issue
1eissn
0302-8933issn
1432-072Xpii
10.1007/s00203-018-1580-5journal_volume
201pub_type
杂志文章abstract：:A Gram-staining-negative, non-spore-forming, non-flagellated, rod-shaped, catalase- and oxidase-negative bacterium, designated as Gsoil 193(T), was isolated from the soil of ginseng field in Pocheon province, South Korea. 16S rRNA gene sequence analysis showed that strain Gsoil 193(T) belonged to family Xanthomonadace...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-016-1214-8
更新日期：2016-08-01 00:00:00
abstract：:The anticandidal potential of Geraniol (Ger) against Candida albicans has already been established. The present study reveals deeper insights into the mechanisms of action of Ger. We observed that the repertoire of antifungal activity was not only limited to C. albicans and its clinical isolates but also against non-a...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-016-1205-9
更新日期：2016-07-01 00:00:00
abstract：:The thermophilic bacterium Thermoanaerobacter tengcongensis has two single-stranded DNA-binding (SSB) proteins, designated TteSSB2 and TteSSB3. In a SSB complementation assay in Escherichia coli, only TteSSB3 took over the in vivo function of EcoSSB. We have cloned the ssb genes obtained by PCR and have developed E. c...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-008-0366-6
更新日期：2008-07-01 00:00:00
abstract：:A Gram-stain-negative, aerobic, non-motile, rod-shaped and non-spore-forming bacterium, designated YXT, was isolated from wetland soil. Compared to strain YXT, Pedobacter yonginense HMD1002T had the highest 16S rRNA gene sequence identity (97.8%), and the remaining strains had the identities below 97%. Phylogenetic an...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-018-1605-0
更新日期：2019-04-01 00:00:00
abstract：:Bacillus thuringiensis (Bt) is efficient, strongly specific, and avirulent to humans, making it one of the most popular biopesticides in the world. Bt LLP29 is a mosquitocidal strain that was first isolated from Magnolia denudata. To understand its molecular mechanism against mosquitoes, the genome of Bt LLP29 was seq...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-020-01875-2
更新日期：2020-09-01 00:00:00
abstract：:Citrobacter rodentium (Cr) is a mouse pathogen that mimics many aspects of enteropathogenic Escherichia coli infections including producing attaching and effacing (A/E) lesions. Host-adapted (HA) Cr cells that are shed at the peak of infection have been reported to be hyper-infective. The exact mechanism underlying th...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-016-1191-y
更新日期：2016-05-01 00:00:00
abstract：:1. With fumarate as the terminal electron acceptor and either H2 or formate as donor, Vibrio succinogenes could grow anaerobically in a mineral medium using fumarate as the sole carbon source. Both the growth rate and the cell yield were increased when glutamate was also present in the medium. 2. Glutamate was incorpo...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/BF00405882
更新日期：1982-05-01 00:00:00
abstract：:Glucose-limited continuous cultures were used to analyze sigmaB activity at decreasing growth rates. Expression of the sigmaB-dependent genes gsiB and ctc started to increase at a growth rate of 0.2 h-1, and both genes were induced approximately fivefold at a growth rate of 0.1 h-1 as compared to expression at the max...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s002030050731
更新日期：1999-05-01 00:00:00
abstract：:Aspergillus nidulans is able to grow on oleic acid as sole carbon source. Characterization of the oleate-induced beta-oxidation pathway showed the presence of the two enzyme activities involved in the first step of this catabolic system: acyl-CoA oxidase and acyl-CoA dehydrogenase. After isopicnic centrifugation in a ...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s002030050392
更新日期：1996-11-01 00:00:00
abstract：:The tricarboxylic acid (TCA) cycle is one of the major routes of carbon catabolism in Bacillus subtilis. The syntheses of the enzymes performing the initial reactions of the cycle, citrate synthase, and aconitase, are synergistically repressed by rapidly metabolizable carbon sources and glutamine. This regulation invo...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-005-0078-0
更新日期：2006-03-01 00:00:00
abstract：:The sulfate-reducing highly enriched culture N47 is capable to anaerobically degrade naphthalene, 2-methylnaphthalene, and 2-naphthoic acid. A proteogenomic investigation was performed to elucidate the initial activation reaction of anaerobic naphthalene degradation. This lead to the identification of an alpha-subunit...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-010-0667-4
更新日期：2011-04-01 00:00:00
abstract：:In beta-lactam-antibiotic-producing fungi, such as Aspergillus (Emericella) nidulans, L-alpha-aminoadipic acid is the branching point of the lysine and penicillin biosynthesis pathways. To obtain a deeper insight into the regulation of lysine biosynthesis genes, the regulation of the A. nidulans lysF gene, which encod...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s002030000246
更新日期：2001-02-01 00:00:00
abstract：:Polysomes were isolated both from growing gametophytes of Allomyces arbuscula and from gametangia prepared from mycelia at different periods during gametogenesis. Analysis of polysomes by sucrose gradients showed that ribosomes present in the gametangia monosome pool were shifted into polysomes. This shift was found t...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/BF00413089
更新日期：1977-04-01 00:00:00
abstract：:Under starvation conditions, rhodopsin-containing halobacteria show a light-accelerated death under aerobic conditions. This is attributed to photooxidative processes. Under anaerobic conditions, halobacteria die rapidly in the dark, and light prevents death. Since it has been shown by others that lightdriven ATP synt...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/BF00425136
更新日期：1976-08-01 00:00:00
abstract：:YfkE, a protein from Bacillus subtilis, exhibits homology to the Ca(2+):Cation Antiporter (CaCA) Family. In a fluorescence-based assay of everted membrane vesicles prepared from Na(+)(Ca(2+))/H(+) antiporter-defective mutant Escherichia coli KNabc, YfkE exhibited robust Ca(2+)/H(+) antiport activity, with a K (m) for ...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-009-0494-7
更新日期：2009-08-01 00:00:00
abstract：:The role of HoxX in hydrogenase biosynthesis of Alcaligenes eutrophus H16 was re-examined. The previously characterized hoxX deletion mutant HF344 and a newly constructed second hoxX mutant carrying a smaller in-frame deletion were studied. The second mutant was impaired in the activity of both the soluble and the mem...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s002030050667
更新日期：1998-11-01 00:00:00
abstract：:The methanotrophic bacterium Methylomicrobium album BG8 uses methane as a sole source of carbon and energy. This bacterium forms an extensive intracytoplasmic membrane. The first enzymes of the methane oxidation pathway are the membrane-bound particulate methane monooxygenase and the periplasmic methanol dehydrogenase...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-002-0426-2
更新日期：2002-07-01 00:00:00
abstract：:Two styrene monooxygenase types, StyA/StyB and StyA1/StyA2B, have been described each consisting of an epoxidase and a reductase. A gene fusion which led to the chimeric reductase StyA2B and the occurrence in different phyla are major differences. Identification of SMOA/SMOB-ADP1 of Acinetobacter baylyi ADP1 may enlig...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-014-1022-y
更新日期：2014-12-01 00:00:00
abstract：:Lactic acid bacteria can be considered as natural biopreservative and good biotechnological alternative to food safety. In this study, the antilisterial compounds produced by Enterococcus isolates from the Patagonian environment and their effectiveness for the control of Listeria monocytogenes in a food model were stu...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-020-02118-0
更新日期：2021-01-02 00:00:00
abstract：:Microorganisms have evolved themselves to thrive under various extreme environmental conditions such as extremely high or low temperature, alkalinity, and salinity. These microorganisms adapted several metabolic processes to survive and reproduce efficiently under such extreme environments. As the major proportion of ...
journal_title：Archives of microbiology
pub_type： 杂志文章,评审
doi：10.1007/s00203-018-1602-3
更新日期：2019-01-01 00:00:00
abstract：:Among proteins specifically found in most gram-positive bacteria of the phylum Firmicutes, conserved proteins of the family pfam06177-DUF988-COG4708 are of unknown function. The citrulline cluster-linked (ccl) gene of Lactobacillus plantarum codes one such protein and is adjacent to the citrulline biosynthesis operon ...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-005-0774-9
更新日期：2005-08-01 00:00:00
abstract：:In order to investigate the role of the putative epimerase function of the beta-oxidation multienzyme complex (FadBA) in the provision of (R)-3-hydroxyacyl-CoA thioesters for medium-chain-length polyhydroxyalkanoate (PHA(MCL)) biosynthesis, the fadBA(Po) operon of Pseudomonas oleovorans was cloned and characterized. T...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-002-0444-0
更新日期：2002-08-01 00:00:00
abstract：:The proteins in the culture supernatant (exoproteins) from Streptococcus pyogenes serotype M1 were separated by two-dimensional gel electrophoresis, and their N-terminal amino acid sequences were determined. The amino acid sequences were compared to sequences in the S. pyogenes genome database. The coding sequence sho...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-002-0412-8
更新日期：2002-06-01 00:00:00
abstract：:The bacteriocinogenic strain of Enterococcus faecalis EJ97 has been isolated from municipal waste water. It produces a cationic bacteriocin (enterocin EJ97) of low molecular mass (5,340 Da) that is very stable under mild heat conditions and is sensitive to proteolytic enzymes. The amino acid sequence of the first 18 N...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s002030050678
更新日期：1998-12-01 00:00:00
abstract：:Hopane glycolipid, isolated from Bacillus acidocaldarius, was studied in its ability to support growth from Mycoplasma mycoides var. capri as substitute for sterols. All attempts to culture Mycoplasma on hopane glycolipid failed. When added together with cholesterol, the effect of HGL was a reduction in growth rate. T...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/BF00413519
更新日期：1982-12-01 00:00:00
abstract：:Elevation gradients, often regarded as "natural experiments or laboratories", can be used to study changes in the distribution of microbial diversity related to changes in environmental conditions that typically occur over small geographical scales. We exploited this feature by characterizing fungal composition and di...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-020-01948-2
更新日期：2020-10-01 00:00:00
abstract：:The acidic amino acids (Asp, Glu) and their amides (Asn, Gln) support rapid growth of a variety of Pseudomonas strains when provided as the sole source of carbon and nitrogen. All key enzymes of glutamate metabolism were detected in P. fluorescence, with glutaminase and asparaginase showing the highest specific activi...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-002-0511-6
更新日期：2003-03-01 00:00:00
abstract：:An alkaliphilic actinobacterial strain, designated Hz 6-5T, was isolated from saline-alkaline soil from Songnen Plain in north-eastern China. The isolate formed light yellow-colored colonies and its cells were Gram-staining positive, non-motile, and non-spore-forming short rods. The strain was aerobic with optimal gro...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-020-02073-w
更新日期：2020-10-26 00:00:00
abstract：:RpoS, the alternative sigma factor sigma(s), is important for bacterial survival under extreme conditions. Many enterobacteria are opportunistic human pathogens and their ability to survive in a changing environment could be an essential step for their virulence. To determine the presence of this gene in enteric bacte...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s002030100277
更新日期：2001-06-01 00:00:00
abstract：:Periodontal diseases are infectious polymicrobial inflammatory diseases that lead to destruction of the periodontal ligament, gingiva, and alveolar bone. Sequential colonization of a broad range of bacteria, including Fusobacterium nucleatum and Porphyromonas gingivalis, is an important phenomenon in this disease mode...
journal_title：Archives of microbiology
pub_type： 杂志文章
doi：10.1007/s00203-016-1223-7
更新日期：2016-08-01 00:00:00
