Adaptive mutation F772S-enhanced p7-NS4A cooperation facilitates the assembly and release of hepatitis C virus and is associated with lipid droplet enlargement.

Abstract:

:Hepatitis C virus (HCV) infection is a major cause of chronic hepatitis and liver cancer worldwide. Adaptive mutations play important roles in the development of the HCV replicon and its infectious clones. We and others have previously identified the p7 mutation F772S and the co-presence of NS4A mutations in infectious HCV full-length clones and chimeric recombinants. However, the underlying mechanism of F772S function remains incompletely understood. Here, we investigated the functional role of F772S using an efficient JFH1-based reporter virus with Core-NS2 from genotype 2a strain J6, and we designated J6-p7/JFH1-4A according to the strain origin of the p7 and NS4A sequences. We found that replacing JFH1-4A with J6-4A (wild-type or mutated NS4A) or genotype 2b J8-4A severely attenuated the viability of J6-p7/JFH1-4A. However, passage-recovered viruses that contained J6-p7 all acquired F772S. Introduction of F772S efficiently rescued the viral spread and infectivity titers of J6-p7/J6-4A, which reached the levels of the original J6-p7/JFH1-4A and led to a concomitant increase in RNA replication, assembly and release of viruses with J6-specific p7 and NS4A. These data suggest that an isolate-specific cooperation existed between p7 and NS4A. NS4A exchange- or substitution-mediated viral attenuation was attributed to the RNA sequence, and no p7-NS4A protein interaction was detected. Moreover, we found that F772S-enhanced p7-NS4A cooperation was associated with the enlargement of intracellular lipid droplets. This study therefore provides new insights into the mechanisms of adaptive mutations and facilitates studies on the HCV life cycle and virus-host interaction.

journal_name

Emerg Microbes Infect

authors

Duan X,Anwar MI,Xu Z,Ma L,Yuan G,Chen Y,Liu X,Xia J,Zhou Y,Li YP

doi

10.1038/s41426-018-0140-z

subject

Has Abstract

pub_date

2018-08-08 00:00:00

pages

143

issue

1

issn

2222-1751

pii

10.1038/s41426-018-0140-z

journal_volume

7

pub_type

杂志文章
  • Novel reassortant of H1N1 swine influenza virus detected in pig population in Russia.

    abstract::Pigs play an important role in interspecies transmission of the influenza virus, particularly as "mixing vessels" for reassortment. Two influenza A/H1N1 virus strains, A/swine/Siberia/1sw/2016 and A/swine/Siberia/4sw/2017, were isolated during a surveillance of pigs from private farms in Russia from 2016 to 2017. Ther...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2019.1673136

    authors: Sobolev I,Kurskaya O,Leonov S,Kabilov M,Alikina T,Alekseev A,Yushkov Y,Saito T,Uchida Y,Mine J,Shestopalov A,Sharshov K

    更新日期:2019-01-01 00:00:00

  • Characterization of highly virulent community-associated methicillin-resistant Staphylococcus aureus ST9-SCCmec XII causing bloodstream infection in China.

    abstract::Previous studies have shown that livestock (LA)-MRSA ST398 evolved from a human-adapted methicillin-susceptible S. aureus (MSSA) clone. However, detailed information regarding ST9 is still unclear. Here, we characterized a community-associated methicillin-resistant Staphylococcus aureus (CA-MRSA) ST9-SCCmec XII isolat...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2020.1848354

    authors: Jin Y,Yu X,Chen Y,Chen W,Shen P,Luo Q,Zhang S,Kong X,Zheng B,Xiao Y

    更新日期:2020-12-01 00:00:00

  • Emergence of multidrug-resistant Mycobacterium tuberculosis of the Beijing lineage in Portugal and Guinea-Bissau: a snapshot of moving clones by whole-genome sequencing.

    abstract::The Beijing genotype comprises a highly disseminated strain type that is frequently associated with multidrug resistant (MDR) tuberculosis (TB) and increased transmissibility but, countries such as Portugal and Guinea-Bissau fall outside the regions phylogeographically associated with this specific genotype. Neverthel...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2020.1774425

    authors: Perdigão J,Silva C,Maltez F,Machado D,Miranda A,Couto I,Rabna P,Florez de Sessions P,Phelan J,Pain A,McNerney R,Hibberd ML,Mokrousov I,Clark TG,Viveiros M,Portugal I

    更新日期:2020-12-01 00:00:00

  • A novel norovirus GII.17 lineage contributed to adult gastroenteritis in Shanghai, China, during the winter of 2014–2015.

    abstract::Norovirus (NoV) is now recognized as a leading cause of nonbacterial acute gastroenteritis; however, the NoV GII.17 genotype has rarely been reported as the predominant genotype in clinical diarrhea cases. During the winter of 2014–2015, the GII.17 genotype, together with the NoV GII.4 genotype, dominated in sporadic ...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1038/emi.2015.67

    authors: Chen H,Qian F,Xu J,Chan M,Shen Z,Zai S,Shan M,Cai J,Zhang W,He J,Liu Y,Zhang J,Yuan Z,Zhu Z,Hu Y

    更新日期:2015-11-01 00:00:00

  • Characterization of swine-origin H1N1 canine influenza viruses.

    abstract::Host switch events of influenza A viruses (IAVs) continuously pose a zoonotic threat to humans. In 2013, swine-origin H1N1 IAVs emerged in dogs soon after they were detected in swine in the Guangxi province of China. This host switch was followed by multiple reassortment events between these H1N1 and previously circul...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2019.1637284

    authors: Wang G,Dos Anjos Borges LG,Stadlbauer D,Ramos I,Bermúdez González MC,He J,Ding Y,Wei Z,Ouyang K,Huang W,Simon V,Fernandez-Sesma A,Krammer F,Nelson MI,Chen Y,García-Sastre A

    更新日期:2019-01-01 00:00:00

  • Diversity and role of cave-dwelling hematophagous insects in pathogen transmission in the Afrotropical region.

    abstract::The progressive anthropization of caves for food resources or economic purposes increases human exposure to pathogens that naturally infect cave-dwelling animals. The presence of wild or domestic animals in the immediate surroundings of caves also may contribute to increasing the risk of emergence of such pathogens. S...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章,评审

    doi:10.1038/emi.2017.6

    authors: Obame-Nkoghe J,Leroy EM,Paupy C

    更新日期:2017-04-12 00:00:00

  • Genomic epidemiology of erythromycin-resistant Bordetella pertussis in China.

    abstract::Macrolides such as erythromycin are the empirical treatment of Bordetella pertussis infections. China has experienced an increase in erythromycin-resistant B. pertussis isolates since they were first reported in 2013. Here, we undertook a genomic study on Chinese B. pertussis isolates from 2012 to 2015 to elucidate th...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2019.1587315

    authors: Xu Z,Wang Z,Luan Y,Li Y,Liu X,Peng X,Octavia S,Payne M,Lan R

    更新日期:2019-01-01 00:00:00

  • A host-based whole genome sequencing study reveals novel risk loci associated with severity of influenza A(H1N1)pdm09 infection.

    abstract::Influenza A(H1N1)pdm09 virus has remained in a seasonal circulation since being recognized in 2009. Although it followed a mild course in most patients, in others it caused a series of severe clinical illnesses. Epidemiologic studies have implicated that host factors have a major influence on the disease severity of i...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2020.1870412

    authors: Li M,Chen Y,Chen T,Hu S,Chen L,Shen L,Li F,Yang J,Sun Y,Wang D,He L,Qin S,Shu Y

    更新日期:2021-12-01 00:00:00

  • Direct evidence of an extra-intestinal cycle of Toxoplasma gondii in tigers (Panthera tigris) by isolation of viable strains.

    abstract::Toxoplasmosis is one of the most common zoonotic diseases in the world. Felines excrete environmentally resistant Toxoplasma gondii oocysts. However, there is no direct evidence to prove tigers are the intermediate host of T. gondii. Here, we show that, IgG antibodies to T. gondii in 80% (8/10) of captive tigers. Two ...

    journal_title:Emerging microbes & infections

    pub_type: 信件

    doi:10.1080/22221751.2019.1682471

    authors: Yang Y,Dong H,Su R,Jiang N,Li T,Su C,Yuan Z,Zhang L

    更新日期:2019-01-01 00:00:00

  • Laboratory diagnosis of emerging human coronavirus infections - the state of the art.

    abstract::The three unprecedented outbreaks of emerging human coronavirus (HCoV) infections at the beginning of the twenty-first century have highlighted the necessity for readily available, accurate and fast diagnostic testing methods. The laboratory diagnostic methods for human coronavirus infections have evolved substantiall...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章,评审

    doi:10.1080/22221751.2020.1745095

    authors: Loeffelholz MJ,Tang YW

    更新日期:2020-12-01 00:00:00

  • Shotgun proteomics analysis of SARS-CoV-2-infected cells and how it can optimize whole viral particle antigen production for vaccines.

    abstract::Severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) has resulted in a pandemic and is continuing to spread rapidly around the globe. No effective vaccine is currently available to prevent COVID-19, and intense efforts are being invested worldwide into vaccine development. In this context, all technolo...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2020.1791737

    authors: Grenga L,Gallais F,Pible O,Gaillard JC,Gouveia D,Batina H,Bazaline N,Ruat S,Culotta K,Miotello G,Debroas S,Roncato MA,Steinmetz G,Foissard C,Desplan A,Alpha-Bazin B,Almunia C,Gas F,Bellanger L,Armengaud J

    更新日期:2020-12-01 00:00:00

  • Comparative epidemiology of Middle East respiratory syndrome coronavirus (MERS-CoV) in Saudi Arabia and South Korea.

    abstract::MERS-CoV infection emerged in the Kingdom of Saudi Arabia (KSA) in 2012 and has spread to 26 countries. However, 80% of all cases have occurred in KSA. The largest outbreak outside KSA occurred in South Korea (SK) in 2015. In this report, we describe an epidemiological comparison of the two outbreaks. Data from 1299 c...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1038/emi.2017.40

    authors: Chen X,Chughtai AA,Dyda A,MacIntyre CR

    更新日期:2017-06-07 00:00:00

  • Emerging colistin resistance in Salmonella enterica serovar Newport isolates from human infections.

    abstract::Worldwide emergence of Salmonella enterica serovar Newport (S. Newport) infection in humans, in parallel with a significant increasing prevalence of antimicrobial resistance (AR), is a serious public health concern. However, the prevalence of S. Newport resistance in China remains largely unknown. A retrospective stud...

    journal_title:Emerging microbes & infections

    pub_type: 信件

    doi:10.1080/22221751.2020.1733439

    authors: Elbediwi M,Pan H,Biswas S,Li Y,Yue M

    更新日期:2020-03-03 00:00:00

  • Converting monoclonal antibody-based immunotherapies from passive to active: bringing immune complexes into play.

    abstract::Monoclonal antibodies (mAbs), which currently constitute the main class of biotherapeutics, are now recognized as major medical tools that are increasingly being considered to fight severe viral infections. Indeed, the number of antiviral mAbs developed in recent years has grown exponentially. Although their direct ef...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章,评审

    doi:10.1038/emi.2016.97

    authors: Lambour J,Naranjo-Gomez M,Piechaczyk M,Pelegrin M

    更新日期:2016-08-17 00:00:00

  • Novel FKS1 and FKS2 modifications in a high-level echinocandin resistant clinical isolate of Candida glabrata.

    abstract::Echinocandin resistance in Candida glabrata poses a serious clinical challenge. The underlying resistance mechanism of a pan-echinocandin-resistant C. glabrata isolate (strain L74) was investigated in this study. FKS mutants carrying specific mutations found in L74 were reconstructed by the Alt-R CRISPR-Cas9 system (F...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2019.1684209

    authors: Hou X,Healey KR,Shor E,Kordalewska M,Ortigosa CJ,Paderu P,Xiao M,Wang H,Zhao Y,Lin LY,Zhang YH,Li YZ,Xu YC,Perlin DS,Zhao Y

    更新日期:2019-01-01 00:00:00

  • mRNA and miRNA profiling of Zika virus-infected human umbilical cord mesenchymal stem cells identifies miR-142-5p as an antiviral factor.

    abstract::Zika virus (ZIKV) infection during pregnancy is associated with congenital brain abnormalities, a finding that highlights the urgent need to understand mother-to-fetus transmission mechanisms. Human umbilical cord mesenchymal stem cells (hUCMSCs) are susceptible to ZIKV infection but the underlying mechanisms of viral...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2020.1821581

    authors: Seong RK,Lee JK,Cho GJ,Kumar M,Shin OS

    更新日期:2020-12-01 00:00:00

  • Penaeidins restrict white spot syndrome virus infection by antagonizing the envelope proteins to block viral entry.

    abstract::Emerging studies have indicated that some penaeidins restrict virus infection; however, the mechanism(s) involved are poorly understood. In the present study, we uncovered that penaeidins are a novel family of antiviral effectors against white spot syndrome virus (WSSV), which antagonize the envelope proteins to block...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2020.1729068

    authors: Xiao B,Fu Q,Niu S,Zhu P,He J,Li C

    更新日期:2020-12-01 00:00:00

  • Comparison of the genotypic and phenotypic properties of HIV-1 standard subtype B and subtype B/B' env molecular clones derived from infections in China.

    abstract::Although a number of standardized human immunodeficiency virus 1 (HIV-1) pseudoviruses have been generated to assess neutralizing antibodies, subtype B/B' has not been comprehensively characterized either genotypically or phenotypically. Full-length env genes were isolated from plasma samples derived from B/B'-infecte...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1038/s41426-018-0087-0

    authors: Xie H,Nie J,Chen Q,Huang W,Wang Y

    更新日期:2018-05-16 00:00:00

  • Occult HBV infection in Chinese blood donors: role of N-glycosylation mutations and amino acid substitutions in S protein transmembrane domains.

    abstract::Occult hepatitis B virus infection (OBI) is a low-level asymptomatic phase of HBV infection. Evidence of OBI clinical relevance is emerging but the mechanisms of its occurrence remain unclear. In this study, the molecular characteristics of 97 confirmed OBI from Chinese blood donors were analyzed and relevant mutation...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2019.1663130

    authors: Zhang L,Chang L,Laperche S,Ji H,Zhao J,Jiang X,Wang L,Candotti D

    更新日期:2019-01-01 00:00:00

  • Adaptive mutation in influenza A virus non-structural gene is linked to host switching and induces a novel protein by alternative splicing.

    abstract::Little is known about the processes that enable influenza A viruses to jump into new host species. Here we show that the non-structural protein1 nucleotide substitution, A374G, encoding the D125G(GAT→GGT) mutation, which evolved during the adaptation of a human virus within a mouse host, activates a novel donor splice...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1038/emi.2012.38

    authors: Selman M,Dankar SK,Forbes NE,Jia JJ,Brown EG

    更新日期:2012-11-01 00:00:00

  • Attenuated SARS-CoV-2 variants with deletions at the S1/S2 junction.

    abstract::The emergence of SARS-CoV-2 has led to the current global coronavirus pandemic and more than one million infections since December 2019. The exact origin of SARS-CoV-2 remains elusive, but the presence of a distinct motif in the S1/S2 junction region suggests the possible acquisition of cleavage site(s) in the spike p...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2020.1756700

    authors: Lau SY,Wang P,Mok BW,Zhang AJ,Chu H,Lee AC,Deng S,Chen P,Chan KH,Song W,Chen Z,To KK,Chan JF,Yuen KY,Chen H

    更新日期:2020-12-01 00:00:00

  • Bordetella pertussis pertactin knock-out strains reveal immunomodulatory properties of this virulence factor.

    abstract::Whooping cough, caused by Bordetella pertussis, has resurged and presents a global health burden worldwide. B. pertussis strains unable to produce the acellular pertussis vaccine component pertactin (Prn), have been emerging and in some countries represent up to 95% of recent clinical isolates. Knowledge on the effect...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1038/s41426-018-0039-8

    authors: Hovingh ES,Mariman R,Solans L,Hijdra D,Hamstra HJ,Jongerius I,van Gent M,Mooi F,Locht C,Pinelli E

    更新日期:2018-03-21 00:00:00

  • Detection and characterization of tigecycline heteroresistance in E. cloacae: clinical and microbiological findings.

    abstract::Tigecycline is regarded as a last-resort treatment for carbapenem-resistant Enterobacteriaceae (CRE), however, the emergence of tigecycline heteroresistance has posted the therapeutic challenge to combat this "nightmare bacteria". The primary purpose of this study was to demonstrate the existence of tigecycline hetero...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2019.1601031

    authors: Liu H,Jia X,Zou H,Sun S,Li S,Wang Y,Xia Y

    更新日期:2019-01-01 00:00:00

  • Tree shrew as a new animal model to study the pathogenesis of avian influenza (H9N2) virus infection.

    abstract::Outbreaks of avian influenza virus continue to pose threats to human health. Animal models such as the mouse, ferret, and macaque are used to understand the pathogenesis of avian influenza virus infection in humans. We previously reported that the tree shrew (Tupaia belangeri, family Tupaiidae), which is regarded as a...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1038/s41426-018-0167-1

    authors: Li R,Yuan B,Xia X,Zhang S,Du Q,Yang C,Li N,Zhao J,Zhang Y,Zhang R,Feng Y,Jiao J,Peiris M,Zhong N,Mok CKP,Yang Z

    更新日期:2018-10-10 00:00:00

  • Emergence of human babesiosis along the border of China with Myanmar: detection by PCR and confirmation by sequencing.

    abstract::Babesiosis is a tick-borne, zoonotic disease caused by Babesia spp. Two cases of babesiosis were detected by nested polymerase chain reaction (PCR) in Yunnan province, China, and further confirmed by molecular assay. The blood smears showed intraerythrocytic ring form and tetrads typical of small B. microti. In both c...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1038/emi.2014.55

    authors: Zhou X,Li SG,Wang JZ,Huang JL,Zhou HJ,Chen JH,Zhou XN

    更新日期:2014-08-01 00:00:00

  • Silent geographical spread of the H7N9 virus by online knowledge analysis of the live bird trade with a distributed focused crawler.

    abstract::Unlike those infected by H5N1, birds infected by the newly discovered H7N9 virus have no observable clinical symptoms. Public health workers in China do not know where the public health threat lies. In this study, we used a distributed focused crawler to analyze online knowledge of the live bird trade in first-wave pr...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1038/emi.2013.91

    authors: Chen C,Lu S,Du P,Wang H,Yu W,Song H,Xu J

    更新日期:2013-12-01 00:00:00

  • Cumulative acquisition of pathogenicity islands has shaped virulence potential and contributed to the emergence of LEE-negative Shiga toxin-producing Escherichia coli strains.

    abstract::Shiga toxin-producing Escherichia coli (STEC) are foodborne pathogens causing severe gastroenteritis, which may lead to hemolytic uremic syndrome. The Locus of Enterocyte Effacement (LEE), a Pathogenicity Island (PAI), is a major determinant of intestinal epithelium attachment of a group of STEC strains; however, the ...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2019.1595985

    authors: Montero DA,Canto FD,Velasco J,Colello R,Padola NL,Salazar JC,Martin CS,Oñate A,Blanco J,Rasko DA,Contreras C,Puente JL,Scheutz F,Franz E,Vidal RM

    更新日期:2019-01-01 00:00:00

  • Cross-reactive antibodies binding to H4 hemagglutinin protect against a lethal H4N6 influenza virus challenge in the mouse model.

    abstract::Influenza viruses of the H4 subtype are widespread in wild birds, circulate in domestic poultry, readily infect mammals, and tolerate the insertion of a polybasic cleavage site. In addition, serological evidence suggests that humans working with poultry are exposed to these viruses. While H4 viruses are not of immedia...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章

    doi:10.1080/22221751.2018.1564369

    authors: Amanat F,Meade P,Strohmeier S,Krammer F

    更新日期:2019-01-01 00:00:00

  • Targeting intracellular signaling as an antiviral strategy: aerosolized LASAG for the treatment of influenza in hospitalized patients.

    abstract::Influenza has been a long-running health problem and novel antiviral drugs are urgently needed. In pre-clinical studies, we demonstrated broad antiviral activity of D, L-lysine-acetylsalicylate glycine (LASAG) against influenza virus (IV) in cell culture and protection against lethal challenge in mice. LASAG is a comp...

    journal_title:Emerging microbes & infections

    pub_type: 杂志文章,多中心研究,随机对照试验

    doi:10.1038/s41426-018-0023-3

    authors: Scheuch G,Canisius S,Nocker K,Hofmann T,Naumann R,Pleschka S,Ludwig S,Welte T,Planz O

    更新日期:2018-03-07 00:00:00

  • Human pathogenic Mycobacterium kansasii (former subtype Ⅰ) with zoonotic potential isolated from a diseased indoor pet cat, Japan.

    abstract::Nontuberculous mycobacterial (NTM) infections in humans have increased in prevalence in recent decades. Mycobacterium kansasii is one of the most prevalent human pathogenic NTM species worldwide. Herein, we report the first isolation of M. kansasii from an indoor domestic cat in Japan. Comparative genome sequence anal...

    journal_title:Emerging microbes & infections

    pub_type: 信件

    doi:10.1080/22221751.2021.1878935

    authors: Fukano H,Terazono T,Hirabayashi A,Yoshida M,Suzuki M,Wada S,Ishii N,Hoshino Y

    更新日期:2021-01-19 00:00:00